Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155973 18 1482 NP_055903 18 1482 NP_004432 18 1482 NP_005949 18 1482 NP_004215 17 3301 XP_005274829 17 3301 NP_002746 17 4312 NP_059115 17 4312 XP_005254598 17 4312 XP_006720671 17 4312 NP_005950 16 5631 NP_612567 16 5631 NP_003257 16 5631 NP_612564 16 5631 NP_067018 16 5631 NP_008915 16 5631 NP_001153572 16 5631 NP_955360 16 5631 NP_878268 16 5631 NP_001193987 16 7355 NP_004434 16 7355 XP_006723678 16 7355 XP_006720771 16 7355 NP_003236 16 7355 NP_001092007 15 9605 NP_689499 15 9605 NP_001161743 15 9605 NP_694547 15 9605 NP_079146 15 9605 NP_001167621 15 9605 NP_003382 15 9605 NP_878899 15 9605 NP_055532 15 9605 NP_001185739 15 9605 NP_001273142 15 9605 NP_001273141 15 9605 NP_115632 15 9605 NP_003618 15 9605 NP_060688 15 9605 NP_001631 15 9605 XP_006723575 15 9605 XP_005259502 15 9605 XP_005274415 15 9605 XP_005274414 15 9605 XP_005266139 15 9605 XP_005266136 15 9605 XP_006717167 15 9605 XP_006717166 15 9605 XP_006717165 15 9605 XP_006716172 15 9605 XP_006713597 15 9605 XP_006713596 15 9605 XP_006713595 15 9605 XP_006713594 15 9605 XP_005247222 15 9605 XP_005265155 15 9605 XP_005265154 15 9605 XP_005246148 15 9605 XP_005246145 15 9605 XP_006712675 15 9605 NP_001012780 15 9605 NP_001012777 15 9605>NP_001155973 Length = 1833 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 NAGV FVVS Sbjct: 352 NAGVNFVVS 360>NP_055903 Length = 1723 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 NAGV FVVS Sbjct: 352 NAGVNFVVS 360>NP_004432 Length = 984 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 AGVIFVVS 9 AGV+FVVS Sbjct: 548 AGVVFVVS 555>NP_005949 Length = 350 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 NAG IFVVS Sbjct: 60 NAGNIFVVS 68>NP_004215 Length = 617 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 N+G IFVVS Sbjct: 61 NSGNIFVVS 69>XP_005274829 Length = 241 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 N+G IFVVS Sbjct: 61 NSGNIFVVS 69>NP_002746 Length = 393 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NAGVIFVVS 9 N GV+F VS Sbjct: 78 NGGVVFKVS 86>NP_059115 Length = 505 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 NAGVIFVV 8 +AG+IFV+ Sbjct: 250 DAGIIFVI 257>XP_005254598 Length = 284 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NAGVIFVVS 9 N GV+F VS Sbjct: 78 NGGVVFKVS 86>XP_006720671 Length = 367 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NAGVIFVVS 9 N GV+F VS Sbjct: 78 NGGVVFKVS 86>NP_005950 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 NAG +F+VS Sbjct: 73 NAGNLFLVS 81>NP_612567 Length = 639 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGVIFVV 8 AG+IF+V Sbjct: 564 AGIIFIV 570>NP_003257 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGVIFVV 8 AG+IF+V Sbjct: 724 AGIIFIV 730>NP_612564 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGVIFVV 8 AG+IF+V Sbjct: 764 AGIIFIV 770>NP_067018 Length = 220 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AGVIFVVS 9 +G++FV+S Sbjct: 121 SGIVFVIS 128>NP_008915 Length = 228 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AGVIFVVS 9 AG++F++S Sbjct: 120 AGIVFILS 127>NP_001153572 Length = 207 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AGVIFVVS 9 AG++F++S Sbjct: 99 AGIVFILS 106>NP_955360 Length = 225 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AGVIFVVS 9 AG+IF+++ Sbjct: 122 AGIIFIIT 129>NP_878268 Length = 226 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AGVIFVVS 9 AG++F++S Sbjct: 118 AGIVFILS 125>NP_001193987 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NAGVIFVV 8 N G+IF++ Sbjct: 26 NTGIIFIM 33>NP_004434 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AGVIFVVS 9 AG++FVV+ Sbjct: 566 AGLVFVVA 573>XP_006723678 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 +AG+IFV S Sbjct: 184 DAGIIFVGS 192>XP_006720771 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 NAGVIFVV 8 N G+IF++ Sbjct: 26 NTGIIFIM 33>NP_003236 Length = 693 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 +AG+IFV S Sbjct: 159 DAGIIFVGS 167>NP_001092007 Length = 1342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 +A ++FVVS Sbjct: 518 DASILFVVS 526>NP_689499 Length = 1317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 +A ++FVVS Sbjct: 493 DASILFVVS 501>NP_001161743 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AGVIFVVS 9 AG++FVV+ Sbjct: 267 AGLLFVVT 274>NP_694547 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AGVIFVVS 9 AG++FVV+ Sbjct: 271 AGLLFVVT 278>NP_079146 Length = 1606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NAGVIF 6 NAGV+F Sbjct: 1313 NAGVLF 1318>NP_001167621 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GVIFVV 8 GVIFVV Sbjct: 91 GVIFVV 96>NP_003382 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 +AGV+F ++ Sbjct: 116 SAGVVFAIT 124>NP_878899 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GVIFVV 8 GVIFVV Sbjct: 91 GVIFVV 96>NP_055532 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NAGVIF 6 NAGV+F Sbjct: 554 NAGVLF 559>NP_001185739 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NAGVIFVV 8 +AGV FVV Sbjct: 190 DAGVAFVV 197>NP_001273142 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NAGVIFVV 8 N G+IF+V Sbjct: 160 NYGIIFLV 167>NP_001273141 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NAGVIFVV 8 N G+IF+V Sbjct: 200 NYGIIFLV 207>NP_115632 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NAGVIFVV 8 N G+IF+V Sbjct: 304 NYGIIFLV 311>NP_003618 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NAGVIFVV 8 +AGV FVV Sbjct: 190 DAGVAFVV 197>NP_060688 Length = 1247 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGVIFVVS 9 AGVIF+ S Sbjct: 696 AGVIFINS 703>NP_001631 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NAGVIFV 7 +AGV+FV Sbjct: 255 DAGVVFV 261>XP_006723575 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NAGVIF 6 NAGV+F Sbjct: 554 NAGVLF 559>XP_005259502 Length = 1313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 NAGVIF 6 NAGV+F Sbjct: 567 NAGVLF 572>XP_005274415 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NAGVIFVV 8 +AGV FVV Sbjct: 206 DAGVAFVV 213>XP_005274414 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NAGVIFVV 8 +AGV FVV Sbjct: 216 DAGVAFVV 223>XP_005266139 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 +A ++FVVS Sbjct: 519 DASILFVVS 527>XP_005266136 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 +A ++FVVS Sbjct: 519 DASILFVVS 527>XP_006717167 Length = 1309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 +A ++FVVS Sbjct: 485 DASILFVVS 493>XP_006717166 Length = 1316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 +A ++FVVS Sbjct: 492 DASILFVVS 500>XP_006717165 Length = 1343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 +A ++FVVS Sbjct: 519 DASILFVVS 527>XP_006716172 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 NAGVIFVVS 9 +AGV+F ++ Sbjct: 87 SAGVVFAIT 95>XP_006713597 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GVIFVV 8 GVIFVV Sbjct: 66 GVIFVV 71>XP_006713596 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GVIFVV 8 GVIFVV Sbjct: 66 GVIFVV 71>XP_006713595 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GVIFVV 8 GVIFVV Sbjct: 76 GVIFVV 81>XP_006713594 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GVIFVV 8 GVIFVV Sbjct: 76 GVIFVV 81>XP_005247222 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AGVIFVVS 9 AG++FVV+ Sbjct: 271 AGLLFVVT 278>XP_005265155 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NAGVIFV 7 +AGV+FV Sbjct: 154 DAGVVFV 160>XP_005265154 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 NAGVIFV 7 +AGV+FV Sbjct: 209 DAGVVFV 215>XP_005246148 Length = 1108 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGVIFVVS 9 AGVIF+ S Sbjct: 557 AGVIFINS 564>XP_005246145 Length = 1236 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGVIFVVS 9 AGVIF+ S Sbjct: 685 AGVIFINS 692>XP_006712675 Length = 1248 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGVIFVVS 9 AGVIF+ S Sbjct: 697 AGVIFINS 704>NP_001012780 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AGVIFV 7 AGVIFV Sbjct: 108 AGVIFV 113>NP_001012777 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AGVIFV 7 AGVIFV Sbjct: 108 AGVIFV 113Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.143 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 414,117 Number of extensions: 932 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |