Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001136098 20 390 NP_000360 20 390 NP_001018046 20 390 XP_005268096 20 390 XP_006720308 20 390 XP_005268094 20 390 NP_000224 19 665 NP_006176 17 4312 NP_001273490 17 4312 XP_006718633 17 4312 XP_006718632 17 4312 XP_006718631 17 4312 XP_006718630 17 4312 XP_006718629 17 4312 XP_006718628 17 4312 XP_006718627 17 4312 XP_006718626 17 4312 XP_006718625 17 4312 NP_444267 16 5631 XP_005265754 16 5631 NP_001193933 16 5631 NP_065170 16 7355 NP_001124335 15 9605 NP_006200 15 9605 NP_001035181 15 9605 NP_003130 15 9605 NP_073728 15 9605 XP_006716650 15 9605 XP_006716649 15 9605 XP_006716648 15 9605 XP_006716647 15 9605 XP_006712887 15 9605 XP_005246168 15 9605 NP_570603 15 9605 NP_055018 15 9605>NP_001136098 Length = 274 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NEALTLKLY 9 NE LTLKLY Sbjct: 177 NETLTLKLY 185>NP_000360 Length = 764 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NEALTLKLY 9 NE LTLKLY Sbjct: 177 NETLTLKLY 185>NP_001018046 Length = 253 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NEALTLKLY 9 NE LTLKLY Sbjct: 177 NETLTLKLY 185>XP_005268096 Length = 253 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NEALTLKLY 9 NE LTLKLY Sbjct: 177 NETLTLKLY 185>XP_006720308 Length = 274 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NEALTLKLY 9 NE LTLKLY Sbjct: 177 NETLTLKLY 185>XP_005268094 Length = 764 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NEALTLKLY 9 NE LTLKLY Sbjct: 177 NETLTLKLY 185>NP_000224 Length = 699 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 NEALTLKLY 9 NE++TLKLY Sbjct: 174 NESVTLKLY 182>NP_006176 Length = 2115 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NEALTLKLY 9 NE+LT++L+ Sbjct: 285 NESLTMRLH 293>NP_001273490 Length = 2101 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NEALTLKLY 9 NE+LT++L+ Sbjct: 285 NESLTMRLH 293>XP_006718633 Length = 2101 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NEALTLKLY 9 NE+LT++L+ Sbjct: 285 NESLTMRLH 293>XP_006718632 Length = 2115 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NEALTLKLY 9 NE+LT++L+ Sbjct: 285 NESLTMRLH 293>XP_006718631 Length = 2115 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NEALTLKLY 9 NE+LT++L+ Sbjct: 285 NESLTMRLH 293>XP_006718630 Length = 2115 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NEALTLKLY 9 NE+LT++L+ Sbjct: 285 NESLTMRLH 293>XP_006718629 Length = 2115 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NEALTLKLY 9 NE+LT++L+ Sbjct: 285 NESLTMRLH 293>XP_006718628 Length = 2115 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NEALTLKLY 9 NE+LT++L+ Sbjct: 285 NESLTMRLH 293>XP_006718627 Length = 2115 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NEALTLKLY 9 NE+LT++L+ Sbjct: 285 NESLTMRLH 293>XP_006718626 Length = 2115 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NEALTLKLY 9 NE+LT++L+ Sbjct: 285 NESLTMRLH 293>XP_006718625 Length = 2115 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 NEALTLKLY 9 NE+LT++L+ Sbjct: 285 NESLTMRLH 293>NP_444267 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NEALTLKL 8 N+A TLKL Sbjct: 67 NDAFTLKL 74>XP_005265754 Length = 412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NEALTLKL 8 N+A TLKL Sbjct: 67 NDAFTLKL 74>NP_001193933 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NEALTLKL 8 N+A TLKL Sbjct: 67 NDAFTLKL 74>NP_065170 Length = 369 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NEALTLKLY 9 NE L KLY Sbjct: 119 NEGLNQKLY 127>NP_001124335 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EALTLKLY 9 E LTLK Y Sbjct: 873 EILTLKTY 880>NP_006200 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EALTLKLY 9 E LTLK Y Sbjct: 900 EILTLKTY 907>NP_001035181 Length = 863 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EALTLKLY 9 E LTLK Y Sbjct: 848 EILTLKTY 855>NP_003130 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NEALTLK 7 +EALTLK Sbjct: 49 HEALTLK 55>NP_073728 Length = 1255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NEALTLK 7 NEA TLK Sbjct: 598 NEAATLK 604>XP_006716650 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EALTLKLY 9 E LTLK Y Sbjct: 896 EILTLKTY 903>XP_006716649 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EALTLKLY 9 E LTLK Y Sbjct: 921 EILTLKTY 928>XP_006716648 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EALTLKLY 9 E LTLK Y Sbjct: 921 EILTLKTY 928>XP_006716647 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EALTLKLY 9 E LTLK Y Sbjct: 925 EILTLKTY 932>XP_006712887 Length = 1255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NEALTLK 7 NEA TLK Sbjct: 598 NEAATLK 604>XP_005246168 Length = 1255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 NEALTLK 7 NEA TLK Sbjct: 598 NEAATLK 604>NP_570603 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EALTLKL 8 +ALTLKL Sbjct: 829 QALTLKL 835>NP_055018 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EALTLKL 8 +ALTLKL Sbjct: 851 QALTLKL 857Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.132 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 351,696 Number of extensions: 372 Number of successful extensions: 35 Number of sequences better than 10000.0: 35 Number of HSP's gapped: 35 Number of HSP's successfully gapped: 35 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |