Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 21 229 NP_001001419 17 2528 NP_005894 17 2528 NP_001001420 17 2528 NP_001243888 17 3301 NP_001277 17 3301 NP_001756 17 3301 XP_005245636 17 3301 NP_003319 17 4312 NP_803238 17 4312 NP_789787 16 5631 NP_001094891 16 5631 NP_001185787 16 7355 NP_001238903 16 7355 NP_694539 16 7355 NP_055696 16 7355 NP_001180404 16 7355 NP_001258745 16 7355 NP_001238902 16 7355 NP_001129101 16 7355 XP_005275603 16 7355 XP_005272864 16 7355 XP_005274912 16 7355 XP_006718153 16 7355 XP_005249108 16 7355 XP_006715011 16 7355 NP_000227 15 9605 NP_694996 15 9605 NP_056132 15 9605 NP_001269719 15 9605 NP_055491 15 9605 NP_001265227 15 9605 NP_001018494 15 9605 XP_006720565 15 9605 XP_005254431 15 9605 XP_006720564 15 9605 XP_005254429 15 9605 XP_005262667 15 9605 XP_005262666 15 9605 XP_006712037 15 9605 XP_006712036 15 9605 XP_006712035 15 9605 XP_005262664 15 9605>NP_002430 Length = 1137 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NHAFQAVTE 9 +HAFQAVTE Sbjct: 466 SHAFQAVTE 474>NP_001001419 Length = 465 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NHAFQAVTE 9 NH F+AV E Sbjct: 397 NHGFEAVYE 405>NP_005894 Length = 465 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NHAFQAVTE 9 NH F+AV E Sbjct: 397 NHGFEAVYE 405>NP_001001420 Length = 465 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NHAFQAVTE 9 NH F+AV E Sbjct: 397 NHGFEAVYE 405>NP_001243888 Length = 847 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NHAFQAVTE 9 +HAF VTE Sbjct: 608 HHAFPVVTE 616>NP_001277 Length = 869 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NHAFQAVTE 9 +HAF VTE Sbjct: 630 HHAFPVVTE 638>NP_001756 Length = 333 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NHAFQAVTE 9 NH ++ VTE Sbjct: 167 NHQYEGVTE 175>XP_005245636 Length = 346 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NHAFQAVTE 9 NH ++ VTE Sbjct: 167 NHQYEGVTE 175>NP_003319 Length = 527 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HAFQAVTE 9 HAFQ++ E Sbjct: 219 HAFQSIPE 226>NP_803238 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NHAFQAVTE 9 N+AFQA+ E Sbjct: 92 NNAFQALRE 100>NP_789787 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NHAFQAV 7 NH++QA+ Sbjct: 89 NHSYQAI 95>NP_001094891 Length = 1022 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HAFQAVTE 9 H F+AVT+ Sbjct: 958 HVFEAVTK 965>NP_001185787 Length = 227 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FQAVTE 9 FQAVTE Sbjct: 75 FQAVTE 80>NP_001238903 Length = 243 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AFQAVTE 9 AFQA+T+ Sbjct: 45 AFQAITD 51>NP_694539 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HAFQAVTE 9 H F+++TE Sbjct: 320 HLFESITE 327>NP_055696 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NHAFQAVT 8 N AF+AVT Sbjct: 860 NTAFEAVT 867>NP_001180404 Length = 738 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HAFQAVTE 9 H F+++TE Sbjct: 320 HLFESITE 327>NP_001258745 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NHAFQAVT 8 N AF+AVT Sbjct: 860 NTAFEAVT 867>NP_001238902 Length = 243 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AFQAVTE 9 AFQA+T+ Sbjct: 45 AFQAITD 51>NP_001129101 Length = 780 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HAFQAVTE 9 H F+++TE Sbjct: 320 HLFESITE 327>XP_005275603 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FQAVTE 9 FQAVTE Sbjct: 75 FQAVTE 80>XP_005272864 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FQAVTE 9 FQAVTE Sbjct: 75 FQAVTE 80>XP_005274912 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FQAVTE 9 FQAVTE Sbjct: 75 FQAVTE 80>XP_006718153 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NHAFQAVT 8 N AF+AVT Sbjct: 860 NTAFEAVT 867>XP_005249108 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FQAVTE 9 FQAVTE Sbjct: 75 FQAVTE 80>XP_006715011 Length = 243 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AFQAVTE 9 AFQA+T+ Sbjct: 45 AFQAITD 51>NP_000227 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HAFQAVTE 9 H F A+T+ Sbjct: 266 HGFNAITQ 273>NP_694996 Length = 2526 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NHAFQAVTE 9 N FQ VTE Sbjct: 2189 NDGFQFVTE 2197>NP_056132 Length = 1064 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NHAFQAV 7 NH FQA+ Sbjct: 2 NHDFQAL 8>NP_001269719 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NHAFQAV 7 NH FQA+ Sbjct: 2 NHDFQAL 8>NP_055491 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NHAFQAV 7 NH FQA+ Sbjct: 129 NHDFQAL 135>NP_001265227 Length = 2614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NHAFQAVTE 9 N FQ VTE Sbjct: 2189 NDGFQFVTE 2197>NP_001018494 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NHAFQAV 7 NH FQA+ Sbjct: 129 NHDFQAL 135>XP_006720565 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HAFQAVTE 9 H F A+T+ Sbjct: 219 HGFNAITQ 226>XP_005254431 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HAFQAVTE 9 H F A+T+ Sbjct: 245 HGFNAITQ 252>XP_006720564 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HAFQAVTE 9 H F A+T+ Sbjct: 266 HGFNAITQ 273>XP_005254429 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 HAFQAVTE 9 H F A+T+ Sbjct: 266 HGFNAITQ 273>XP_005262667 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NHAFQAV 7 NH FQA+ Sbjct: 2 NHDFQAL 8>XP_005262666 Length = 987 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NHAFQAV 7 NH FQA+ Sbjct: 2 NHDFQAL 8>XP_006712037 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NHAFQAV 7 NH FQA+ Sbjct: 2 NHDFQAL 8>XP_006712036 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NHAFQAV 7 NH FQA+ Sbjct: 2 NHDFQAL 8>XP_006712035 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NHAFQAV 7 NH FQA+ Sbjct: 2 NHDFQAL 8>XP_005262664 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NHAFQAV 7 NH FQA+ Sbjct: 2 NHDFQAL 8Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.118 0.333 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 343,300 Number of extensions: 436 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |