Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 20 390 XP_005266922 18 1482 NP_001025029 18 1482 NP_005520 17 4312 NP_001263995 17 4312 NP_001263994 17 4312 XP_005246745 17 4312 XP_006710661 17 4312 XP_005245920 17 4312 XP_006710660 17 4312 XP_006710659 17 4312 XP_006710658 17 4312 XP_006710657 17 4312 NP_001139317 16 5631 NP_598334 16 5631 NP_002932 16 5631 NP_001161052 16 5631 NP_055663 16 5631 XP_005255055 16 5631 XP_005255054 16 5631 XP_006713341 16 5631 XP_006713340 16 5631 XP_006713339 16 5631 NP_001073935 16 7355 NP_001120916 15 9605 NP_001001547 15 9605 NP_000063 15 9605 NP_006197 15 9605 NP_001001548 15 9605 NP_001120915 15 9605 NP_002600 15 9605 NP_000213 15 9605 NP_001087241 15 9605 NP_001276838 15 9605 NP_001276837 15 9605 NP_001276840 15 9605 NP_653223 15 9605 NP_116178 15 9605 NP_004451 15 9605 NP_001029345 15 9605 NP_060639 15 9605 XP_006719162 15 9605 XP_005253462 15 9605 XP_005251138 15 9605 XP_005250772 15 9605 XP_005250771 15 9605 XP_005250770 15 9605 XP_005268521 15 9605 XP_006714104 15 9605 XP_005265800 15 9605 XP_006714103 15 9605 XP_006714102 15 9605 XP_005265799 15 9605 XP_005265798 15 9605 XP_005265797 15 9605>NP_004110 Length = 993 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 NATAYGIS 8 NATAYGIS Sbjct: 626 NATAYGIS 633>XP_005266922 Length = 408 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAYGISN 9 AT YGISN Sbjct: 227 ATLYGISN 234>NP_001025029 Length = 408 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ATAYGISN 9 AT YGISN Sbjct: 227 ATLYGISN 234>NP_005520 Length = 4391 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NATAYGISN 9 N TA+GIS+ Sbjct: 3836 NLTAHGISH 3844>NP_001263995 Length = 218 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NATAYGISN 9 N + YGISN Sbjct: 144 NDSLYGISN 152>NP_001263994 Length = 218 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NATAYGISN 9 N + YGISN Sbjct: 144 NDSLYGISN 152>XP_005246745 Length = 244 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NATAYGISN 9 N + YGISN Sbjct: 170 NDSLYGISN 178>XP_006710661 Length = 4057 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NATAYGISN 9 N TA+GIS+ Sbjct: 4025 NLTAHGISH 4033>XP_005245920 Length = 4392 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NATAYGISN 9 N TA+GIS+ Sbjct: 3837 NLTAHGISH 3845>XP_006710660 Length = 4397 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NATAYGISN 9 N TA+GIS+ Sbjct: 3842 NLTAHGISH 3850>XP_006710659 Length = 4556 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NATAYGISN 9 N TA+GIS+ Sbjct: 4001 NLTAHGISH 4009>XP_006710658 Length = 4563 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NATAYGISN 9 N TA+GIS+ Sbjct: 4008 NLTAHGISH 4016>XP_006710657 Length = 4579 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NATAYGISN 9 N TA+GIS+ Sbjct: 4024 NLTAHGISH 4032>NP_001139317 Length = 1551 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATAYGISN 9 A AYGIS+ Sbjct: 601 ANAYGISD 608>NP_598334 Length = 1606 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATAYGISN 9 A AYGIS+ Sbjct: 601 ANAYGISD 608>NP_002932 Length = 1651 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATAYGISN 9 A AYGIS+ Sbjct: 637 ANAYGISD 644>NP_001161052 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATAYGISN 9 ATA+GI N Sbjct: 473 ATAFGILN 480>NP_055663 Length = 683 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATAYGISN 9 ATA+GI N Sbjct: 624 ATAFGILN 631>XP_005255055 Length = 683 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATAYGISN 9 ATA+GI N Sbjct: 624 ATAFGILN 631>XP_005255054 Length = 683 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATAYGISN 9 ATA+GI N Sbjct: 624 ATAFGILN 631>XP_006713341 Length = 1600 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATAYGISN 9 A AYGIS+ Sbjct: 586 ANAYGISD 593>XP_006713340 Length = 1615 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATAYGISN 9 A AYGIS+ Sbjct: 601 ANAYGISD 608>XP_006713339 Length = 1616 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATAYGISN 9 A AYGIS+ Sbjct: 602 ANAYGISD 609>NP_001073935 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ATAYGISN 9 AT YG+S+ Sbjct: 142 ATKYGVSS 149>NP_001120916 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 NATAYGI 7 N T+YG+ Sbjct: 321 NCTSYGV 327>NP_001001547 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 NATAYGI 7 N T+YG+ Sbjct: 321 NCTSYGV 327>NP_000063 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 NATAYGI 7 N T+YG+ Sbjct: 321 NCTSYGV 327>NP_006197 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TAYGIS 8 TAYG+S Sbjct: 611 TAYGLS 616>NP_001001548 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 NATAYGI 7 N T+YG+ Sbjct: 321 NCTSYGV 327>NP_001120915 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 NATAYGI 7 N T+YG+ Sbjct: 321 NCTSYGV 327>NP_002600 Length = 1106 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ATAYGISN 9 ATA+G+S+ Sbjct: 617 ATAHGLSH 624>NP_000213 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ATAYGI 7 ATAYG+ Sbjct: 606 ATAYGL 611>NP_001087241 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ATAYGI 7 ATAYG+ Sbjct: 602 ATAYGL 607>NP_001276838 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 NATAYGI 7 N T+YG+ Sbjct: 261 NCTSYGV 267>NP_001276837 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 NATAYGI 7 N T+YG+ Sbjct: 282 NCTSYGV 288>NP_001276840 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 NATAYGI 7 N T+YG+ Sbjct: 245 NCTSYGV 251>NP_653223 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ATAYGI 7 ATAYG+ Sbjct: 37 ATAYGL 42>NP_116178 Length = 1025 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 NATAYG 6 NAT YG Sbjct: 910 NATVYG 915>NP_004451 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NATAYGIS 8 NA+ YG+S Sbjct: 99 NASNYGLS 106>NP_001029345 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NATAYGISN 9 N+T YG+++ Sbjct: 849 NSTEYGLAS 857>NP_060639 Length = 1747 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NATAYGIS 8 N TA GIS Sbjct: 699 NTTAVGIS 706>XP_006719162 Length = 1676 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NATAYGIS 8 N TA GIS Sbjct: 699 NTTAVGIS 706>XP_005253462 Length = 1747 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NATAYGIS 8 N TA GIS Sbjct: 699 NTTAVGIS 706>XP_005251138 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 NATAYG 6 NAT YG Sbjct: 922 NATVYG 927>XP_005250772 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 NATAYGI 7 N T+YG+ Sbjct: 321 NCTSYGV 327>XP_005250771 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 NATAYGI 7 N T+YG+ Sbjct: 321 NCTSYGV 327>XP_005250770 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 NATAYGI 7 N T+YG+ Sbjct: 321 NCTSYGV 327>XP_005268521 Length = 1042 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ATAYGISN 9 ATA+G+S+ Sbjct: 553 ATAHGLSH 560>XP_006714104 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TAYGIS 8 TAYG+S Sbjct: 636 TAYGLS 641>XP_005265800 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TAYGIS 8 TAYG+S Sbjct: 611 TAYGLS 616>XP_006714103 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TAYGIS 8 TAYG+S Sbjct: 633 TAYGLS 638>XP_006714102 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TAYGIS 8 TAYG+S Sbjct: 636 TAYGLS 641>XP_005265799 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ATAYGI 7 ATAYG+ Sbjct: 603 ATAYGL 608>XP_005265798 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ATAYGI 7 ATAYG+ Sbjct: 607 ATAYGL 612>XP_005265797 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ATAYGI 7 ATAYG+ Sbjct: 607 ATAYGL 612Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.116 0.315 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 419,107 Number of extensions: 726 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |