Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 21 229 NP_001075109 21 229 NP_001019833 17 2528 NP_000961 17 2528 XP_006719612 17 2528 XP_006719611 17 2528 XP_006719610 17 2528 XP_006719609 17 2528 NP_001186346 17 3301 XP_006725396 17 3301 XP_006725395 17 3301 XP_006725393 17 3301 XP_006722057 17 3301 XP_006722056 17 3301 XP_006722054 17 3301 NP_079535 16 5631 NP_751898 16 5631 NP_002432 16 5631 NP_751897 16 5631 NP_001148 16 7355 NP_665875 16 7355 NP_001265336 16 7355 NP_001265337 16 7355 NP_001265338 16 7355 NP_665876 16 7355 XP_006717877 16 7355 XP_006717876 16 7355 XP_005269799 16 7355 XP_005269798 16 7355 NP_057475 15 9605 NP_002059 15 9605 NP_001171705 15 9605 NP_001171702 15 9605 NP_001171703 15 9605 NP_001171704 15 9605 XP_005261497 15 9605 XP_005261496 15 9605 XP_006724258 15 9605 NP_066938 15 9605>NP_008835 Length = 4128 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MYKRMYAAL 9 MY+RMYAAL Sbjct: 3609 MYERMYAAL 3617Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YKRMYAA 8 YK +YAA Sbjct: 2312 YKEVYAA 2318>NP_001075109 Length = 4097 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MYKRMYAAL 9 MY+RMYAAL Sbjct: 3609 MYERMYAAL 3617Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YKRMYAA 8 YK +YAA Sbjct: 2312 YKEVYAA 2318>NP_001019833 Length = 288 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MYKRMYAA 8 MYKR Y+A Sbjct: 68 MYKRKYSA 75>NP_000961 Length = 288 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MYKRMYAA 8 MYKR Y+A Sbjct: 68 MYKRKYSA 75>XP_006719612 Length = 288 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MYKRMYAA 8 MYKR Y+A Sbjct: 68 MYKRKYSA 75>XP_006719611 Length = 288 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MYKRMYAA 8 MYKR Y+A Sbjct: 68 MYKRKYSA 75>XP_006719610 Length = 288 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MYKRMYAA 8 MYKR Y+A Sbjct: 68 MYKRKYSA 75>XP_006719609 Length = 288 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MYKRMYAA 8 MYKR Y+A Sbjct: 68 MYKRKYSA 75>NP_001186346 Length = 1491 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 YKRMYAAL 9 +KR+YAAL Sbjct: 715 WKRVYAAL 722>XP_006725396 Length = 1144 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 YKRMYAAL 9 +KR+YAAL Sbjct: 715 WKRVYAAL 722>XP_006725395 Length = 1249 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 YKRMYAAL 9 +KR+YAAL Sbjct: 715 WKRVYAAL 722>XP_006725393 Length = 1473 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 YKRMYAAL 9 +KR+YAAL Sbjct: 697 WKRVYAAL 704>XP_006722057 Length = 1144 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 YKRMYAAL 9 +KR+YAAL Sbjct: 715 WKRVYAAL 722>XP_006722056 Length = 1249 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 YKRMYAAL 9 +KR+YAAL Sbjct: 715 WKRVYAAL 722>XP_006722054 Length = 1473 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 YKRMYAAL 9 +KR+YAAL Sbjct: 697 WKRVYAAL 704>NP_079535 Length = 822 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MYKRMYAAL 9 +YK +Y+AL Sbjct: 353 LYKTVYSAL 361>NP_751898 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MYKRMYAAL 9 +YK +Y+AL Sbjct: 336 LYKTVYSAL 344>NP_002432 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MYKRMYAAL 9 +YK +Y+AL Sbjct: 336 LYKTVYSAL 344>NP_751897 Length = 835 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MYKRMYAAL 9 +YK +Y+AL Sbjct: 336 LYKTVYSAL 344>NP_001148 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 YKRMY 6 YKRMY Sbjct: 473 YKRMY 477>NP_665875 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 YKRMY 6 YKRMY Sbjct: 473 YKRMY 477>NP_001265336 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 YKRMY 6 YKRMY Sbjct: 473 YKRMY 477>NP_001265337 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 YKRMY 6 YKRMY Sbjct: 473 YKRMY 477>NP_001265338 Length = 472 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 YKRMY 6 YKRMY Sbjct: 440 YKRMY 444>NP_665876 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 YKRMY 6 YKRMY Sbjct: 473 YKRMY 477>XP_006717877 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 YKRMY 6 YKRMY Sbjct: 473 YKRMY 477>XP_006717876 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 YKRMY 6 YKRMY Sbjct: 473 YKRMY 477>XP_005269799 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 YKRMY 6 YKRMY Sbjct: 473 YKRMY 477>XP_005269798 Length = 605 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 YKRMY 6 YKRMY Sbjct: 573 YKRMY 577>NP_057475 Length = 178 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 MYKRMYAA 8 +YKR Y A Sbjct: 154 VYKRFYPA 161>NP_002059 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 MYKRMY 6 MY RMY Sbjct: 315 MYTRMY 320>NP_001171705 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 MYKRMY 6 +YKR+Y Sbjct: 822 LYKRLY 827>NP_001171702 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 MYKRMY 6 +YKR+Y Sbjct: 886 LYKRLY 891>NP_001171703 Length = 1013 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 MYKRMY 6 +YKR+Y Sbjct: 886 LYKRLY 891>NP_001171704 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 MYKRMY 6 +YKR+Y Sbjct: 886 LYKRLY 891>XP_005261497 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 MYKRMY 6 +YKR+Y Sbjct: 822 LYKRLY 827>XP_005261496 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 MYKRMY 6 +YKR+Y Sbjct: 886 LYKRLY 891>XP_006724258 Length = 1022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 MYKRMY 6 +YKR+Y Sbjct: 886 LYKRLY 891>NP_066938 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 MYKRMY 6 +YKR+Y Sbjct: 886 LYKRLY 891Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.136 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 405,290 Number of extensions: 564 Number of successful extensions: 41 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |