Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_079455 17 4312 NP_001230075 17 4312 NP_002524 17 4312 NP_001230076 17 4312 NP_996671 17 4312 NP_597722 17 4312 NP_001273967 17 4312 NP_001273965 17 4312 XP_006717041 17 4312 XP_006711840 17 4312 XP_006711839 17 4312 XP_006711838 17 4312 XP_006711837 17 4312 XP_006711836 17 4312 XP_006711835 17 4312 XP_005273222 17 4312 XP_006711450 17 4312 XP_005273221 17 4312 NP_000048 16 5631 NP_001274177 16 5631 NP_001274175 16 5631 NP_705691 16 5631 NP_060286 16 5631 NP_001139197 16 5631 XP_006720695 16 5631 XP_006715119 16 5631 NP_079133 16 7355 NP_006601 16 7355 NP_060710 16 7355 NP_001273278 16 7355 NP_001185731 16 7355 NP_001185730 16 7355 NP_001268227 16 7355 NP_003751 16 7355 NP_060101 16 7355 XP_006711493 16 7355 XP_005245363 16 7355 XP_005245362 16 7355 NP_003669 15 9605 NP_056962 15 9605 NP_001002878 15 9605 NP_001002879 15 9605 NP_001002877 15 9605 NP_680479 15 9605 NP_596870 15 9605 XP_005261856 15 9605 XP_006724410 15 9605 XP_005261855 15 9605 XP_005261854 15 9605 XP_005251026 15 9605>NP_079455 Length = 1894 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 ND+TLK++ Sbjct: 1267 NDLTLKRL 1274>NP_001230075 Length = 667 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 ND+TLK++ Sbjct: 54 NDMTLKEV 61>NP_002524 Length = 856 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 ND+TLK++ Sbjct: 270 NDMTLKEV 277>NP_001230076 Length = 765 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 ND+TLK++ Sbjct: 179 NDMTLKEV 186>NP_996671 Length = 750 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 ND+TLK++ Sbjct: 164 NDMTLKEV 171>NP_597722 Length = 716 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NDVTLKKI 8 NDV +KKI Sbjct: 196 NDVIIKKI 203>NP_001273967 Length = 448 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NDVTLKKI 8 NDV +KKI Sbjct: 196 NDVIIKKI 203>NP_001273965 Length = 744 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NDVTLKKI 8 NDV +KKI Sbjct: 196 NDVIIKKI 203>XP_006717041 Length = 738 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NDVTLKKI 8 NDV +KKI Sbjct: 196 NDVIIKKI 203>XP_006711840 Length = 640 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 ND+TLK++ Sbjct: 54 NDMTLKEV 61>XP_006711839 Length = 695 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 ND+TLK++ Sbjct: 270 NDMTLKEV 277>XP_006711838 Length = 728 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 ND+TLK++ Sbjct: 270 NDMTLKEV 277>XP_006711837 Length = 738 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 ND+TLK++ Sbjct: 152 NDMTLKEV 159>XP_006711836 Length = 738 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 ND+TLK++ Sbjct: 152 NDMTLKEV 159>XP_006711835 Length = 828 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 ND+TLK++ Sbjct: 270 NDMTLKEV 277>XP_005273222 Length = 1823 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 ND+TLK++ Sbjct: 1282 NDLTLKRL 1289>XP_006711450 Length = 1952 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 ND+TLK++ Sbjct: 1282 NDLTLKRL 1289>XP_005273221 Length = 1974 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 ND+TLK++ Sbjct: 1282 NDLTLKRL 1289>NP_000048 Length = 1417 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NDVTLKKI 8 N VTLKK+ Sbjct: 1242 NTVTLKKL 1249>NP_001274177 Length = 1042 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NDVTLKKI 8 N VTLKK+ Sbjct: 867 NTVTLKKL 874>NP_001274175 Length = 1417 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NDVTLKKI 8 N VTLKK+ Sbjct: 1242 NTVTLKKL 1249>NP_705691 Length = 955 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NDVTLKK 7 +DVTLKK Sbjct: 907 DDVTLKK 913>NP_060286 Length = 379 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 N++T+KK+ Sbjct: 325 NEITIKKL 332>NP_001139197 Length = 379 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NDVTLKKI 8 N++T+KK+ Sbjct: 325 NEITIKKL 332>XP_006720695 Length = 763 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NDVTLKKI 8 N VTLKK+ Sbjct: 588 NTVTLKKL 595>XP_006715119 Length = 973 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 NDVTLKK 7 +DVTLKK Sbjct: 907 DDVTLKK 913>NP_079133 Length = 1844 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NDVTLKKIN 9 NDV KK+N Sbjct: 774 NDVLGKKLN 782>NP_006601 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NDVTLKKIN 9 ND+ L K+N Sbjct: 531 NDIALIKLN 539>NP_060710 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DVTLKKIN 9 DVTL+K++ Sbjct: 530 DVTLRKLD 537>NP_001273278 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DVTLKKIN 9 DVTL+K++ Sbjct: 430 DVTLRKLD 437>NP_001185731 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NDVTLKKIN 9 +DV L KIN Sbjct: 655 SDVVLDKIN 663>NP_001185730 Length = 1621 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NDVTLKKIN 9 +DV L KIN Sbjct: 648 SDVVLDKIN 656>NP_001268227 Length = 127 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VTLKKIN 9 VTL+KIN Sbjct: 73 VTLEKIN 79>NP_003751 Length = 1585 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NDVTLKKIN 9 +DV L KIN Sbjct: 649 SDVVLDKIN 657>NP_060101 Length = 1712 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NDVTLKKIN 9 NDV +KK N Sbjct: 719 NDVKVKKRN 727>XP_006711493 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DVTLKKIN 9 DVTL+K++ Sbjct: 446 DVTLRKLD 453>XP_005245363 Length = 723 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DVTLKKIN 9 DVTL+K++ Sbjct: 496 DVTLRKLD 503>XP_005245362 Length = 773 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DVTLKKIN 9 DVTL+K++ Sbjct: 546 DVTLRKLD 553>NP_003669 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTLKKIN 9 +TLKK+N Sbjct: 96 MTLKKLN 102>NP_056962 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NDVTLKKI 8 N++ LKKI Sbjct: 135 NEIELKKI 142>NP_001002878 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTLKKIN 9 +TLKK+N Sbjct: 96 MTLKKLN 102>NP_001002879 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTLKKIN 9 +TLKK+N Sbjct: 96 MTLKKLN 102>NP_001002877 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTLKKIN 9 +TLKK+N Sbjct: 96 MTLKKLN 102>NP_680479 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NDVTLKKI 8 N++ LKKI Sbjct: 135 NEIELKKI 142>NP_596870 Length = 5604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NDVTLKK 7 +DVT+KK Sbjct: 4387 SDVTIKK 4393>XP_005261856 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTLKKIN 9 +TLKK+N Sbjct: 96 MTLKKLN 102>XP_006724410 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTLKKIN 9 +TLKK+N Sbjct: 96 MTLKKLN 102>XP_005261855 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTLKKIN 9 +TLKK+N Sbjct: 96 MTLKKLN 102>XP_005261854 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTLKKIN 9 +TLKK+N Sbjct: 96 MTLKKLN 102>XP_005251026 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NDVTLKKI 8 N++ LKKI Sbjct: 135 NEIELKKI 142Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.129 0.329 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 413,470 Number of extensions: 682 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |