Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 21 229 XP_005262424 21 229 NP_001239586 18 1135 XP_006713052 18 1135 XP_006713051 18 1135 NP_061119 18 1482 NP_613258 18 1482 NP_613075 18 1482 NP_001035248 18 1482 NP_004884 18 1482 XP_005272192 18 1482 XP_005272191 18 1482 XP_005272189 18 1482 NP_001185771 18 1935 NP_006422 18 1935 NP_000129 17 3301 NP_036205 17 3301 NP_004317 17 4312 XP_005277475 17 4312 XP_005277474 17 4312 XP_006711546 17 4312 XP_005273028 17 4312 NP_006493 16 5631 NP_001138890 16 5631 XP_006724234 16 5631 XP_005261462 16 5631 XP_006715181 16 5631 XP_005249243 16 5631 NP_060644 16 5631 NP_001005284 16 5631 NP_000072 16 7355 NP_000382 16 7355 NP_000055 16 7355 NP_005132 16 7355 NP_001171670 16 7355 NP_001167522 16 7355 NP_006021 16 7355 NP_001278030 16 7355 NP_001005505 16 7355 NP_037384 16 7355 NP_057036 16 7355 XP_005250022 16 7355 XP_005265638 16 7355 XP_005273087 16 7355 XP_006711794 16 7355 XP_005273086 16 7355 XP_005273085 16 7355 XP_005273084 16 7355 NP_057336 15 9605 NP_006421 15 9605 NP_000304 15 9605 NP_006420 15 9605 NP_001159757 15 9605 NP_110379 15 9605 XP_006723584 15 9605 XP_006723583 15 9605 XP_006723582 15 9605 XP_005247683 15 9605 XP_006712120 15 9605 XP_005264512 15 9605 XP_005264511 15 9605 XP_006712119 15 9605 XP_005264510 15 9605 XP_006712118 15 9605 XP_005264509 15 9605 XP_005264508 15 9605 XP_006712117 15 9605 XP_005264507 15 9605 XP_005264506 15 9605 XP_006710114 15 9605>NP_722576 Length = 3080 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NDGFTVLSN 9 NDGFTVLS+ Sbjct: 1475 NDGFTVLSD 1483>XP_005262424 Length = 2875 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 NDGFTVLSN 9 NDGFTVLS+ Sbjct: 1270 NDGFTVLSD 1278>NP_001239586 Length = 630 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NDGFTVLSN 9 ND FTV+SN Sbjct: 186 NDKFTVVSN 194>XP_006713052 Length = 396 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NDGFTVLSN 9 ND FTV+SN Sbjct: 186 NDKFTVVSN 194>XP_006713051 Length = 618 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NDGFTVLSN 9 ND FTV+SN Sbjct: 186 NDKFTVVSN 194>NP_061119 Length = 372 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DGFTVLSN 9 DGFT+LS+ Sbjct: 181 DGFTILSS 188>NP_613258 Length = 372 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DGFTVLS 8 DGFTVLS Sbjct: 181 DGFTVLS 187>NP_613075 Length = 369 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DGFTVLS 8 DGFTVLS Sbjct: 181 DGFTVLS 187>NP_001035248 Length = 371 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DGFTVLS 8 DGFTVLS Sbjct: 180 DGFTVLS 186>NP_004884 Length = 371 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DGFTVLS 8 DGFTVLS Sbjct: 180 DGFTVLS 186>XP_005272192 Length = 198 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DGFTVLS 8 DGFTVLS Sbjct: 180 DGFTVLS 186>XP_005272191 Length = 199 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DGFTVLS 8 DGFTVLS Sbjct: 181 DGFTVLS 187>XP_005272189 Length = 368 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DGFTVLS 8 DGFTVLS Sbjct: 180 DGFTVLS 186>NP_001185771 Length = 488 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NDGFTVLSN 9 NDG T+L N Sbjct: 18 NDGATILKN 26>NP_006422 Length = 535 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NDGFTVLSN 9 NDG T+L N Sbjct: 65 NDGATILKN 73>NP_000129 Length = 2871 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NDGFTVLSN 9 NDGFT N Sbjct: 2319 NDGFTASPN 2327>NP_036205 Length = 541 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NDGFTVLS 8 NDG T+LS Sbjct: 72 NDGATILS 79>NP_004317 Length = 1426 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DGFTVLSN 9 D FTVL N Sbjct: 1202 DSFTVLGN 1209>XP_005277475 Length = 1352 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DGFTVLSN 9 D FTVL N Sbjct: 1128 DSFTVLGN 1135>XP_005277474 Length = 1414 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DGFTVLSN 9 D FTVL N Sbjct: 1190 DSFTVLGN 1197>XP_006711546 Length = 1426 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DGFTVLSN 9 D FTVL N Sbjct: 1202 DSFTVLGN 1209>XP_005273028 Length = 1426 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DGFTVLSN 9 D FTVL N Sbjct: 1202 DSFTVLGN 1209>NP_006493 Length = 713 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NDGFTVLSN 9 +D FTV+ N Sbjct: 397 HDAFTVIKN 405>NP_001138890 Length = 2481 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DGFTVLSN 9 +GF+++SN Sbjct: 2057 EGFSIISN 2064>XP_006724234 Length = 2363 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DGFTVLSN 9 +GF+++SN Sbjct: 1939 EGFSIISN 1946>XP_005261462 Length = 2473 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DGFTVLSN 9 +GF+++SN Sbjct: 2049 EGFSIISN 2056>XP_006715181 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NDGFTVLSN 9 +D FTV+ N Sbjct: 245 HDAFTVIKN 253>XP_005249243 Length = 651 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NDGFTVLSN 9 +D FTV+ N Sbjct: 335 HDAFTVIKN 343>NP_060644 Length = 1059 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DGFTVLSN 9 +GFTVL N Sbjct: 259 NGFTVLVN 266>NP_001005284 Length = 327 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GFTVLSN 9 GFTVLS+ Sbjct: 219 GFTVLSS 225>NP_000072 Length = 3801 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NDGFTVLSN 9 N GF++L+N Sbjct: 2373 NRGFSLLAN 2381>NP_000382 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NDGFTVLSN 9 +DG+ V+SN Sbjct: 456 SDGYWVVSN 464>NP_000055 Length = 1663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NDGFTV 6 N+GFTV Sbjct: 1327 NEGFTV 1332>NP_005132 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NDGFTVLSN 9 N G+TV+ N Sbjct: 276 NGGWTVIQN 284>NP_001171670 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NDGFTVLSN 9 N G+TV+ N Sbjct: 217 NGGWTVIQN 225>NP_001167522 Length = 1150 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GFTVLSN 9 GF VLSN Sbjct: 897 GFLVLSN 903>NP_006021 Length = 1143 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GFTVLSN 9 GF VLSN Sbjct: 890 GFLVLSN 896>NP_001278030 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GFTVLSN 9 GF VLSN Sbjct: 821 GFLVLSN 827>NP_001005505 Length = 1145 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GFTVLSN 9 GF VLSN Sbjct: 890 GFLVLSN 896>NP_037384 Length = 188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 NDGFT 5 NDGFT Sbjct: 35 NDGFT 39>NP_057036 Length = 243 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DGFTVLS 8 D FTVLS Sbjct: 21 DSFTVLS 27>XP_005250022 Length = 165 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 NDGFT 5 NDGFT Sbjct: 35 NDGFT 39>XP_005265638 Length = 1144 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GFTVLSN 9 GF VLSN Sbjct: 891 GFLVLSN 897>XP_005273087 Length = 2788 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NDGFTVLSN 9 N GF++L+N Sbjct: 2373 NRGFSLLAN 2381>XP_006711794 Length = 3022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NDGFTVLSN 9 N GF++L+N Sbjct: 1594 NRGFSLLAN 1602>XP_005273086 Length = 3264 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NDGFTVLSN 9 N GF++L+N Sbjct: 2373 NRGFSLLAN 2381>XP_005273085 Length = 3755 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NDGFTVLSN 9 N GF++L+N Sbjct: 2327 NRGFSLLAN 2335>XP_005273084 Length = 3801 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NDGFTVLSN 9 N GF++L+N Sbjct: 2373 NRGFSLLAN 2381>NP_057336 Length = 4857 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NDGFTV 6 +DGFTV Sbjct: 659 DDGFTV 664>NP_006421 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NDGFTVL 7 NDG T+L Sbjct: 72 NDGATIL 78>NP_000304 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DGFTVLSN 9 +GF +LSN Sbjct: 188 NGFVMLSN 195>NP_006420 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NDGFTVL 7 NDG T+L Sbjct: 60 NDGATIL 66>NP_001159757 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NDGFTVL 7 NDG T+L Sbjct: 16 NDGATIL 22>NP_110379 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NDGFTVL 7 NDG T+L Sbjct: 56 NDGATIL 62>XP_006723584 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NDGFTVLSN 9 ND VLSN Sbjct: 626 NDSHKVLSN 634>XP_006723583 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NDGFTVLSN 9 ND VLSN Sbjct: 626 NDSHKVLSN 634>XP_006723582 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NDGFTVLSN 9 ND VLSN Sbjct: 626 NDSHKVLSN 634>XP_005247683 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DGFTVLSN 9 +GF +LSN Sbjct: 220 NGFVMLSN 227>XP_006712120 Length = 4812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NDGFTV 6 +DGFTV Sbjct: 659 DDGFTV 664>XP_005264512 Length = 4840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NDGFTV 6 +DGFTV Sbjct: 659 DDGFTV 664>XP_005264511 Length = 4847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NDGFTV 6 +DGFTV Sbjct: 659 DDGFTV 664>XP_006712119 Length = 4851 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NDGFTV 6 +DGFTV Sbjct: 659 DDGFTV 664>XP_005264510 Length = 4861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NDGFTV 6 +DGFTV Sbjct: 659 DDGFTV 664>XP_006712118 Length = 4864 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NDGFTV 6 +DGFTV Sbjct: 659 DDGFTV 664>XP_005264509 Length = 4870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NDGFTV 6 +DGFTV Sbjct: 659 DDGFTV 664>XP_005264508 Length = 4875 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NDGFTV 6 +DGFTV Sbjct: 659 DDGFTV 664>XP_006712117 Length = 4878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NDGFTV 6 +DGFTV Sbjct: 659 DDGFTV 664>XP_005264507 Length = 4880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NDGFTV 6 +DGFTV Sbjct: 659 DDGFTV 664>XP_005264506 Length = 4884 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NDGFTV 6 +DGFTV Sbjct: 659 DDGFTV 664>XP_006710114 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NDGFTVLSN 9 ND VLSN Sbjct: 408 NDSHKVLSN 416Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.133 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 584,046 Number of extensions: 1105 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |