Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 19 665 XP_006715292 19 665 NP_775771 19 869 NP_660204 19 869 XP_006720466 19 869 XP_005254230 19 869 XP_006720465 19 869 XP_005254228 19 869 NP_001020276 17 2528 NP_001258671 17 2528 NP_001258670 17 2528 NP_001883 17 2528 NP_001885 16 7355 NP_689407 16 7355 NP_001276841 16 7355 NP_001884 16 7355 NP_620693 16 7355 XP_005256394 16 7355 XP_005256393 16 7355 NP_001188358 15 9605 NP_036427 15 9605 NP_001186210 15 9605 XP_006724247 15 9605 XP_006724246 15 9605 XP_006724245 15 9605 XP_006724244 15 9605 XP_006724243 15 9605 XP_005261477 15 9605 XP_005261476 15 9605 XP_005261474 15 9605 XP_006724242 15 9605 XP_005261473 15 9605 XP_005261472 15 9605>NP_115927 Length = 1321 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VRYASVNA 9 VRYASVNA Sbjct: 203 VRYASVNA 210>XP_006715292 Length = 759 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VRYASVNA 9 VRYASVNA Sbjct: 190 VRYASVNA 197>NP_775771 Length = 1244 Score = 18.9 bits (37), Expect = 869 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VRYASVNA 9 VRYAS+NA Sbjct: 190 VRYASINA 197>NP_660204 Length = 337 Score = 18.9 bits (37), Expect = 869 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VRYASVNA 9 VRYAS+NA Sbjct: 185 VRYASINA 192>XP_006720466 Length = 1175 Score = 18.9 bits (37), Expect = 869 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VRYASVNA 9 VRYAS+NA Sbjct: 121 VRYASINA 128>XP_005254230 Length = 1175 Score = 18.9 bits (37), Expect = 869 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VRYASVNA 9 VRYAS+NA Sbjct: 121 VRYASINA 128>XP_006720465 Length = 1239 Score = 18.9 bits (37), Expect = 869 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VRYASVNA 9 VRYAS+NA Sbjct: 185 VRYASINA 192>XP_005254228 Length = 1250 Score = 18.9 bits (37), Expect = 869 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VRYASVNA 9 VRYAS+NA Sbjct: 196 VRYASINA 203>NP_001020276 Length = 365 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RYASVNA 9 RYAS+NA Sbjct: 214 RYASINA 220>NP_001258671 Length = 276 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RYASVNA 9 RYAS+NA Sbjct: 125 RYASINA 131>NP_001258670 Length = 325 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RYASVNA 9 RYAS+NA Sbjct: 186 RYASINA 192>NP_001883 Length = 337 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RYASVNA 9 RYAS+NA Sbjct: 186 RYASINA 192>NP_001885 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RYASVN 8 RYAS+N Sbjct: 178 RYASIN 183>NP_689407 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RYASVN 8 RYAS+N Sbjct: 178 RYASIN 183>NP_001276841 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RYASVN 8 RYAS+N Sbjct: 178 RYASIN 183>NP_001884 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RYASVN 8 RYAS+N Sbjct: 178 RYASIN 183>NP_620693 Length = 409 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RYASVN 8 RYAS+N Sbjct: 178 RYASIN 183>XP_005256394 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RYASVN 8 RYAS+N Sbjct: 178 RYASIN 183>XP_005256393 Length = 450 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RYASVN 8 RYAS+N Sbjct: 178 RYASIN 183>NP_001188358 Length = 2170 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVRYASVNA 9 M+R A++NA Sbjct: 1 MIRIAALNA 9>NP_036427 Length = 2220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVRYASVNA 9 M+R A++NA Sbjct: 1 MIRIAALNA 9>NP_001186210 Length = 2220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVRYASVNA 9 M+R A++NA Sbjct: 1 MIRIAALNA 9>XP_006724247 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVRYASVNA 9 M+R A++NA Sbjct: 1 MIRIAALNA 9>XP_006724246 Length = 2103 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVRYASVNA 9 M+R A++NA Sbjct: 1 MIRIAALNA 9>XP_006724245 Length = 2191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVRYASVNA 9 M+R A++NA Sbjct: 1 MIRIAALNA 9>XP_006724244 Length = 2191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVRYASVNA 9 M+R A++NA Sbjct: 1 MIRIAALNA 9>XP_006724243 Length = 2196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVRYASVNA 9 M+R A++NA Sbjct: 1 MIRIAALNA 9>XP_005261477 Length = 2200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVRYASVNA 9 M+R A++NA Sbjct: 1 MIRIAALNA 9>XP_005261476 Length = 2210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVRYASVNA 9 M+R A++NA Sbjct: 1 MIRIAALNA 9>XP_005261474 Length = 2225 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVRYASVNA 9 M+R A++NA Sbjct: 1 MIRIAALNA 9>XP_006724242 Length = 2226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVRYASVNA 9 M+R A++NA Sbjct: 1 MIRIAALNA 9>XP_005261473 Length = 2250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVRYASVNA 9 M+R A++NA Sbjct: 1 MIRIAALNA 9>XP_005261472 Length = 2255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MVRYASVNA 9 M+R A++NA Sbjct: 1 MIRIAALNA 9Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.121 0.314 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 329,534 Number of extensions: 390 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |