Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 19 869 XP_006717990 19 869 XP_006717989 19 869 NP_057196 17 2528 NP_001240766 17 2528 NP_065979 17 4312 NP_001243208 17 4312 NP_062537 17 4312 NP_065934 17 4312 XP_006719809 17 4312 XP_005266240 17 4312 XP_005266239 17 4312 XP_006719808 17 4312 XP_006719807 17 4312 NP_612567 16 5631 NP_003257 16 5631 NP_612564 16 5631 NP_057349 16 5631 NP_008887 16 5631 NP_060572 16 5631 NP_001257426 16 5631 NP_037523 16 5631 XP_006723880 16 5631 XP_005260504 16 5631 XP_006723879 16 5631 XP_006714661 16 5631 XP_006714660 16 5631 NP_006437 16 7355 NP_689821 16 7355 NP_079493 16 7355 NP_001230280 16 7355 NP_057202 16 7355 NP_001129666 16 7355 NP_001129665 16 7355 NP_001186253 16 7355 NP_067645 16 7355 NP_940882 16 7355 XP_005250069 16 7355 XP_005250068 16 7355 XP_005250067 16 7355 XP_005267207 16 7355 XP_005273137 16 7355 NP_055744 16 7355 NP_057347 15 9605 NP_001009562 15 9605 XP_005259630 15 9605 NP_001129670 15 9605 NP_001129669 15 9605>NP_000305 Length = 403 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIIAMGFHA 9 NIIAMGF A Sbjct: 31 NIIAMGFPA 39>XP_006717990 Length = 175 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIIAMGFHA 9 NIIAMGF A Sbjct: 31 NIIAMGFPA 39>XP_006717989 Length = 388 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NIIAMGFHA 9 NIIAMGF A Sbjct: 31 NIIAMGFPA 39>NP_057196 Length = 805 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 +I+A+GFH Sbjct: 397 SIVAVGFH 404>NP_001240766 Length = 758 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 +I+A+GFH Sbjct: 350 SIVAVGFH 357>NP_065979 Length = 1215 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NIIAMGFH 8 N++ +GFH Sbjct: 221 NVLQVGFH 228>NP_001243208 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 N+I++G+H Sbjct: 82 NLISVGYH 89>NP_062537 Length = 533 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 N+I++G+H Sbjct: 49 NLISVGYH 56>NP_065934 Length = 1185 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NIIAMGFH 8 N++ +GFH Sbjct: 194 NVLQVGFH 201>XP_006719809 Length = 513 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 N+I++G+H Sbjct: 29 NLISVGYH 36>XP_005266240 Length = 513 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 N+I++G+H Sbjct: 29 NLISVGYH 36>XP_005266239 Length = 513 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 N+I++G+H Sbjct: 29 NLISVGYH 36>XP_006719808 Length = 513 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 N+I++G+H Sbjct: 29 NLISVGYH 36>XP_006719807 Length = 513 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 N+I++G+H Sbjct: 29 NLISVGYH 36>NP_612567 Length = 639 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NIIAMGFH 8 NII GFH Sbjct: 521 NIIHEGFH 528>NP_003257 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NIIAMGFH 8 NII GFH Sbjct: 681 NIIHEGFH 688>NP_612564 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NIIAMGFH 8 NII GFH Sbjct: 721 NIIHEGFH 728>NP_057349 Length = 697 Score = 16.2 bits (30), Expect = 5631 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 N++++G+H Sbjct: 43 NLVSVGYH 50>NP_008887 Length = 659 Score = 16.2 bits (30), Expect = 5631 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 N++++G+H Sbjct: 43 NLVSVGYH 50>NP_060572 Length = 680 Score = 16.2 bits (30), Expect = 5631 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 N++++G+H Sbjct: 45 NLVSVGYH 52>NP_001257426 Length = 679 Score = 16.2 bits (30), Expect = 5631 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 N++++G+H Sbjct: 44 NLVSVGYH 51>NP_037523 Length = 866 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AMGFHA 9 +MGFHA Sbjct: 483 SMGFHA 488>XP_006723880 Length = 680 Score = 16.2 bits (30), Expect = 5631 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 N++++G+H Sbjct: 45 NLVSVGYH 52>XP_005260504 Length = 680 Score = 16.2 bits (30), Expect = 5631 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 N++++G+H Sbjct: 45 NLVSVGYH 52>XP_006723879 Length = 703 Score = 16.2 bits (30), Expect = 5631 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 NIIAMGFH 8 N++++G+H Sbjct: 68 NLVSVGYH 75>XP_006714661 Length = 486 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AMGFHA 9 +MGFHA Sbjct: 103 SMGFHA 108>XP_006714660 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AMGFHA 9 +MGFHA Sbjct: 483 SMGFHA 488>NP_006437 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IAMGFHA 9 +A+GFH+ Sbjct: 570 LALGFHS 576>NP_689821 Length = 451 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 MGFHA 9 MGFHA Sbjct: 244 MGFHA 248>NP_079493 Length = 246 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 IIAMGFH 8 ++AM FH Sbjct: 177 VVAMSFH 183>NP_001230280 Length = 639 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IIAMGFH 8 ++AMG+H Sbjct: 258 MLAMGYH 264>NP_057202 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IIAMGFH 8 ++AMG+H Sbjct: 258 MLAMGYH 264>NP_001129666 Length = 710 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AMGFH 8 AMGFH Sbjct: 664 AMGFH 668>NP_001129665 Length = 710 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AMGFH 8 AMGFH Sbjct: 664 AMGFH 668>NP_001186253 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NIIAMGFHA 9 N++A+G+ A Sbjct: 43 NLVAVGYQA 51>NP_067645 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NIIAMGFHA 9 N++A+G+ A Sbjct: 43 NLVAVGYQA 51>NP_940882 Length = 731 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NIIAMGFHA 9 N++A+G+ A Sbjct: 43 NLVAVGYQA 51>XP_005250069 Length = 590 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IIAMGFH 8 ++AMG+H Sbjct: 258 MLAMGYH 264>XP_005250068 Length = 615 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IIAMGFH 8 ++AMG+H Sbjct: 234 MLAMGYH 240>XP_005250067 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IIAMGFH 8 ++AMG+H Sbjct: 257 MLAMGYH 263>XP_005267207 Length = 246 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 IIAMGFH 8 ++AM FH Sbjct: 177 VVAMSFH 183>XP_005273137 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 MGFHA 9 MGFHA Sbjct: 259 MGFHA 263>NP_055744 Length = 710 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AMGFH 8 AMGFH Sbjct: 664 AMGFH 668>NP_057347 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NIIAMGFH 8 N++A+G H Sbjct: 242 NLVAVGTH 249>NP_001009562 Length = 640 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IAMGFHA 9 +A+GFH+ Sbjct: 523 LAIGFHS 529>XP_005259630 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NIIAMGFH 8 N++A+G H Sbjct: 242 NLVAVGTH 249>NP_001129670 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NIIAMGFH 8 N++A+G H Sbjct: 242 NLVAVGTH 249>NP_001129669 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NIIAMGFH 8 N++A+G H Sbjct: 153 NLVAVGTH 160Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.145 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 492,199 Number of extensions: 714 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |