Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055365 19 869 NP_115518 16 5631 XP_006722394 16 5631 XP_005258167 16 5631 XP_006722393 16 5631 XP_006722392 16 5631 XP_006722391 16 5631 XP_006722390 16 5631 XP_005258166 16 5631 XP_006722389 16 5631 XP_005258165 16 5631 XP_005258164 16 5631 NP_054722 16 7355 NP_079113 16 7355 XP_005256326 16 7355 XP_006720759 16 7355 XP_006720758 16 7355 XP_006720757 16 7355 XP_006720756 16 7355 NP_001182058 15 9605 NP_071349 15 9605 NP_001269539 15 9605 NP_001269535 15 9605 NP_057140 15 9605 NP_001269538 15 9605 NP_653292 15 9605 NP_001161707 15 9605 XP_006723846 15 9605 XP_005257625 15 9605 XP_005257624 15 9605 XP_006710602 15 9605 XP_006710601 15 9605 XP_006710598 15 9605 XP_006710597 15 9605 XP_006710596 15 9605 XP_006710595 15 9605 XP_006710594 15 9605 XP_006710593 15 9605 XP_006710592 15 9605 XP_006710591 15 9605 XP_006710590 15 9605 XP_006710589 15 9605 XP_006710588 15 9605 XP_006710587 15 9605 XP_006710586 15 9605 XP_006710585 15 9605 XP_005270755 15 9605 XP_006710584 15 9605 XP_005270754 15 9605 XP_005270753 15 9605 XP_006710583 15 9605 XP_005270752 15 9605 XP_006710582 15 9605 XP_005270751 15 9605 NP_001157903 15 9605>NP_055365 Length = 1032 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NELLTTLTS 9 +ELLTTLTS Sbjct: 431 DELLTTLTS 439>NP_115518 Length = 2537 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 ELLT LTS Sbjct: 2236 ELLTRLTS 2243>XP_006722394 Length = 1845 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 ELLT LTS Sbjct: 1543 ELLTRLTS 1550>XP_005258167 Length = 1856 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 ELLT LTS Sbjct: 1554 ELLTRLTS 1561>XP_006722393 Length = 2199 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 ELLT LTS Sbjct: 1897 ELLTRLTS 1904>XP_006722392 Length = 2444 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 ELLT LTS Sbjct: 2142 ELLTRLTS 2149>XP_006722391 Length = 2448 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 ELLT LTS Sbjct: 2146 ELLTRLTS 2153>XP_006722390 Length = 2467 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 ELLT LTS Sbjct: 2166 ELLTRLTS 2173>XP_005258166 Length = 2468 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 ELLT LTS Sbjct: 2166 ELLTRLTS 2173>XP_006722389 Length = 2506 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 ELLT LTS Sbjct: 2236 ELLTRLTS 2243>XP_005258165 Length = 2534 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 ELLT LTS Sbjct: 2232 ELLTRLTS 2239>XP_005258164 Length = 2538 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 ELLT LTS Sbjct: 2236 ELLTRLTS 2243>NP_054722 Length = 1227 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NELLTT 6 NELLTT Sbjct: 876 NELLTT 881>NP_079113 Length = 1192 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NELLTTLTS 9 NE+L +LTS Sbjct: 574 NEVLLSLTS 582>XP_005256326 Length = 1192 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 NELLTT 6 NELLTT Sbjct: 841 NELLTT 846>XP_006720759 Length = 629 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NELLTTLTS 9 NE+L +LTS Sbjct: 611 NEVLLSLTS 619>XP_006720758 Length = 754 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NELLTTLTS 9 NE+L +LTS Sbjct: 611 NEVLLSLTS 619>XP_006720757 Length = 1008 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NELLTTLTS 9 NE+L +LTS Sbjct: 390 NEVLLSLTS 398>XP_006720756 Length = 1229 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NELLTTLTS 9 NE+L +LTS Sbjct: 611 NEVLLSLTS 619>NP_001182058 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NELLTTLT 8 NELL T+T Sbjct: 152 NELLWTVT 159>NP_071349 Length = 1292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ELLTTLTS 9 E++TT+TS Sbjct: 547 EVVTTMTS 554>NP_001269539 Length = 207 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLTTLTS 9 LLTT+TS Sbjct: 16 LLTTVTS 22>NP_001269535 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLTTLTS 9 LLTT+TS Sbjct: 94 LLTTVTS 100>NP_057140 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLTTLTS 9 LLTT+TS Sbjct: 47 LLTTVTS 53>NP_001269538 Length = 162 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLTTLTS 9 LLTT+TS Sbjct: 47 LLTTVTS 53>NP_653292 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NELLTTLTS 9 N+L TLTS Sbjct: 658 NQLTQTLTS 666>NP_001161707 Length = 2139 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NELLTTLTS 9 +ELL T+TS Sbjct: 1103 DELLCTVTS 1111>XP_006723846 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ELLTTLT 8 ELL+TLT Sbjct: 141 ELLSTLT 147>XP_005257625 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ELLTTLTS 9 E++TT+TS Sbjct: 522 EVVTTMTS 529>XP_005257624 Length = 1293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ELLTTLTS 9 E++TT+TS Sbjct: 547 EVVTTMTS 554>XP_006710602 Length = 7391 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 1992 ELMETLTS 1999>XP_006710601 Length = 4720 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 2152 ELMETLTS 2159>XP_006710598 Length = 7553 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 1982 ELMETLTS 1989>XP_006710597 Length = 7451 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 1992 ELMETLTS 1999>XP_006710596 Length = 7512 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 1941 ELMETLTS 1948>XP_006710595 Length = 7526 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 1955 ELMETLTS 1962>XP_006710594 Length = 7528 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 1957 ELMETLTS 1964>XP_006710593 Length = 7539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 1968 ELMETLTS 1975>XP_006710592 Length = 7544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 1973 ELMETLTS 1980>XP_006710591 Length = 7558 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 1987 ELMETLTS 1994>XP_006710590 Length = 7563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 1992 ELMETLTS 1999>XP_006710589 Length = 7595 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 2024 ELMETLTS 2031>XP_006710588 Length = 7614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 2152 ELMETLTS 2159>XP_006710587 Length = 7645 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 2152 ELMETLTS 2159>XP_006710586 Length = 7645 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 2152 ELMETLTS 2159>XP_006710585 Length = 7657 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 2152 ELMETLTS 2159>XP_005270755 Length = 7663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 2152 ELMETLTS 2159>XP_006710584 Length = 7686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 2152 ELMETLTS 2159>XP_005270754 Length = 7694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 2152 ELMETLTS 2159>XP_005270753 Length = 7700 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 2152 ELMETLTS 2159>XP_006710583 Length = 7702 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 2152 ELMETLTS 2159>XP_005270752 Length = 7717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 2152 ELMETLTS 2159>XP_006710582 Length = 7720 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 2152 ELMETLTS 2159>XP_005270751 Length = 7723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELLTTLTS 9 EL+ TLTS Sbjct: 2152 ELMETLTS 2159>NP_001157903 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ELLTTLT 8 ELL+TLT Sbjct: 140 ELLSTLT 146Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.115 0.267 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 322,124 Number of extensions: 487 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |