Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 509 NP_671714 20 509 XP_006715890 20 509 XP_005250160 20 509 XP_005250159 20 509 NP_079526 17 4312 NP_001073286 16 5631 NP_000201 16 5631 NP_000341 16 5631 NP_001273476 16 5631 NP_001020109 16 5631 NP_001269793 16 5631 NP_110434 16 5631 NP_115995 16 5631 NP_001020110 16 5631 XP_006719714 16 5631 XP_006719712 16 5631 XP_006719711 16 5631 XP_006712574 16 5631 XP_006712573 16 5631 NP_000708 16 7355 NP_001270144 16 7355 NP_005422 16 7355 NP_001270058 16 7355 XP_006724194 16 7355 XP_006724193 16 7355 XP_006724191 16 7355 XP_006724190 16 7355 XP_005261279 16 7355 XP_006724189 16 7355 XP_005257696 16 7355 XP_006718611 16 7355 XP_006718610 16 7355 NP_001034841 16 7355 NP_001245200 15 9605 NP_000240 15 9605 NP_001161089 15 9605 NP_001073291 15 9605 NP_000417 15 9605 NP_061869 15 9605 NP_001136112 15 9605 NP_060268 15 9605 NP_001273700 15 9605 NP_115593 15 9605 NP_942592 15 9605 NP_060217 15 9605 NP_065741 15 9605 XP_006722063 15 9605 XP_006722062 15 9605 XP_006722061 15 9605 XP_006722060 15 9605 XP_005257605 15 9605 XP_005257604 15 9605 XP_006722059 15 9605 XP_005267039 15 9605 XP_005267038 15 9605 XP_005265730 15 9605 XP_005265729 15 9605 XP_005265728 15 9605 XP_005265724 15 9605 XP_005265218 15 9605>NP_005742 Length = 3907 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NAGTQINLQ 9 NAG QINLQ Sbjct: 2801 NAGIQINLQ 2809>NP_671714 Length = 3899 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NAGTQINLQ 9 NAG QINLQ Sbjct: 2793 NAGIQINLQ 2801>XP_006715890 Length = 3860 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NAGTQINLQ 9 NAG QINLQ Sbjct: 2754 NAGIQINLQ 2762>XP_005250160 Length = 3939 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NAGTQINLQ 9 NAG QINLQ Sbjct: 2833 NAGIQINLQ 2841>XP_005250159 Length = 3952 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NAGTQINLQ 9 NAG QINLQ Sbjct: 2846 NAGIQINLQ 2854>NP_079526 Length = 523 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GTQINLQ 9 GT++NLQ Sbjct: 352 GTEVNLQ 358>NP_001073286 Length = 1091 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NAGTQINL 8 NAGTQ+ + Sbjct: 992 NAGTQVRV 999>NP_000201 Length = 1073 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NAGTQINL 8 NAGTQ+ + Sbjct: 992 NAGTQVRV 999>NP_000341 Length = 2273 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 NAGTQINLQ 9 N GTQ+ LQ Sbjct: 1345 NTGTQLVLQ 1353>NP_001273476 Length = 475 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAGTQINLQ 9 N GTQ++L+ Sbjct: 3 NTGTQMDLE 11>NP_001020109 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NAGTQINLQ 9 NAG +N+Q Sbjct: 134 NAGVSMNIQ 142>NP_001269793 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NAGTQINLQ 9 NAG +N+Q Sbjct: 141 NAGVSMNIQ 149>NP_110434 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NAGTQINLQ 9 NAG +N+Q Sbjct: 141 NAGVSMNIQ 149>NP_115995 Length = 557 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAGTQINLQ 9 N GTQ++L+ Sbjct: 15 NTGTQMDLE 23>NP_001020110 Length = 499 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NAGTQINLQ 9 NAG +N+Q Sbjct: 137 NAGVSMNIQ 145>XP_006719714 Length = 270 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAGTQINLQ 9 N GTQ++L+ Sbjct: 3 NTGTQMDLE 11>XP_006719712 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAGTQINLQ 9 N GTQ++L+ Sbjct: 3 NTGTQMDLE 11>XP_006719711 Length = 602 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NAGTQINLQ 9 N GTQ++L+ Sbjct: 3 NTGTQMDLE 11>XP_006712574 Length = 1058 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NAGTQINL 8 NAGTQ+ + Sbjct: 977 NAGTQVRV 984>XP_006712573 Length = 1076 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NAGTQINL 8 NAGTQ+ + Sbjct: 977 NAGTQVRV 984>NP_000708 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGTQIN 7 AGTQ+N Sbjct: 172 AGTQVN 177>NP_001270144 Length = 198 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AGTQINLQ 9 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>NP_005422 Length = 280 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 NAGTQINLQ 9 N G +NLQ Sbjct: 161 NGGESVNLQ 169>NP_001270058 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AGTQINLQ 9 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>XP_006724194 Length = 210 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AGTQINLQ 9 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>XP_006724193 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AGTQINLQ 9 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>XP_006724191 Length = 243 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AGTQINLQ 9 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>XP_006724190 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AGTQINLQ 9 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>XP_005261279 Length = 255 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AGTQINLQ 9 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>XP_006724189 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AGTQINLQ 9 AGT +N+Q Sbjct: 41 AGTPVNVQ 48>XP_005257696 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGTQIN 7 AGTQ+N Sbjct: 196 AGTQVN 201>XP_006718611 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GTQINLQ 9 GT +NLQ Sbjct: 258 GTMVNLQ 264>XP_006718610 Length = 489 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GTQINLQ 9 GT +NLQ Sbjct: 314 GTMVNLQ 320>NP_001034841 Length = 541 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GTQINLQ 9 GT +NLQ Sbjct: 366 GTMVNLQ 372>NP_001245200 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NAGTQINLQ 9 N GTQI ++ Sbjct: 145 NQGTQITVE 153>NP_000240 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NAGTQINLQ 9 N GTQI ++ Sbjct: 145 NQGTQITVE 153>NP_001161089 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NAGTQINLQ 9 N GTQI ++ Sbjct: 47 NQGTQITVE 55>NP_001073291 Length = 3118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NAGTQINL 8 + GT+INL Sbjct: 2541 DVGTEINL 2548>NP_000417 Length = 3122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NAGTQINL 8 + GT+INL Sbjct: 2545 DVGTEINL 2552>NP_061869 Length = 1690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGTQIN 7 AGTQ+N Sbjct: 783 AGTQLN 788>NP_001136112 Length = 1726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGTQIN 7 AGTQ+N Sbjct: 783 AGTQLN 788>NP_060268 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 NAGTQINL 8 N GT +N+ Sbjct: 219 NGGTNVNM 226>NP_001273700 Length = 2490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NAGTQIN 7 NAG +IN Sbjct: 1091 NAGAEIN 1097>NP_115593 Length = 2603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NAGTQIN 7 NAG +IN Sbjct: 1204 NAGAEIN 1210>NP_942592 Length = 2352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NAGTQIN 7 NAG +IN Sbjct: 953 NAGAEIN 959>NP_060217 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NAGTQIN 7 NAG +IN Sbjct: 1176 NAGAEIN 1182>NP_065741 Length = 2617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NAGTQIN 7 NAG +IN Sbjct: 1176 NAGAEIN 1182>XP_006722063 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGTQIN 7 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_006722062 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGTQIN 7 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_006722061 Length = 1913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGTQIN 7 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_006722060 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGTQIN 7 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_005257605 Length = 1926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGTQIN 7 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_005257604 Length = 1962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGTQIN 7 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_006722059 Length = 1965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AGTQIN 7 AGTQ+N Sbjct: 1019 AGTQLN 1024>XP_005267039 Length = 3206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NAGTQINL 8 + GT+INL Sbjct: 2629 DVGTEINL 2636>XP_005267038 Length = 3210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 NAGTQINL 8 + GT+INL Sbjct: 2633 DVGTEINL 2640>XP_005265730 Length = 1480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NAGTQIN 7 NAG +IN Sbjct: 1204 NAGAEIN 1210>XP_005265729 Length = 1543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NAGTQIN 7 NAG +IN Sbjct: 1204 NAGAEIN 1210>XP_005265728 Length = 2351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NAGTQIN 7 NAG +IN Sbjct: 952 NAGAEIN 958>XP_005265724 Length = 2602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 NAGTQIN 7 NAG +IN Sbjct: 1203 NAGAEIN 1209>XP_005265218 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 NAGTQINLQ 9 N GTQI ++ Sbjct: 145 NQGTQITVE 153Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.122 0.318 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 471,681 Number of extensions: 673 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |