Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 20 299 NP_060785 20 299 NP_361014 20 299 NP_001240658 16 7355 NP_001240657 16 7355 NP_001240656 16 7355 NP_001240659 16 7355 NP_001240662 16 7355 NP_001240661 16 7355 NP_067647 16 7355 NP_036265 16 7355 NP_001276962 16 7355 NP_057212 16 7355 NP_542401 16 7355 NP_001243089 15 9605 NP_079273 15 9605 NP_055314 15 9605 NP_722576 15 9605 NP_938147 15 9605 NP_077006 15 9605 XP_005262424 15 9605 XP_005262182 15 9605 XP_005262181 15 9605 XP_005261392 15 9605 XP_006721017 15 9605 XP_006721016 15 9605 XP_006712802 15 9605 XP_006712801 15 9605 XP_006712800 15 9605 NP_689639 15 9605>NP_001013433 Length = 589 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NKHQSAVT 8 NKHQSAVT Sbjct: 503 NKHQSAVT 510>NP_060785 Length = 627 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NKHQSAVT 8 NKHQSAVT Sbjct: 541 NKHQSAVT 548>NP_361014 Length = 707 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NKHQSAVT 8 NKHQSAVT Sbjct: 621 NKHQSAVT 628>NP_001240658 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HQSAVT 8 HQSA+T Sbjct: 559 HQSAIT 564>NP_001240657 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HQSAVT 8 HQSA+T Sbjct: 574 HQSAIT 579>NP_001240656 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HQSAVT 8 HQSA+T Sbjct: 634 HQSAIT 639>NP_001240659 Length = 626 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HQSAVT 8 HQSA+T Sbjct: 476 HQSAIT 481>NP_001240662 Length = 601 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HQSAVT 8 HQSA+T Sbjct: 451 HQSAIT 456>NP_001240661 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HQSAVT 8 HQSA+T Sbjct: 475 HQSAIT 480>NP_067647 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HQSAVT 8 HQSA+T Sbjct: 607 HQSAIT 612>NP_036265 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KHQSAVT 8 KH SAVT Sbjct: 317 KHPSAVT 323>NP_001276962 Length = 726 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KHQSAVT 8 KH SAVT Sbjct: 317 KHPSAVT 323>NP_057212 Length = 874 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KHQSAVT 8 KH SAVT Sbjct: 317 KHPSAVT 323>NP_542401 Length = 324 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KHQSAVTR 9 KH S++TR Sbjct: 272 KHGSSITR 279>NP_001243089 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NKHQSAVTR 9 ++HQ+ VTR Sbjct: 145 SEHQTNVTR 153>NP_079273 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NKHQSAVTR 9 ++HQ+ VTR Sbjct: 145 SEHQTNVTR 153>NP_055314 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NKHQSAVTR 9 ++H S+VTR Sbjct: 317 SRHGSSVTR 325>NP_722576 Length = 3080 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KHQSAVTR 9 K QSAVT+ Sbjct: 392 KSQSAVTK 399>NP_938147 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NKHQSAVTR 9 ++H S+VTR Sbjct: 317 SRHGSSVTR 325>NP_077006 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NKHQSAV 7 NKH SAV Sbjct: 345 NKHISAV 351>XP_005262424 Length = 2875 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KHQSAVTR 9 K QSAVT+ Sbjct: 187 KSQSAVTK 194>XP_005262182 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NKHQSAVTR 9 ++H S+VTR Sbjct: 317 SRHGSSVTR 325>XP_005262181 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NKHQSAVTR 9 ++H S+VTR Sbjct: 334 SRHGSSVTR 342>XP_005261392 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KHQSAVTR 9 KH SAV R Sbjct: 43 KHHSAVFR 50>XP_006721017 Length = 366 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NKHQSAVTR 9 ++HQ+ VTR Sbjct: 145 SEHQTNVTR 153>XP_006721016 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NKHQSAVTR 9 ++HQ+ VTR Sbjct: 145 SEHQTNVTR 153>XP_006712802 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NKHQSAV 7 NKH SAV Sbjct: 345 NKHISAV 351>XP_006712801 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NKHQSAV 7 NKH SAV Sbjct: 345 NKHISAV 351>XP_006712800 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NKHQSAV 7 NKH SAV Sbjct: 305 NKHISAV 311>NP_689639 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KHQSAVTR 9 KH SAV R Sbjct: 239 KHHSAVFR 246Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.108 0.286 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 495,637 Number of extensions: 401 Number of successful extensions: 30 Number of sequences better than 10000.0: 30 Number of HSP's gapped: 30 Number of HSP's successfully gapped: 30 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |