Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001261 18 1135 XP_005271924 18 1135 XP_005271923 18 1135 NP_003600 17 3301 NP_001138502 17 4312 NP_001186092 16 7355 NP_002796 16 7355 XP_006722043 16 7355 NP_064647 15 9605 NP_004032 15 9605 NP_000858 15 9605 NP_038478 15 9605 NP_116100 15 9605 NP_001276904 15 9605 NP_443143 15 9605 NP_002350 15 9605 XP_006722442 15 9605 XP_006722345 15 9605 XP_005268117 15 9605 XP_005274055 15 9605 XP_005274054 15 9605 XP_006718618 15 9605 XP_006718617 15 9605 XP_006718616 15 9605 XP_006718615 15 9605 XP_006718052 15 9605 XP_006718051 15 9605 XP_005246577 15 9605 XP_006712545 15 9605 XP_006712537 15 9605 XP_005246557 15 9605 XP_006712535 15 9605 XP_006712532 15 9605 XP_006712531 15 9605 XP_006712530 15 9605 XP_006712529 15 9605 XP_006712528 15 9605 XP_006712527 15 9605 XP_005246549 15 9605 XP_006712526 15 9605 XP_006712525 15 9605 XP_005246546 15 9605 XP_006712524 15 9605 XP_005246545 15 9605 NP_112174 15 9605>NP_001261 Length = 1710 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NKATKSIKV 9 NKA KSIKV Sbjct: 1339 NKAMKSIKV 1347>XP_005271924 Length = 1710 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NKATKSIKV 9 NKA KSIKV Sbjct: 1339 NKAMKSIKV 1347>XP_005271923 Length = 1798 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NKATKSIKV 9 NKA KSIKV Sbjct: 1339 NKAMKSIKV 1347>NP_003600 Length = 556 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NKATKSIK 8 NK TKS+K Sbjct: 214 NKGTKSLK 221>NP_001138502 Length = 1692 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NKATKSIKV 9 N+AT++IKV Sbjct: 188 NEATQNIKV 196>NP_001186092 Length = 398 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KATKSIKV 9 +ATK+IKV Sbjct: 276 EATKNIKV 283>NP_002796 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KATKSIKV 9 +ATK+IKV Sbjct: 284 EATKNIKV 291>XP_006722043 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KATKSIKV 9 +ATK+IKV Sbjct: 284 EATKNIKV 291>NP_064647 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NKATKSIKV 9 NK K IK+ Sbjct: 225 NKTVKKIKI 233>NP_004032 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NKATKSIKV 9 NK K IK+ Sbjct: 225 NKTVKKIKI 233>NP_000858 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KATKSIK 8 +ATKS+K Sbjct: 400 RATKSVK 406>NP_038478 Length = 2168 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 673 NKTTSSVK 680>NP_116100 Length = 162 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NKATKSIKV 9 NK K++KV Sbjct: 5 NKGNKALKV 13>NP_001276904 Length = 2132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 671 NKTTSSVK 678>NP_443143 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NKATKSI 7 +KATKSI Sbjct: 77 DKATKSI 83>NP_002350 Length = 162 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NKATKSIKV 9 NK K++KV Sbjct: 5 NKGNKALKV 13>XP_006722442 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NKATKSI 7 +KATKSI Sbjct: 77 DKATKSI 83>XP_006722345 Length = 195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NKATKSIKV 9 NK K++KV Sbjct: 38 NKGNKALKV 46>XP_005268117 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NKATKSIK 8 NKA +SIK Sbjct: 230 NKADESIK 237>XP_005274055 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NKATKSIKV 9 NK K IK+ Sbjct: 229 NKTVKKIKI 237>XP_005274054 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NKATKSIKV 9 NK K IK+ Sbjct: 229 NKTVKKIKI 237>XP_006718618 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NKATKSIKV 9 NK K IK+ Sbjct: 220 NKTVKKIKI 228>XP_006718617 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NKATKSIKV 9 NK K IK+ Sbjct: 229 NKTVKKIKI 237>XP_006718616 Length = 443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NKATKSIKV 9 NK K IK+ Sbjct: 225 NKTVKKIKI 233>XP_006718615 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NKATKSIKV 9 NK K IK+ Sbjct: 229 NKTVKKIKI 237>XP_006718052 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KATKSIKV 9 K TKS+K+ Sbjct: 300 KNTKSVKI 307>XP_006718051 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KATKSIKV 9 K TKS+K+ Sbjct: 300 KNTKSVKI 307>XP_005246577 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KATKSIK 8 +ATKS+K Sbjct: 281 RATKSVK 287>XP_006712545 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KATKSIK 8 +ATKS+K Sbjct: 375 RATKSVK 381>XP_006712537 Length = 1952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_005246557 Length = 2095 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 554 NKTTSSVK 561>XP_006712535 Length = 2095 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 554 NKTTSSVK 561>XP_006712532 Length = 2141 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 671 NKTTSSVK 678>XP_006712531 Length = 2169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_006712530 Length = 2176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 671 NKTTSSVK 678>XP_006712529 Length = 2179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_006712528 Length = 2180 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_006712527 Length = 2203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_005246549 Length = 2212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 671 NKTTSSVK 678>XP_006712526 Length = 2212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 671 NKTTSSVK 678>XP_006712525 Length = 2212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_005246546 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_006712524 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_005246545 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NKATKSIK 8 NK T S+K Sbjct: 673 NKTTSSVK 680>NP_112174 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KATKSIKV 9 K TKS+K+ Sbjct: 300 KNTKSVKI 307Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.109 0.249 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 259,166 Number of extensions: 392 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |