Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 17 2528 XP_006716142 17 2528 XP_005250088 17 2528 XP_006716141 17 2528 XP_005250085 17 2528 XP_006716140 17 2528 XP_005250084 17 2528 XP_005250083 17 2528 XP_005250082 17 2528 NP_001166203 17 3301 NP_068557 17 3301 NP_001166210 17 3301 NP_001166214 17 3301 XP_006724523 17 3301 XP_006724522 17 3301 NP_060224 16 5631 NP_055325 16 5631 NP_149015 16 5631 XP_006715989 16 5631 XP_005249256 16 5631 XP_006715189 16 5631 XP_006715188 16 5631 NP_001184033 16 7355 NP_005924 16 7355 NP_056123 16 7355 NP_115665 16 7355 NP_001035243 16 7355 NP_065897 16 7355 NP_001229797 16 7355 XP_006719828 16 7355 XP_006718903 16 7355 XP_006718902 16 7355 XP_005252890 16 7355 XP_006714864 16 7355 XP_005248178 16 7355 NP_055625 15 9605 NP_001157915 15 9605 XP_005256350 15 9605 XP_006711734 15 9605 XP_006711733 15 9605 XP_006711732 15 9605 XP_006711731 15 9605 XP_006711730 15 9605 XP_006711729 15 9605 XP_005245695 15 9605 NP_208382 15 9605>NP_733751 Length = 4911 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 MV SEISSS Sbjct: 3436 MVGSEISSS 3444>XP_006716142 Length = 4927 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 MV SEISSS Sbjct: 3453 MVGSEISSS 3461>XP_005250088 Length = 4928 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 MV SEISSS Sbjct: 3453 MVGSEISSS 3461>XP_006716141 Length = 4959 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 MV SEISSS Sbjct: 3453 MVGSEISSS 3461>XP_005250085 Length = 4979 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 MV SEISSS Sbjct: 3453 MVGSEISSS 3461>XP_006716140 Length = 4982 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 MV SEISSS Sbjct: 3453 MVGSEISSS 3461>XP_005250084 Length = 4982 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 MV SEISSS Sbjct: 3453 MVGSEISSS 3461>XP_005250083 Length = 4982 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 MV SEISSS Sbjct: 3452 MVGSEISSS 3460>XP_005250082 Length = 4983 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 MV SEISSS Sbjct: 3453 MVGSEISSS 3461>NP_001166203 Length = 480 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 M+DS ISSS Sbjct: 347 MMDSHISSS 355>NP_068557 Length = 530 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 M+DS ISSS Sbjct: 397 MMDSHISSS 405>NP_001166210 Length = 530 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 M+DS ISSS Sbjct: 397 MMDSHISSS 405>NP_001166214 Length = 530 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 M+DS ISSS Sbjct: 397 MMDSHISSS 405>XP_006724523 Length = 530 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 M+DS ISSS Sbjct: 397 MMDSHISSS 405>XP_006724522 Length = 530 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 M+DS ISSS Sbjct: 397 MMDSHISSS 405>NP_060224 Length = 1440 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 +VDSE+S S Sbjct: 903 LVDSELSPS 911>NP_055325 Length = 4935 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 M DSE+SS+ Sbjct: 3834 MSDSEVSST 3842>NP_149015 Length = 5142 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 M DSE+SS+ Sbjct: 3834 MSDSEVSST 3842>XP_006715989 Length = 5148 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 M DSE+SS+ Sbjct: 3834 MSDSEVSST 3842>XP_005249256 Length = 1054 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 +VDSE+S S Sbjct: 517 LVDSELSPS 525>XP_006715189 Length = 1240 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 +VDSE+S S Sbjct: 903 LVDSELSPS 911>XP_006715188 Length = 1400 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MVDSEISSS 9 +VDSE+S S Sbjct: 903 LVDSELSPS 911>NP_001184033 Length = 3972 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VDSEISSS 9 VDS +SSS Sbjct: 2910 VDSSVSSS 2917>NP_005924 Length = 3969 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VDSEISSS 9 VDS +SSS Sbjct: 2907 VDSSVSSS 2914>NP_056123 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VDSEISSS 9 VDS ISSS Sbjct: 776 VDSTISSS 783>NP_115665 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSEISSS 9 DSE+SSS Sbjct: 286 DSELSSS 292>NP_001035243 Length = 426 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VDSEISSS 9 +DSE+S+S Sbjct: 106 IDSELSTS 113>NP_065897 Length = 581 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VDSEISSS 9 +DSE+S+S Sbjct: 252 IDSELSAS 259>NP_001229797 Length = 590 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VDSEISSS 9 +DSE+S+S Sbjct: 270 IDSELSTS 277>XP_006719828 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VDSEISSS 9 +DSE+S+S Sbjct: 320 IDSELSTS 327>XP_006718903 Length = 2673 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VDSEISSS 9 VDS +SSS Sbjct: 1611 VDSSVSSS 1618>XP_006718902 Length = 2964 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VDSEISSS 9 VDS +SSS Sbjct: 1902 VDSSVSSS 1909>XP_005252890 Length = 1019 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VDSEISSS 9 VDS ISSS Sbjct: 778 VDSTISSS 785>XP_006714864 Length = 772 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSEISSS 9 DSE+SSS Sbjct: 286 DSELSSS 292>XP_005248178 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VDSEISSS 9 +DSE+S+S Sbjct: 252 IDSELSAS 259>NP_055625 Length = 3117 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VDSEISS 8 VDS+ISS Sbjct: 2657 VDSQISS 2663>NP_001157915 Length = 1873 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSEISSS 9 DS+ISSS Sbjct: 1667 DSQISSS 1673>XP_005256350 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VDSEISSS 9 V SE+SSS Sbjct: 578 VSSEVSSS 585>XP_006711734 Length = 3136 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VDSEISS 8 VDS+ISS Sbjct: 2676 VDSQISS 2682>XP_006711733 Length = 3137 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VDSEISS 8 VDS+ISS Sbjct: 2677 VDSQISS 2683>XP_006711732 Length = 3154 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VDSEISS 8 VDS+ISS Sbjct: 2694 VDSQISS 2700>XP_006711731 Length = 3157 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VDSEISS 8 VDS+ISS Sbjct: 2697 VDSQISS 2703>XP_006711730 Length = 3157 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VDSEISS 8 VDS+ISS Sbjct: 2697 VDSQISS 2703>XP_006711729 Length = 3158 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VDSEISS 8 VDS+ISS Sbjct: 2698 VDSQISS 2704>XP_005245695 Length = 3158 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VDSEISS 8 VDS+ISS Sbjct: 2698 VDSQISS 2704>NP_208382 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 MVDSEI 6 MVDSEI Sbjct: 398 MVDSEI 403Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.288 0.102 0.215 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 479,687 Number of extensions: 954 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |