Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_061987 17 2528 XP_006717209 17 2528 XP_006717208 17 2528 XP_006717207 17 2528 NP_060516 17 4312 NP_060393 17 4312 NP_839955 16 5631 NP_653184 16 5631 NP_001034451 16 5631 NP_001020095 16 5631 XP_005265807 16 5631 XP_006714105 16 5631 XP_005265805 16 5631 XP_005265804 16 5631 NP_060731 16 5631 NP_852478 16 7355 NP_001949 16 7355 NP_004789 16 7355 NP_004791 16 7355 NP_005774 16 7355 NP_001243556 15 9605 NP_003948 15 9605 NP_001243559 15 9605 NP_001243558 15 9605 NP_003595 15 9605 NP_001269147 15 9605 NP_001093143 15 9605 NP_001093142 15 9605 NP_001093141 15 9605 NP_001093140 15 9605 XP_005262277 15 9605 XP_006724776 15 9605 XP_005253277 15 9605 XP_006718442 15 9605 XP_006718441 15 9605 XP_006718440 15 9605 XP_006718439 15 9605 XP_005253275 15 9605 XP_006718438 15 9605 XP_006718437 15 9605 NP_060499 15 9605>NP_061987 Length = 900 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FVNVEKKS 9 FVN+ KKS Sbjct: 634 FVNINKKS 641>XP_006717209 Length = 812 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FVNVEKKS 9 FVN+ KKS Sbjct: 634 FVNINKKS 641>XP_006717208 Length = 838 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FVNVEKKS 9 FVN+ KKS Sbjct: 634 FVNINKKS 641>XP_006717207 Length = 861 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FVNVEKKS 9 FVN+ KKS Sbjct: 634 FVNINKKS 641>NP_060516 Length = 714 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NFVNVEKKS 9 NF N++KK+ Sbjct: 312 NFANMKKKA 320>NP_060393 Length = 272 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NFVNVEKKS 9 NF+N+ KKS Sbjct: 9 NFLNMWKKS 17>NP_839955 Length = 879 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FVNVEK 7 FVNVEK Sbjct: 695 FVNVEK 700>NP_653184 Length = 381 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFVNVEKKS 9 N N+EKKS Sbjct: 148 NLENLEKKS 156>NP_001034451 Length = 427 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFVNVEKKS 9 N N+EKKS Sbjct: 148 NLENLEKKS 156>NP_001020095 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FVNVEK 7 FVNVEK Sbjct: 710 FVNVEK 715>XP_005265807 Length = 879 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FVNVEK 7 FVNVEK Sbjct: 695 FVNVEK 700>XP_006714105 Length = 897 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FVNVEK 7 FVNVEK Sbjct: 713 FVNVEK 718>XP_005265805 Length = 912 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FVNVEK 7 FVNVEK Sbjct: 728 FVNVEK 733>XP_005265804 Length = 912 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FVNVEK 7 FVNVEK Sbjct: 728 FVNVEK 733>NP_060731 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FVNVEK 7 FVNVEK Sbjct: 710 FVNVEK 715>NP_852478 Length = 1179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NFVNVEKKS 9 N VN++KK+ Sbjct: 679 NKVNIQKKN 687>NP_001949 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVEKKS 9 NVEKKS Sbjct: 440 NVEKKS 445>NP_004789 Length = 747 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NFVNVEKKS 9 NF+ +E+KS Sbjct: 589 NFIPLEEKS 597>NP_004791 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFVNVEKKS 9 NF + EKKS Sbjct: 45 NFCDEEKKS 53>NP_005774 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NFVNVEKKS 9 NF +EKK+ Sbjct: 205 NFTKLEKKT 213>NP_001243556 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NFVNVEKK 8 NF+++EK+ Sbjct: 524 NFISLEKE 531>NP_003948 Length = 668 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NFVNVEKK 8 NF+++EK+ Sbjct: 524 NFISLEKE 531>NP_001243559 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NFVNVEKK 8 NF+++EK+ Sbjct: 570 NFISLEKE 577>NP_001243558 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NFVNVEKK 8 NF+++EK+ Sbjct: 524 NFISLEKE 531>NP_003595 Length = 1257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NFVNVE 6 N+VNVE Sbjct: 958 NYVNVE 963>NP_001269147 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NFVNVEKK 8 NF+++EK+ Sbjct: 464 NFISLEKE 471>NP_001093143 Length = 100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FVNVEKK 8 FVNV+K+ Sbjct: 54 FVNVQKE 60>NP_001093142 Length = 100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FVNVEKK 8 FVNV+K+ Sbjct: 54 FVNVQKE 60>NP_001093141 Length = 100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FVNVEKK 8 FVNV+K+ Sbjct: 54 FVNVQKE 60>NP_001093140 Length = 100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FVNVEKK 8 FVNV+K+ Sbjct: 54 FVNVQKE 60>XP_005262277 Length = 1256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NFVNVE 6 N+VNVE Sbjct: 958 NYVNVE 963>XP_006724776 Length = 1256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NFVNVE 6 N+VNVE Sbjct: 958 NYVNVE 963>XP_005253277 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NFVNVEKK 8 NF+++EK+ Sbjct: 241 NFISLEKE 248>XP_006718442 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NFVNVEKK 8 NF+++EK+ Sbjct: 463 NFISLEKE 470>XP_006718441 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NFVNVEKK 8 NF+++EK+ Sbjct: 546 NFISLEKE 553>XP_006718440 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NFVNVEKK 8 NF+++EK+ Sbjct: 486 NFISLEKE 493>XP_006718439 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NFVNVEKK 8 NF+++EK+ Sbjct: 486 NFISLEKE 493>XP_005253275 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NFVNVEKK 8 NF+++EK+ Sbjct: 524 NFISLEKE 531>XP_006718438 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NFVNVEKK 8 NF+++EK+ Sbjct: 546 NFISLEKE 553>XP_006718437 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NFVNVEKK 8 NF+++EK+ Sbjct: 546 NFISLEKE 553>NP_060499 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NFVNVEKKS 9 NF+ +EK S Sbjct: 173 NFIALEKSS 181Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.121 0.303 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 530,457 Number of extensions: 631 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |