Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003290 20 509 NP_001017963 17 4312 NP_005339 17 4312 NP_001229743 16 5631 NP_001229742 16 5631 NP_055757 16 5631 NP_001229740 16 5631 NP_001229738 16 5631 XP_006715445 16 5631 XP_005248741 16 5631 XP_005248740 16 5631 XP_006715444 16 5631 XP_005248739 16 5631 XP_005248738 16 5631 XP_005248737 16 5631 XP_005248736 16 5631 NP_001258900 16 7355 NP_001258901 16 7355 NP_031381 16 7355 NP_001258899 16 7355 NP_001258898 16 7355 NP_003819 16 7355 NP_060101 16 7355 XP_006724919 16 7355 XP_006724918 16 7355 XP_005274825 16 7355 XP_005274824 16 7355 XP_005274823 16 7355 XP_006724917 16 7355 XP_005274822 16 7355 XP_005249132 16 7355 NP_597719 15 9605 NP_001036066 15 9605 NP_001274324 15 9605 NP_001275511 15 9605 XP_006724071 15 9605 XP_006715629 15 9605 XP_006713568 15 9605 XP_006713567 15 9605 XP_006712547 15 9605 NP_004943 15 9605 NP_078970 15 9605>NP_003290 Length = 803 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NIKLGVIEN 9 NIKLGVIE+ Sbjct: 491 NIKLGVIED 499>NP_001017963 Length = 854 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NIKLGVIEN 9 NIKLG+ E+ Sbjct: 566 NIKLGIHED 574>NP_005339 Length = 732 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NIKLGVIEN 9 NIKLG+ E+ Sbjct: 444 NIKLGIHED 452>NP_001229743 Length = 663 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIKLGVIEN 9 N KLG +EN Sbjct: 385 NTKLGQMEN 393>NP_001229742 Length = 692 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIKLGVIEN 9 N KLG +EN Sbjct: 409 NTKLGQMEN 417>NP_055757 Length = 722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIKLGVIEN 9 N KLG +EN Sbjct: 444 NTKLGQMEN 452>NP_001229740 Length = 727 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIKLGVIEN 9 N KLG +EN Sbjct: 444 NTKLGQMEN 452>NP_001229738 Length = 727 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIKLGVIEN 9 N KLG +EN Sbjct: 444 NTKLGQMEN 452>XP_006715445 Length = 696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIKLGVIEN 9 N KLG +EN Sbjct: 418 NTKLGQMEN 426>XP_005248741 Length = 592 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIKLGVIEN 9 N KLG +EN Sbjct: 309 NTKLGQMEN 317>XP_005248740 Length = 686 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIKLGVIEN 9 N KLG +EN Sbjct: 403 NTKLGQMEN 411>XP_006715444 Length = 721 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIKLGVIEN 9 N KLG +EN Sbjct: 443 NTKLGQMEN 451>XP_005248739 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIKLGVIEN 9 N KLG +EN Sbjct: 443 NTKLGQMEN 451>XP_005248738 Length = 727 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIKLGVIEN 9 N KLG +EN Sbjct: 444 NTKLGQMEN 452>XP_005248737 Length = 747 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIKLGVIEN 9 N KLG +EN Sbjct: 469 NTKLGQMEN 477>XP_005248736 Length = 752 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NIKLGVIEN 9 N KLG +EN Sbjct: 469 NTKLGQMEN 477>NP_001258900 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NIKLGVIEN 9 N+KLG+ E+ Sbjct: 388 NLKLGIHED 396>NP_001258901 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NIKLGVIEN 9 N+KLG+ E+ Sbjct: 426 NLKLGIHED 434>NP_031381 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NIKLGVIEN 9 N+KLG+ E+ Sbjct: 436 NLKLGIHED 444>NP_001258899 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NIKLGVIEN 9 N+KLG+ E+ Sbjct: 436 NLKLGIHED 444>NP_001258898 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NIKLGVIEN 9 N+KLG+ E+ Sbjct: 436 NLKLGIHED 444>NP_003819 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLGVIEN 9 KLG+ EN Sbjct: 193 KLGIFEN 199>NP_060101 Length = 1712 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLGVIEN 9 KLG +EN Sbjct: 1135 KLGAVEN 1141>XP_006724919 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLGVIEN 9 KLG+ EN Sbjct: 99 KLGIFEN 105>XP_006724918 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLGVIEN 9 KLG+ EN Sbjct: 193 KLGIFEN 199>XP_005274825 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLGVIEN 9 KLG+ EN Sbjct: 201 KLGIFEN 207>XP_005274824 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLGVIEN 9 KLG+ EN Sbjct: 210 KLGIFEN 216>XP_005274823 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLGVIEN 9 KLG+ EN Sbjct: 210 KLGIFEN 216>XP_006724917 Length = 690 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLGVIEN 9 KLG+ EN Sbjct: 218 KLGIFEN 224>XP_005274822 Length = 699 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLGVIEN 9 KLG+ EN Sbjct: 227 KLGIFEN 233>XP_005249132 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NIKLGVIEN 9 N+KLG+ E+ Sbjct: 436 NLKLGIHED 444>NP_597719 Length = 770 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKLGVIEN 9 IKLGVI + Sbjct: 219 IKLGVISS 226>NP_001036066 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKLGVIEN 9 IKLGVI + Sbjct: 219 IKLGVISS 226>NP_001274324 Length = 1688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IKLGVIEN 9 +KLGVI++ Sbjct: 275 VKLGVIKS 282>NP_001275511 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKLGVIEN 9 IKLGVI + Sbjct: 219 IKLGVISS 226>XP_006724071 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKLGVIE 8 IK+GV+E Sbjct: 691 IKVGVVE 697>XP_006715629 Length = 1667 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKLGVIEN 9 IKL V+EN Sbjct: 1146 IKLQVLEN 1153>XP_006713568 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKLGVIEN 9 IKLGVI + Sbjct: 219 IKLGVISS 226>XP_006713567 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKLGVIEN 9 IKLGVI + Sbjct: 219 IKLGVISS 226>XP_006712547 Length = 1674 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IKLGVIEN 9 +KLGVI++ Sbjct: 275 VKLGVIKS 282>NP_004943 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NIKLGVIEN 9 N+K+ V+E+ Sbjct: 189 NVKINVLED 197>NP_078970 Length = 1667 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKLGVIEN 9 IKL V+EN Sbjct: 1146 IKLQVLEN 1153Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.143 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 444,845 Number of extensions: 704 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |