Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 20 390 XP_006713721 20 390 NP_001714 17 3301 XP_005249383 17 3301 NP_001274268 17 4312 NP_001073138 17 4312 NP_112187 17 4312 NP_001274266 17 4312 NP_001274267 17 4312 NP_001124322 17 4312 NP_001124321 17 4312 NP_037490 17 4312 NP_057373 17 4312 NP_001186068 16 7355 NP_067032 16 7355 NP_001186067 16 7355 NP_055523 16 7355 NP_056150 16 7355 NP_004661 16 7355 NP_001015880 16 7355 XP_006719769 16 7355 XP_006719370 16 7355 XP_006719369 16 7355 XP_006719368 16 7355 XP_006712965 16 7355 NP_009044 15 9605 NP_001156806 15 9605 NP_620135 15 9605 NP_001156807 15 9605 NP_085125 15 9605 NP_001008781 15 9605 NP_001363 15 9605 NP_004653 15 9605>NP_006209 Length = 1068 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILNREIGF 9 ILNREIGF Sbjct: 112 ILNREIGF 119>XP_006713721 Length = 1068 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILNREIGF 9 ILNREIGF Sbjct: 112 ILNREIGF 119>NP_001714 Length = 2649 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NILNREIG 8 NI+N+E+G Sbjct: 2545 NIINKEMG 2552>XP_005249383 Length = 3186 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NILNREIG 8 NI+N+E+G Sbjct: 3082 NIINKEMG 3089>NP_001274268 Length = 337 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NILNREIG 8 NIL R+IG Sbjct: 103 NILRRQIG 110>NP_001073138 Length = 337 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NILNREIG 8 NIL R+IG Sbjct: 103 NILRRQIG 110>NP_112187 Length = 337 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NILNREIG 8 NIL R+IG Sbjct: 103 NILRRQIG 110>NP_001274266 Length = 337 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NILNREIG 8 NIL R+IG Sbjct: 103 NILRRQIG 110>NP_001274267 Length = 337 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NILNREIG 8 NIL R+IG Sbjct: 103 NILRRQIG 110>NP_001124322 Length = 341 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NILNREIG 8 NIL R+IG Sbjct: 104 NILRRQIG 111>NP_001124321 Length = 341 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NILNREIG 8 NIL R+IG Sbjct: 104 NILRRQIG 111>NP_037490 Length = 663 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NILNREIG 8 N+L RE+G Sbjct: 552 NVLKRELG 559>NP_057373 Length = 341 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NILNREIG 8 NIL R+IG Sbjct: 104 NILRRQIG 111>NP_001186068 Length = 1024 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NILNRE 6 N+LNRE Sbjct: 31 NVLNRE 36>NP_067032 Length = 1024 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NILNRE 6 N+LNRE Sbjct: 31 NVLNRE 36>NP_001186067 Length = 1024 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NILNRE 6 N+LNRE Sbjct: 31 NVLNRE 36>NP_055523 Length = 2209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NILNREI 7 N+LN+EI Sbjct: 855 NLLNKEI 861>NP_056150 Length = 2210 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ILNREIGF 9 I+NR++G+ Sbjct: 1167 IMNRKLGY 1174>NP_004661 Length = 614 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LNREIGF 9 LNR +GF Sbjct: 85 LNRNLGF 91>NP_001015880 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LNREIGF 9 LNR +GF Sbjct: 85 LNRNLGF 91>XP_006719769 Length = 2209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NILNREI 7 N+LN+EI Sbjct: 855 NLLNKEI 861>XP_006719370 Length = 2076 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ILNREIGF 9 I+NR++G+ Sbjct: 1033 IMNRKLGY 1040>XP_006719369 Length = 2200 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ILNREIGF 9 I+NR++G+ Sbjct: 1157 IMNRKLGY 1164>XP_006719368 Length = 2209 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ILNREIGF 9 I+NR++G+ Sbjct: 1166 IMNRKLGY 1173>XP_006712965 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NILNREIGF 9 N+L R+I F Sbjct: 2 NLLQRQIAF 10>NP_009044 Length = 1943 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NILNREIG 8 N+L RE G Sbjct: 35 NLLEREFG 42>NP_001156806 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NILNREIGF 9 ++++RE GF Sbjct: 273 SVISREYGF 281>NP_620135 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NILNREIGF 9 ++++RE GF Sbjct: 273 SVISREYGF 281>NP_001156807 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NILNREIGF 9 ++++RE GF Sbjct: 273 SVISREYGF 281>NP_085125 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LNREIG 8 LNRE+G Sbjct: 332 LNRELG 337>NP_001008781 Length = 4557 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ILNREI 7 ILNREI Sbjct: 116 ILNREI 121>NP_001363 Length = 4486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NILNREI 7 NIL REI Sbjct: 4263 NILTREI 4269>NP_004653 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NILNREI 7 NIL REI Sbjct: 575 NILTREI 581Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.155 0.446 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 450,491 Number of extensions: 720 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |