Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 22 134 XP_005262424 22 134 NP_000327 17 2528 NP_006802 17 2528 NP_945179 17 2528 XP_005255524 17 2528 NP_008931 17 4312 NP_001268372 17 4312 NP_068576 16 5631 NP_001137438 16 5631 NP_001137437 16 5631 NP_001137436 16 5631 NP_057579 16 5631 NP_001094387 16 5631 NP_001245386 16 5631 NP_065961 16 5631 NP_001158137 16 5631 XP_005268726 16 5631 XP_006719313 16 5631 XP_006716134 16 5631 XP_005249223 16 5631 XP_005249224 16 5631 XP_005249221 16 5631 XP_006715168 16 5631 XP_005249220 16 5631 NP_001080 16 7355 NP_619542 16 7355 NP_660153 16 7355 NP_612154 16 7355 NP_060876 16 7355 NP_596870 16 7355 NP_004523 16 7355 NP_001265166 16 7355 NP_071337 16 7355 NP_055069 16 7355 XP_005274600 16 7355 XP_006719258 16 7355 XP_005268620 16 7355 XP_005268619 16 7355 XP_006717677 16 7355 XP_006717676 16 7355 XP_006717675 16 7355 XP_005269545 16 7355 XP_006717671 16 7355 XP_006717670 16 7355 XP_006717669 16 7355 XP_006717668 16 7355 XP_006717667 16 7355 NP_002178 15 9605 NP_004657 15 9605 NP_945349 15 9605 NP_067585 15 9605 NP_004318 15 9605 NP_001138585 15 9605 NP_776169 15 9605 NP_001095937 15 9605 NP_116307 15 9605 XP_006724996 15 9605 XP_005260602 15 9605 XP_006723938 15 9605 NP_001177655 15 9605 NP_001127694 15 9605 NP_150366 15 9605 NP_631948 15 9605>NP_722576 Length = 3080 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NFTSAFYEN 9 NFTSAF+EN Sbjct: 681 NFTSAFHEN 689>XP_005262424 Length = 2875 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NFTSAFYEN 9 NFTSAF+EN Sbjct: 476 NFTSAFHEN 484>NP_000327 Length = 640 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFTSAFY 7 NFTS FY Sbjct: 260 NFTSIFY 266>NP_006802 Length = 473 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NFTSAFY 7 +FTSAFY Sbjct: 208 SFTSAFY 214>NP_945179 Length = 473 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NFTSAFY 7 +FTSAFY Sbjct: 208 SFTSAFY 214>XP_005255524 Length = 685 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NFTSAFY 7 NFTS FY Sbjct: 305 NFTSIFY 311>NP_008931 Length = 258 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NFTSAF 6 NFTSAF Sbjct: 170 NFTSAF 175>NP_001268372 Length = 273 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NFTSAF 6 NFTSAF Sbjct: 170 NFTSAF 175>NP_068576 Length = 805 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NFTSAFYEN 9 N T F+EN Sbjct: 322 NMTQGFWEN 330>NP_001137438 Length = 266 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NFTSAFYE 8 NF S +YE Sbjct: 8 NFRSVYYE 15>NP_001137437 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NFTSAFYE 8 NF S +YE Sbjct: 8 NFRSVYYE 15>NP_001137436 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NFTSAFYE 8 NF S +YE Sbjct: 8 NFRSVYYE 15>NP_057579 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NFTSAFYE 8 NF S +YE Sbjct: 8 NFRSVYYE 15>NP_001094387 Length = 248 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFTSAFYEN 9 NF +AF EN Sbjct: 41 NFLTAFDEN 49>NP_001245386 Length = 247 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NFTSAFYE 8 NF S +YE Sbjct: 8 NFRSVYYE 15>NP_065961 Length = 1934 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFTSAFYE 8 +FTSAF E Sbjct: 743 HFTSAFIE 750>NP_001158137 Length = 1950 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFTSAFYE 8 +FTSAF E Sbjct: 743 HFTSAFIE 750>XP_005268726 Length = 248 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFTSAFYEN 9 NF +AF EN Sbjct: 41 NFLTAFDEN 49>XP_006719313 Length = 259 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFTSAFYEN 9 NF +AF EN Sbjct: 52 NFLTAFDEN 60>XP_006716134 Length = 1847 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NFTSAFYE 8 +FTSAF E Sbjct: 667 HFTSAFIE 674>XP_005249223 Length = 266 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NFTSAFYE 8 NF S +YE Sbjct: 8 NFRSVYYE 15>XP_005249224 Length = 266 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NFTSAFYE 8 NF S +YE Sbjct: 8 NFRSVYYE 15>XP_005249221 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NFTSAFYE 8 NF S +YE Sbjct: 8 NFRSVYYE 15>XP_006715168 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NFTSAFYE 8 NF S +YE Sbjct: 8 NFRSVYYE 15>XP_005249220 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 NFTSAFYE 8 NF S +YE Sbjct: 8 NFRSVYYE 15>NP_001080 Length = 1704 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SAFYEN 9 S+FYEN Sbjct: 1262 SSFYEN 1267>NP_619542 Length = 1041 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NFTSAFY 7 NF +AFY Sbjct: 955 NFKTAFY 961>NP_660153 Length = 1121 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFTSAFYEN 9 NFTS+F N Sbjct: 59 NFTSSFEFN 67>NP_612154 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 NFTSAFY 7 NFT FY Sbjct: 603 NFTPVFY 609>NP_060876 Length = 5412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 NFTSAFY 7 NFT FY Sbjct: 4890 NFTPVFY 4896>NP_596870 Length = 5604 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NFTSAFYE 8 N+T +F+E Sbjct: 5499 NYTDSFFE 5506>NP_004523 Length = 1176 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 NFTSAFY 7 NFT FY Sbjct: 654 NFTPVFY 660>NP_001265166 Length = 183 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 NFTSAFYEN 9 NF YEN Sbjct: 11 NFLGTIYEN 19>NP_071337 Length = 408 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NFTSAFY 7 +FT AFY Sbjct: 96 DFTGAFY 102>NP_055069 Length = 443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 NFTSAFYEN 9 NF YEN Sbjct: 271 NFLGTIYEN 279>XP_005274600 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NFTSAFY 7 NF +AFY Sbjct: 973 NFKTAFY 979>XP_006719258 Length = 183 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 NFTSAFYEN 9 NF YEN Sbjct: 11 NFLGTIYEN 19>XP_005268620 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 NFTSAFYEN 9 NF YEN Sbjct: 168 NFLGTIYEN 176>XP_005268619 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 NFTSAFYEN 9 NF YEN Sbjct: 168 NFLGTIYEN 176>XP_006717677 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFTSAFYEN 9 NFTS+F N Sbjct: 59 NFTSSFEFN 67>XP_006717676 Length = 793 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFTSAFYEN 9 NFTS+F N Sbjct: 59 NFTSSFEFN 67>XP_006717675 Length = 877 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFTSAFYEN 9 NFTS+F N Sbjct: 59 NFTSSFEFN 67>XP_005269545 Length = 1051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFTSAFYEN 9 NFTS+F N Sbjct: 59 NFTSSFEFN 67>XP_006717671 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFTSAFYEN 9 NFTS+F N Sbjct: 59 NFTSSFEFN 67>XP_006717670 Length = 1120 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFTSAFYEN 9 NFTS+F N Sbjct: 59 NFTSSFEFN 67>XP_006717669 Length = 1120 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFTSAFYEN 9 NFTS+F N Sbjct: 59 NFTSSFEFN 67>XP_006717668 Length = 1121 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFTSAFYEN 9 NFTS+F N Sbjct: 59 NFTSSFEFN 67>XP_006717667 Length = 1121 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NFTSAFYEN 9 NFTS+F N Sbjct: 59 NFTSSFEFN 67>NP_002178 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 NFTSAFY 7 N+TS+F+ Sbjct: 222 NYTSSFF 228>NP_004657 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FTSAFYEN 9 FT+A YE+ Sbjct: 25 FTAAVYEH 32>NP_945349 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FTSAFY 7 FTSAF+ Sbjct: 194 FTSAFF 199>NP_067585 Length = 1227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 FTSAFYEN 9 FT FY N Sbjct: 1096 FTDEFYPN 1103>NP_004318 Length = 1271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 FTSAFYEN 9 FT FY N Sbjct: 1140 FTDEFYPN 1147>NP_001138585 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NFTSAF 6 NFT+AF Sbjct: 86 NFTAAF 91>NP_776169 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NFTSAFY 7 +FTS FY Sbjct: 341 SFTSIFY 347>NP_001095937 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FTSAFY 7 FTSAF+ Sbjct: 206 FTSAFF 211>NP_116307 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 NFTSAFYE 8 N T FYE Sbjct: 155 NITEIFYE 162>XP_006724996 Length = 181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 FTSAFYEN 9 FT FY N Sbjct: 26 FTDEFYPN 33>XP_005260602 Length = 1061 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NFTSAF 6 NFTS+F Sbjct: 1026 NFTSSF 1031>XP_006723938 Length = 1061 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NFTSAF 6 NFTS+F Sbjct: 1026 NFTSSF 1031>NP_001177655 Length = 180 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 NFTSAFYE 8 N T FYE Sbjct: 136 NITEIFYE 143>NP_001127694 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FTSAFYEN 9 +TS FY N Sbjct: 384 YTSPFYGN 391>NP_150366 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FTSAFYEN 9 +TS FY N Sbjct: 384 YTSPFYGN 391>NP_631948 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TSAFYE 8 TSAFY+ Sbjct: 168 TSAFYD 173Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.126 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 509,975 Number of extensions: 1042 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |