Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_060719 18 1482 NP_001258968 18 1482 NP_001011649 18 1482 NP_001185761 18 1482 NP_071754 18 1482 NP_001185763 18 1482 NP_001002810 18 1482 NP_055459 18 1482 NP_008893 18 1482 NP_001171570 18 1482 NP_001007089 18 1482 NP_001182189 18 1482 NP_001002812 18 1482 NP_001182190 18 1482 XP_006717248 18 1482 XP_006717247 18 1482 XP_006717246 18 1482 XP_006717245 18 1482 XP_006717244 18 1482 XP_006717243 18 1482 XP_006717242 18 1482 XP_006711719 18 1482 XP_006711717 18 1482 XP_006711716 18 1482 XP_006711715 18 1482 XP_006711714 18 1482 XP_006711713 18 1482 XP_006711710 18 1482 XP_006711709 18 1482 NP_079524 17 4312 XP_006725425 17 4312 XP_006725424 17 4312 XP_006725423 17 4312 XP_006725422 17 4312 XP_006725421 17 4312 XP_006725420 17 4312 XP_006725419 17 4312 XP_006722186 17 4312 XP_006722185 17 4312 XP_006722184 17 4312 XP_006722183 17 4312 XP_006722182 17 4312 XP_006722181 17 4312 XP_006722180 17 4312 NP_005427 16 5631 NP_056509 16 7355 XP_005250038 16 7355 XP_005250037 16 7355 NP_055383 15 9605 NP_037522 15 9605 NP_001129292 15 9605 NP_056163 15 9605 XP_005276568 15 9605 XP_005276567 15 9605 XP_005255280 15 9605 XP_006717096 15 9605 XP_005251926 15 9605 XP_005263969 15 9605 XP_005263968 15 9605 XP_005263967 15 9605 XP_005263966 15 9605 NP_055113 15 9605>NP_060719 Length = 1893 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 103 NIELKVEVE 111>NP_001258968 Length = 1663 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 103 NIELKVEVE 111>NP_001011649 Length = 1814 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 103 NIELKVEVE 111>NP_001185761 Length = 2240 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 114 NIELKVEVE 122>NP_071754 Length = 310 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 185 NIELKVEVE 193>NP_001185763 Length = 2362 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 48 NIELKVEVE 56>NP_001002810 Length = 173 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 48 NIELKVEVE 56>NP_055459 Length = 2346 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 48 NIELKVEVE 56>NP_008893 Length = 639 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NIVLKVEVE 9 N++LK+EVE Sbjct: 74 NLILKLEVE 82>NP_001171570 Length = 639 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NIVLKVEVE 9 N++LK+EVE Sbjct: 74 NLILKLEVE 82>NP_001007089 Length = 620 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NIVLKVEVE 9 N++LK+EVE Sbjct: 55 NLILKLEVE 63>NP_001182189 Length = 141 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 16 NIELKVEVE 24>NP_001002812 Length = 969 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 48 NIELKVEVE 56>NP_001182190 Length = 176 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 51 NIELKVEVE 59>XP_006717248 Length = 1664 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 103 NIELKVEVE 111>XP_006717247 Length = 1670 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 103 NIELKVEVE 111>XP_006717246 Length = 1820 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 103 NIELKVEVE 111>XP_006717245 Length = 1861 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 103 NIELKVEVE 111>XP_006717244 Length = 1867 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 103 NIELKVEVE 111>XP_006717243 Length = 1889 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 93 NIELKVEVE 101>XP_006717242 Length = 1898 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 102 NIELKVEVE 110>XP_006711719 Length = 2302 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 114 NIELKVEVE 122>XP_006711717 Length = 2385 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 114 NIELKVEVE 122>XP_006711716 Length = 2411 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 114 NIELKVEVE 122>XP_006711715 Length = 2428 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 48 NIELKVEVE 56>XP_006711714 Length = 2429 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 48 NIELKVEVE 56>XP_006711713 Length = 2432 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 51 NIELKVEVE 59>XP_006711710 Length = 2494 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 114 NIELKVEVE 122>XP_006711709 Length = 2495 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NI LKVEVE Sbjct: 114 NIELKVEVE 122>NP_079524 Length = 1183 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 +VL+VEVE Sbjct: 789 VVLRVEVE 796>XP_006725425 Length = 1035 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 +VL+VEVE Sbjct: 643 VVLRVEVE 650>XP_006725424 Length = 1078 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 +VL+VEVE Sbjct: 643 VVLRVEVE 650>XP_006725423 Length = 1078 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 +VL+VEVE Sbjct: 643 VVLRVEVE 650>XP_006725422 Length = 1091 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 +VL+VEVE Sbjct: 740 VVLRVEVE 747>XP_006725421 Length = 1132 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 +VL+VEVE Sbjct: 740 VVLRVEVE 747>XP_006725420 Length = 1134 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 +VL+VEVE Sbjct: 699 VVLRVEVE 706>XP_006725419 Length = 1175 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 +VL+VEVE Sbjct: 740 VVLRVEVE 747>XP_006722186 Length = 1035 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 +VL+VEVE Sbjct: 643 VVLRVEVE 650>XP_006722185 Length = 1078 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 +VL+VEVE Sbjct: 643 VVLRVEVE 650>XP_006722184 Length = 1078 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 +VL+VEVE Sbjct: 643 VVLRVEVE 650>XP_006722183 Length = 1091 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 +VL+VEVE Sbjct: 740 VVLRVEVE 747>XP_006722182 Length = 1132 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 +VL+VEVE Sbjct: 740 VVLRVEVE 747>XP_006722181 Length = 1134 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 +VL+VEVE Sbjct: 699 VVLRVEVE 706>XP_006722180 Length = 1175 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 +VL+VEVE Sbjct: 740 VVLRVEVE 747>NP_005427 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 N VLK+E+E Sbjct: 70 NKVLKIELE 78>NP_056509 Length = 831 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 IV+K+EV+ Sbjct: 367 IVIKIEVQ 374>XP_005250038 Length = 831 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 IV+K+EV+ Sbjct: 367 IVIKIEVQ 374>XP_005250037 Length = 875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IVLKVEVE 9 IV+K+EV+ Sbjct: 411 IVIKIEVQ 418>NP_055383 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLKVEVE 9 VLKVEV+ Sbjct: 98 VLKVEVD 104>NP_037522 Length = 1383 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NIV++ EVE Sbjct: 491 NIVIQGEVE 499>NP_001129292 Length = 1320 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NIV++ EVE Sbjct: 428 NIVIQGEVE 436>NP_056163 Length = 1883 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IVLKVEVE 9 I+L VEVE Sbjct: 308 IILPVEVE 315>XP_005276568 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIVLKVEVE 9 + LKVEVE Sbjct: 193 DFALKVEVE 201>XP_005276567 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIVLKVEVE 9 + LKVEVE Sbjct: 194 DFALKVEVE 202>XP_005255280 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIVLKVEVE 9 + LKVEVE Sbjct: 194 DFTLKVEVE 202>XP_006717096 Length = 1217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NIV++ EVE Sbjct: 491 NIVIQGEVE 499>XP_005251926 Length = 1383 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NIVLKVEVE 9 NIV++ EVE Sbjct: 491 NIVIQGEVE 499>XP_005263969 Length = 1844 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IVLKVEVE 9 I+L VEVE Sbjct: 269 IILPVEVE 276>XP_005263968 Length = 1861 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IVLKVEVE 9 I+L VEVE Sbjct: 286 IILPVEVE 293>XP_005263967 Length = 1899 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IVLKVEVE 9 I+L VEVE Sbjct: 325 IILPVEVE 332>XP_005263966 Length = 1900 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IVLKVEVE 9 I+L VEVE Sbjct: 325 IILPVEVE 332>NP_055113 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIVLKVEVE 9 + LKVEVE Sbjct: 193 DFALKVEVE 201Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.137 0.319 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 372,374 Number of extensions: 681 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |