Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 20 390 XP_005267290 20 390 NP_055544 17 3301 NP_036257 16 5631 NP_078858 16 5631 NP_001278232 16 5631 NP_001278214 16 5631 NP_689964 16 5631 NP_443109 16 5631 NP_722576 16 5631 NP_963836 16 5631 XP_005262424 16 5631 XP_005254198 16 5631 XP_005252459 16 5631 XP_006717485 16 5631 XP_006717472 16 5631 XP_006717471 16 5631 NP_001139669 16 5631 NP_003473 16 7355 XP_006719679 16 7355 XP_005269219 16 7355 XP_006719678 16 7355 XP_006719677 16 7355 NP_733468 15 9605 NP_003757 15 9605 NP_653091 15 9605 NP_001139283 15 9605 NP_849180 15 9605 NP_005522 15 9605 NP_006600 15 9605 NP_001193496 15 9605 NP_201583 15 9605 NP_001274111 15 9605 NP_001025174 15 9605 NP_059978 15 9605 NP_001139291 15 9605 NP_001072983 15 9605 NP_006198 15 9605 NP_001274731 15 9605 NP_003184 15 9605 NP_001274730 15 9605 XP_005260507 15 9605 XP_006723885 15 9605 XP_005257817 15 9605 XP_005257816 15 9605 XP_005257815 15 9605 XP_006711353 15 9605 XP_005245184 15 9605 NP_955459 15 9605>NP_005091 Length = 1782 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NGQLSTIN 8 NGQLSTIN Sbjct: 59 NGQLSTIN 66>XP_005267290 Length = 1782 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NGQLSTIN 8 NGQLSTIN Sbjct: 59 NGQLSTIN 66>NP_055544 Length = 526 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 NGQLSTIN 8 +GQL+TIN Sbjct: 176 HGQLTTIN 183>NP_036257 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NGQLSTINS 9 N QL T+N+ Sbjct: 58 NSQLKTVNN 66>NP_078858 Length = 4981 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NGQLSTINS 9 +G+LSTI+S Sbjct: 638 SGRLSTISS 646>NP_001278232 Length = 4983 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NGQLSTINS 9 +G+LSTI+S Sbjct: 638 SGRLSTISS 646>NP_001278214 Length = 4982 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 NGQLSTINS 9 +G+LSTI+S Sbjct: 638 SGRLSTISS 646>NP_689964 Length = 468 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NGQLSTINS 9 NG+L +NS Sbjct: 97 NGELPVVNS 105>NP_443109 Length = 301 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NGQLSTIN 8 +GQL+T+N Sbjct: 53 SGQLNTLN 60>NP_722576 Length = 3080 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NGQLSTINS 9 N LST+NS Sbjct: 1723 NRSLSTVNS 1731>NP_963836 Length = 268 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NGQLSTIN 8 +GQL+T+N Sbjct: 53 SGQLNTLN 60>XP_005262424 Length = 2875 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NGQLSTINS 9 N LST+NS Sbjct: 1518 NRSLSTVNS 1526>XP_005254198 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NGQLSTINS 9 N QL T+N+ Sbjct: 58 NSQLKTVNN 66>XP_005252459 Length = 520 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NGQLSTINS 9 NG+L +NS Sbjct: 149 NGELPVVNS 157>XP_006717485 Length = 383 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NGQLSTINS 9 NG+L +NS Sbjct: 97 NGELPVVNS 105>XP_006717472 Length = 434 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NGQLSTINS 9 NG+L +NS Sbjct: 149 NGELPVVNS 157>XP_006717471 Length = 435 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NGQLSTINS 9 NG+L +NS Sbjct: 149 NGELPVVNS 157>NP_001139669 Length = 7081 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NGQLSTINS 9 NG + T+NS Sbjct: 1888 NGTICTVNS 1896>NP_003473 Length = 5537 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GQLSTIN 8 GQLSTI+ Sbjct: 2013 GQLSTIS 2019>XP_006719679 Length = 5536 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GQLSTIN 8 GQLSTI+ Sbjct: 2012 GQLSTIS 2018>XP_005269219 Length = 5537 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GQLSTIN 8 GQLSTI+ Sbjct: 2013 GQLSTIS 2019>XP_006719678 Length = 5539 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GQLSTIN 8 GQLSTI+ Sbjct: 2015 GQLSTIS 2021>XP_006719677 Length = 5540 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GQLSTIN 8 GQLSTI+ Sbjct: 2016 GQLSTIS 2022>NP_733468 Length = 2342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GQLSTIN 8 GQL+T+N Sbjct: 818 GQLTTMN 824>NP_003757 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NGQLSTINS 9 +GQ TIN+ Sbjct: 279 SGQFGTINN 287>NP_653091 Length = 2316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GQLSTIN 8 GQL+T+N Sbjct: 792 GQLTTMN 798>NP_001139283 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NGQLSTINS 9 +G+LS+IN+ Sbjct: 496 DGKLSSINN 504>NP_849180 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NGQLST 6 NGQ+ST Sbjct: 414 NGQMST 419>NP_005522 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NGQLSTIN 8 +G+L+TIN Sbjct: 663 HGRLTTIN 670>NP_006600 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NGQLSTINS 9 NG ++INS Sbjct: 180 NGSFTSINS 188>NP_001193496 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NGQLSTIN 8 +G+L+TIN Sbjct: 663 HGRLTTIN 670>NP_201583 Length = 808 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NGQLSTINS 9 +G+LS+IN+ Sbjct: 523 DGKLSSINN 531>NP_001274111 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NGQLST 6 NGQ+ST Sbjct: 389 NGQMST 394>NP_001025174 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NGQLST 6 NGQ+ST Sbjct: 392 NGQMST 397>NP_059978 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NGQLSTINS 9 +G+LS+IN+ Sbjct: 499 DGKLSSINN 507>NP_001139291 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NGQLSTINS 9 +G+LS+IN+ Sbjct: 536 DGKLSSINN 544>NP_001072983 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GQLSTIN 8 GQL T+N Sbjct: 363 GQLKTLN 369>NP_006198 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GQLSTINS 9 GQL+ +NS Sbjct: 126 GQLTLVNS 133>NP_001274731 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GQLSTIN 8 GQL T+N Sbjct: 250 GQLKTLN 256>NP_003184 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GQLSTIN 8 GQL T+N Sbjct: 363 GQLKTLN 369>NP_001274730 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GQLSTIN 8 GQL T+N Sbjct: 414 GQLKTLN 420>XP_005260507 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NGQLSTINS 9 +GQLST+ S Sbjct: 404 SGQLSTLVS 412>XP_006723885 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NGQLSTINS 9 +GQLST+ S Sbjct: 426 SGQLSTLVS 434>XP_005257817 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NGQLSTINS 9 +GQ TIN+ Sbjct: 279 SGQFGTINN 287>XP_005257816 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NGQLSTINS 9 +GQ TIN+ Sbjct: 279 SGQFGTINN 287>XP_005257815 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NGQLSTINS 9 +GQ TIN+ Sbjct: 279 SGQFGTINN 287>XP_006711353 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NGQLSTIN 8 +G+L+TIN Sbjct: 611 HGRLTTIN 618>XP_005245184 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NGQLSTIN 8 +G+L+TIN Sbjct: 723 HGRLTTIN 730>NP_955459 Length = 645 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NGQLSTINS 9 +GQLST+ S Sbjct: 623 SGQLSTLVS 631Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.114 0.283 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 416,708 Number of extensions: 639 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |