Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 20 390 NP_000170 20 390 NP_001268422 20 390 NP_001268423 20 390 XP_005264328 20 390 NP_060866 17 3301 NP_001274420 17 4312 XP_006712026 17 4312 XP_005264244 17 4312 NP_859076 17 4312 NP_065944 16 7355 NP_001229277 16 7355 NP_443179 16 7355 XP_005266703 16 7355 XP_006717931 16 7355 XP_006717930 16 7355 XP_005269915 16 7355 XP_005269914 16 7355 XP_006717929 16 7355 XP_006717928 16 7355 NP_001006940 16 7355 NP_997244 15 9605 NP_057526 15 9605 NP_001185470 15 9605 NP_001035548 15 9605 NP_001026 15 9605 NP_775759 15 9605 NP_001275933 15 9605 NP_001275931 15 9605 NP_116559 15 9605 NP_002898 15 9605 NP_006286 15 9605 NP_037462 15 9605 NP_932076 15 9605 XP_005275347 15 9605 XP_005275078 15 9605 XP_005272926 15 9605 XP_005274943 15 9605 XP_006719196 15 9605 XP_005253521 15 9605 XP_005253519 15 9605 XP_005253520 15 9605 XP_005253518 15 9605 XP_005249419 15 9605 XP_005272073 15 9605 XP_005272072 15 9605 XP_005271931 15 9605 XP_006711873 15 9605 XP_006711872 15 9605 XP_006711871 15 9605 XP_006711870 15 9605 XP_006711869 15 9605 XP_006711868 15 9605 XP_006711867 15 9605 XP_006711866 15 9605 XP_006711865 15 9605 XP_005245269 15 9605 XP_006711403 15 9605 NP_653300 15 9605>NP_001268421 Length = 1230 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MVVPDKISK 9 MVVPDKIS+ Sbjct: 669 MVVPDKISE 677>NP_000170 Length = 1360 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MVVPDKISK 9 MVVPDKIS+ Sbjct: 799 MVVPDKISE 807>NP_001268422 Length = 1058 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MVVPDKISK 9 MVVPDKIS+ Sbjct: 497 MVVPDKISE 505>NP_001268423 Length = 1058 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MVVPDKISK 9 MVVPDKIS+ Sbjct: 497 MVVPDKISE 505>XP_005264328 Length = 1261 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MVVPDKISK 9 MVVPDKIS+ Sbjct: 700 MVVPDKISE 708>NP_060866 Length = 378 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 VVPDK+ K Sbjct: 266 VVPDKMQK 273>NP_001274420 Length = 1795 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VVPDKIS 8 +VPDK+S Sbjct: 1467 IVPDKLS 1473>XP_006712026 Length = 937 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VVPDKIS 8 +VPDK+S Sbjct: 609 IVPDKLS 615>XP_005264244 Length = 1795 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VVPDKIS 8 +VPDK+S Sbjct: 1467 IVPDKLS 1473>NP_859076 Length = 378 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 +VPDK+ K Sbjct: 266 IVPDKMQK 273>NP_065944 Length = 1701 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VVPDKIS 8 +VP+KIS Sbjct: 160 IVPEKIS 166>NP_001229277 Length = 104 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VVPDKIS 8 +VPDK+S Sbjct: 44 LVPDKLS 50>NP_443179 Length = 2170 Score = 15.8 bits (29), Expect = 7355 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 MVVPDKI 7 +++PDK+ Sbjct: 1266 LIIPDKV 1272>XP_005266703 Length = 1501 Score = 15.8 bits (29), Expect = 7355 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 MVVPDKI 7 +++PDK+ Sbjct: 597 LIIPDKV 603>XP_006717931 Length = 255 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VPDKISK 9 +PD ISK Sbjct: 65 IPDSISK 71>XP_006717930 Length = 261 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VPDKISK 9 +PD ISK Sbjct: 65 IPDSISK 71>XP_005269915 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VPDKISK 9 +PD ISK Sbjct: 65 IPDSISK 71>XP_005269914 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VPDKISK 9 +PD ISK Sbjct: 65 IPDSISK 71>XP_006717929 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VPDKISK 9 +PD ISK Sbjct: 65 IPDSISK 71>XP_006717928 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VPDKISK 9 +PD ISK Sbjct: 65 IPDSISK 71>NP_001006940 Length = 261 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VPDKISK 9 +PD ISK Sbjct: 65 IPDSISK 71>NP_997244 Length = 3169 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MVVPDKISK 9 +V PD ISK Sbjct: 1419 IVFPDVISK 1427>NP_057526 Length = 948 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VPDKISK 9 VPDKI++ Sbjct: 272 VPDKINQ 278>NP_001185470 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VPDKISK 9 VPDKI++ Sbjct: 272 VPDKINQ 278>NP_001035548 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VPDKISK 9 VPDKI++ Sbjct: 272 VPDKINQ 278>NP_001026 Length = 4967 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>NP_775759 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VVPDKI 7 VVPDK+ Sbjct: 606 VVPDKL 611>NP_001275933 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VVPDKI 7 VVPDK+ Sbjct: 544 VVPDKL 549>NP_001275931 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VVPDKI 7 VVPDK+ Sbjct: 606 VVPDKL 611>NP_116559 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 V P+KI+K Sbjct: 189 VTPEKIAK 196>NP_002898 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 V P+KI+K Sbjct: 189 VTPEKIAK 196>NP_006286 Length = 1264 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VVPDKIS 8 V PDKIS Sbjct: 773 VSPDKIS 779>NP_037462 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MVVPDKISK 9 ++ PD ISK Sbjct: 97 LIKPDAISK 105>NP_932076 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MVVPDKISK 9 ++ PD ISK Sbjct: 61 LIKPDAISK 69>XP_005275347 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VVPDKIS 8 V PDKIS Sbjct: 774 VSPDKIS 780>XP_005275078 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VVPDKIS 8 V PDKIS Sbjct: 774 VSPDKIS 780>XP_005272926 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VVPDKIS 8 V PDKIS Sbjct: 774 VSPDKIS 780>XP_005274943 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VVPDKIS 8 V PDKIS Sbjct: 774 VSPDKIS 780>XP_006719196 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 V P+KI+K Sbjct: 189 VTPEKIAK 196>XP_005253521 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 V P+KI+K Sbjct: 189 VTPEKIAK 196>XP_005253519 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 V P+KI+K Sbjct: 189 VTPEKIAK 196>XP_005253520 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 V P+KI+K Sbjct: 189 VTPEKIAK 196>XP_005253518 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 V P+KI+K Sbjct: 189 VTPEKIAK 196>XP_005249419 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VVPDKIS 8 V PDKIS Sbjct: 774 VSPDKIS 780>XP_005272073 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VPDKISK 9 VPDKI++ Sbjct: 272 VPDKINQ 278>XP_005272072 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VPDKISK 9 VPDKI++ Sbjct: 272 VPDKINQ 278>XP_005271931 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VVPDKI 7 VVPDK+ Sbjct: 606 VVPDKL 611>XP_006711873 Length = 4954 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 +VPD++ K Sbjct: 1353 LVPDRVDK 1360>XP_006711872 Length = 2735 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>XP_006711871 Length = 4906 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>XP_006711870 Length = 4965 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>XP_006711869 Length = 4973 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>XP_006711868 Length = 4975 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>XP_006711867 Length = 4977 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>XP_006711866 Length = 4984 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 +VPD++ K Sbjct: 1353 LVPDRVDK 1360>XP_006711865 Length = 4985 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVPDKISK 9 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>XP_005245269 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VPDKISK 9 VPD +SK Sbjct: 108 VPDAVSK 114>XP_006711403 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VPDKISK 9 VPD +SK Sbjct: 537 VPDAVSK 543>NP_653300 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VPDKISK 9 VPD +SK Sbjct: 605 VPDAVSK 611Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.133 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 637,669 Number of extensions: 606 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |