Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 19 665 NP_036462 19 665 NP_001243397 19 665 XP_005269721 19 665 NP_006763 19 869 NP_004512 17 2528 NP_004230 17 2528 XP_005268271 17 2528 XP_005268270 17 2528 XP_006720384 17 2528 NP_940966 17 4312 NP_001242941 17 4312 NP_848599 17 4312 NP_005955 17 4312 NP_001243024 17 4312 XP_005256710 17 4312 XP_005256709 17 4312 XP_005256708 17 4312 XP_006713081 17 4312 NP_115523 16 5631 NP_001035862 16 5631 NP_001265322 16 5631 XP_006719692 16 5631 XP_006719691 16 5631 XP_005269230 16 5631 XP_005269231 16 5631 XP_005269229 16 5631 NP_000126 16 7355 NP_001278017 16 7355 NP_114157 16 7355 NP_001092301 16 7355 NP_849154 16 7355 NP_078891 16 7355 NP_001018122 16 7355 NP_001171526 16 7355 NP_001171527 16 7355 NP_001273096 16 7355 NP_001139373 16 7355 NP_060297 16 7355 NP_001257405 16 7355 NP_001193856 16 7355 NP_006236 16 7355 NP_851308 16 7355 NP_851307 16 7355 XP_006723474 16 7355 XP_005259362 16 7355 XP_005256351 16 7355 XP_006721230 16 7355 XP_005250740 16 7355 XP_006715067 16 7355 XP_005248654 16 7355 XP_005248653 16 7355 NP_004320 15 9605 NP_057712 15 9605 NP_567823 15 9605 NP_001257711 15 9605 NP_003192 15 9605 NP_001275913 15 9605 NP_060585 15 9605 XP_005252516 15 9605 XP_005252514 15 9605 XP_005252511 15 9605 XP_005263162 15 9605 XP_005263159 15 9605>NP_001243398 Length = 1781 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NKLLRRTIE 9 NKLLRR IE Sbjct: 108 NKLLRRAIE 116>NP_036462 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NKLLRRTIE 9 NKLLRR IE Sbjct: 108 NKLLRRAIE 116>NP_001243397 Length = 1890 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NKLLRRTIE 9 NKLLRR IE Sbjct: 108 NKLLRRAIE 116>XP_005269721 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NKLLRRTIE 9 NKLLRR IE Sbjct: 108 NKLLRRAIE 116>NP_006763 Length = 1343 Score = 18.9 bits (37), Expect = 869 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 NKLLRRTI 8 NKLLRRT+ Sbjct: 79 NKLLRRTV 86>NP_004512 Length = 963 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NKLLRRTIE 9 NK+LR TI+ Sbjct: 351 NKILRNTIQ 359>NP_004230 Length = 1979 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NKLLRRTIE 9 N++LR+TIE Sbjct: 841 NEILRQTIE 849>XP_005268271 Length = 1537 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NKLLRRTIE 9 N++LR+TIE Sbjct: 399 NEILRQTIE 407>XP_005268270 Length = 1950 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NKLLRRTIE 9 N++LR+TIE Sbjct: 812 NEILRQTIE 820>XP_006720384 Length = 1978 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NKLLRRTIE 9 N++LR+TIE Sbjct: 840 NEILRQTIE 848>NP_940966 Length = 457 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLRRTIE 9 LLRRT+E Sbjct: 303 LLRRTVE 309>NP_001242941 Length = 2007 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 NKL+RRT Sbjct: 1872 NKLVRRT 1878>NP_848599 Length = 3092 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLRRTIE 9 LLRRT+E Sbjct: 303 LLRRTVE 309>NP_005955 Length = 1976 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 NKL+RRT Sbjct: 1841 NKLVRRT 1847>NP_001243024 Length = 1985 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 NKL+RRT Sbjct: 1850 NKLVRRT 1856>XP_005256710 Length = 1986 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 NKL+RRT Sbjct: 1851 NKLVRRT 1857>XP_005256709 Length = 1997 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 NKL+RRT Sbjct: 1862 NKLVRRT 1868>XP_005256708 Length = 2007 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 NKL+RRT Sbjct: 1872 NKLVRRT 1878>XP_006713081 Length = 3964 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLRRTIE 9 LLRRT+E Sbjct: 303 LLRRTVE 309>NP_115523 Length = 712 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLRRTI 8 KLLRRT+ Sbjct: 96 KLLRRTL 102>NP_001035862 Length = 712 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLRRTI 8 KLLRRT+ Sbjct: 96 KLLRRTL 102>NP_001265322 Length = 712 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLRRTI 8 KLLRRT+ Sbjct: 96 KLLRRTL 102>XP_006719692 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLRRTI 8 KLLRRT+ Sbjct: 96 KLLRRTL 102>XP_006719691 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLRRTI 8 KLLRRT+ Sbjct: 96 KLLRRTL 102>XP_005269230 Length = 743 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLRRTI 8 KLLRRT+ Sbjct: 96 KLLRRTL 102>XP_005269231 Length = 743 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLRRTI 8 KLLRRT+ Sbjct: 96 KLLRRTL 102>XP_005269229 Length = 743 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLRRTI 8 KLLRRT+ Sbjct: 96 KLLRRTL 102>NP_000126 Length = 1455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NKLLRRTIE 9 N LRRT+E Sbjct: 250 NSDLRRTVE 258>NP_001278017 Length = 2912 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLRRTIE 9 +LRRT+E Sbjct: 2509 ILRRTVE 2515>NP_114157 Length = 2873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLRRTIE 9 +LRRT+E Sbjct: 2470 ILRRTVE 2476>NP_001092301 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NKLLRR 6 NKLLRR Sbjct: 119 NKLLRR 124>NP_849154 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NKLLRR 6 NKLLRR Sbjct: 119 NKLLRR 124>NP_078891 Length = 854 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 +KLLRRT Sbjct: 315 HKLLRRT 321>NP_001018122 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NKLLRRTIE 9 N LRRT+E Sbjct: 250 NSDLRRTVE 258>NP_001171526 Length = 854 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 +KLLRRT Sbjct: 315 HKLLRRT 321>NP_001171527 Length = 812 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 +KLLRRT Sbjct: 315 HKLLRRT 321>NP_001273096 Length = 1424 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NKLLRRTIE 9 N LRRT+E Sbjct: 250 NSDLRRTVE 258>NP_001139373 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NKLLRR 6 NKLLRR Sbjct: 250 NKLLRR 255>NP_060297 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NKLLRR 6 NKLLRR Sbjct: 248 NKLLRR 253>NP_001257405 Length = 451 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KLLRRTIE 9 +LL+RT+E Sbjct: 394 QLLKRTVE 401>NP_001193856 Length = 4707 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NKLLRRTI 8 N+LLRR I Sbjct: 3807 NQLLRRVI 3814>NP_006236 Length = 602 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KLLRRTIE 9 +LL+RT+E Sbjct: 545 QLLKRTVE 552>NP_851308 Length = 496 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KLLRRTIE 9 +LL+RT+E Sbjct: 439 QLLKRTVE 446>NP_851307 Length = 570 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KLLRRTIE 9 +LL+RT+E Sbjct: 513 QLLKRTVE 520>XP_006723474 Length = 2737 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLRRTIE 9 +LRRT+E Sbjct: 2334 ILRRTVE 2340>XP_005259362 Length = 2855 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLRRTIE 9 +LRRT+E Sbjct: 2452 ILRRTVE 2458>XP_005256351 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NKLLRRTIE 9 N LRRT+E Sbjct: 250 NSDLRRTVE 258>XP_006721230 Length = 1412 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NKLLRRTIE 9 N LRRT+E Sbjct: 250 NSDLRRTVE 258>XP_005250740 Length = 1053 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLRRTI 8 +LLRRTI Sbjct: 1043 RLLRRTI 1049>XP_006715067 Length = 4707 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NKLLRRTI 8 N+LLRR I Sbjct: 3807 NQLLRRVI 3814>XP_005248654 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 +KLLRRT Sbjct: 68 HKLLRRT 74>XP_005248653 Length = 895 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 +KLLRRT Sbjct: 356 HKLLRRT 362>NP_004320 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LRRTIE 9 LRRTIE Sbjct: 118 LRRTIE 123>NP_057712 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 NK+LRR+ Sbjct: 56 NKMLRRS 62>NP_567823 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 NK+LRR+ Sbjct: 56 NKMLRRS 62>NP_001257711 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLRRTIE 9 LLRRTI+ Sbjct: 198 LLRRTIK 204>NP_003192 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLRRTIE 9 LLRRTI+ Sbjct: 230 LLRRTIK 236>NP_001275913 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NKLLRRTI 8 +KLLR+T+ Sbjct: 33 DKLLRKTL 40>NP_060585 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NKLLRRTI 8 +KLLR+T+ Sbjct: 130 DKLLRKTL 137>XP_005252516 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 NK+LRR+ Sbjct: 62 NKMLRRS 68>XP_005252514 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 NK+LRR+ Sbjct: 11 NKMLRRS 17>XP_005252511 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NKLLRRT 7 NK+LRR+ Sbjct: 62 NKMLRRS 68>XP_005263162 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NKLLRRTI 8 +KLLR+T+ Sbjct: 33 DKLLRKTL 40>XP_005263159 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NKLLRRTI 8 +KLLR+T+ Sbjct: 105 DKLLRKTL 112Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.140 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 387,512 Number of extensions: 493 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |