Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 20 509 NP_001120972 20 509 XP_006716052 20 509 XP_006716051 20 509 NP_002323 17 4312 NP_006293 16 5631 NP_001139630 16 5631 NP_115763 16 5631 NP_115597 16 5631 NP_079223 16 5631 XP_006723946 16 5631 XP_005260632 16 5631 XP_005260631 16 5631 XP_005260630 16 5631 XP_006722085 16 5631 XP_006722084 16 5631 XP_005257655 16 5631 XP_006722083 16 5631 XP_005257654 16 5631 XP_005257653 16 5631 XP_005257652 16 5631 XP_006713820 16 5631 XP_005247850 16 5631 XP_005247848 16 5631 XP_006713819 16 5631 XP_005247847 16 5631 XP_006713818 16 5631 XP_006713817 16 5631 XP_006713816 16 5631 XP_005247846 16 5631 NP_005543 16 7355 NP_001123579 16 7355 NP_891553 16 7355 NP_001248762 16 7355 NP_003763 16 7355 NP_001153699 15 9605 NP_079413 15 9605 NP_056369 15 9605 XP_006720764 15 9605 XP_005254752 15 9605 XP_006720763 15 9605 XP_006720762 15 9605 XP_005254751 15 9605 XP_005254356 15 9605 XP_005254355 15 9605>NP_000236 Length = 1390 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NHTAAIQSE 9 NHTA IQSE Sbjct: 149 NHTADIQSE 157>NP_001120972 Length = 1408 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NHTAAIQSE 9 NHTA IQSE Sbjct: 149 NHTADIQSE 157>XP_006716052 Length = 1409 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NHTAAIQSE 9 NHTA IQSE Sbjct: 168 NHTADIQSE 176>XP_006716051 Length = 1427 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NHTAAIQSE 9 NHTA IQSE Sbjct: 168 NHTADIQSE 176>NP_002323 Length = 4544 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NHTAAIQS 8 NHT IQS Sbjct: 1218 NHTCQIQS 1225>NP_006293 Length = 837 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NHTAAIQ 7 NHT A+Q Sbjct: 657 NHTKAVQ 663>NP_001139630 Length = 731 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NHTAAIQ 7 NHT A+Q Sbjct: 551 NHTKAVQ 557>NP_115763 Length = 1243 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTA ++SE Sbjct: 980 HTAEVESE 987>NP_115597 Length = 2715 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HTAAIQSE 9 HT IQSE Sbjct: 988 HTITIQSE 995>NP_079223 Length = 995 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTAA+Q + Sbjct: 91 HTAALQQQ 98>XP_006723946 Length = 1414 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HTAAIQSE 9 HT IQSE Sbjct: 988 HTITIQSE 995>XP_005260632 Length = 2377 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HTAAIQSE 9 HT IQSE Sbjct: 988 HTITIQSE 995>XP_005260631 Length = 2667 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HTAAIQSE 9 HT IQSE Sbjct: 940 HTITIQSE 947>XP_005260630 Length = 2693 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HTAAIQSE 9 HT IQSE Sbjct: 966 HTITIQSE 973>XP_006722085 Length = 907 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTA ++SE Sbjct: 644 HTAEVESE 651>XP_006722084 Length = 943 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTA ++SE Sbjct: 644 HTAEVESE 651>XP_005257655 Length = 971 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTA ++SE Sbjct: 672 HTAEVESE 679>XP_006722083 Length = 1233 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTA ++SE Sbjct: 934 HTAEVESE 941>XP_005257654 Length = 1237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTA ++SE Sbjct: 980 HTAEVESE 987>XP_005257653 Length = 1242 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTA ++SE Sbjct: 979 HTAEVESE 986>XP_005257652 Length = 1279 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTA ++SE Sbjct: 980 HTAEVESE 987>XP_006713820 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTAA+Q + Sbjct: 91 HTAALQQQ 98>XP_005247850 Length = 614 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTAA+Q + Sbjct: 91 HTAALQQQ 98>XP_005247848 Length = 897 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTAA+Q + Sbjct: 91 HTAALQQQ 98>XP_006713819 Length = 925 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTAA+Q + Sbjct: 91 HTAALQQQ 98>XP_005247847 Length = 983 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTAA+Q + Sbjct: 79 HTAALQQQ 86>XP_006713818 Length = 999 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTAA+Q + Sbjct: 79 HTAALQQQ 86>XP_006713817 Length = 999 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTAA+Q + Sbjct: 79 HTAALQQQ 86>XP_006713816 Length = 999 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTAA+Q + Sbjct: 79 HTAALQQQ 86>XP_005247846 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTAAIQSE 9 HTAA+Q + Sbjct: 91 HTAALQQQ 98>NP_005543 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NHTAAIQSE 9 NH A++SE Sbjct: 94 NHLNAVESE 102>NP_001123579 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NHTAAIQSE 9 NH A++SE Sbjct: 94 NHLNAVESE 102>NP_891553 Length = 573 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NHTAAIQSE 9 NH A++SE Sbjct: 94 NHLNAVESE 102>NP_001248762 Length = 524 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NHTAAIQ 7 NH AA+Q Sbjct: 477 NHAAALQ 483>NP_003763 Length = 524 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NHTAAIQ 7 NH AA+Q Sbjct: 477 NHAAALQ 483>NP_001153699 Length = 2330 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NHTAAIQS 8 NH+ ++QS Sbjct: 376 NHSTSVQS 383>NP_079413 Length = 2443 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NHTAAIQS 8 NH+ ++QS Sbjct: 376 NHSTSVQS 383>NP_056369 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NHTAAIQSE 9 NH A QSE Sbjct: 66 NHVAKQQSE 74>XP_006720764 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NHTAAIQS 8 NH+ ++QS Sbjct: 376 NHSTSVQS 383>XP_005254752 Length = 2357 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NHTAAIQS 8 NH+ ++QS Sbjct: 290 NHSTSVQS 297>XP_006720763 Length = 2395 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NHTAAIQS 8 NH+ ++QS Sbjct: 376 NHSTSVQS 383>XP_006720762 Length = 2397 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NHTAAIQS 8 NH+ ++QS Sbjct: 376 NHSTSVQS 383>XP_005254751 Length = 2407 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NHTAAIQS 8 NH+ ++QS Sbjct: 376 NHSTSVQS 383>XP_005254356 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NHTAAIQSE 9 NH A QSE Sbjct: 66 NHVAKQQSE 74>XP_005254355 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NHTAAIQSE 9 NH A QSE Sbjct: 66 NHVAKQQSE 74Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.104 0.261 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 439,170 Number of extensions: 1021 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |