Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055832 18 1135 NP_963920 18 1135 NP_963918 18 1135 NP_002430 18 1135 XP_005270706 18 1135 XP_005270705 18 1135 NP_001008563 17 3301 NP_006667 17 3301 NP_001103773 17 3301 XP_006717001 17 3301 XP_005251722 17 3301 NP_001186637 17 4312 NP_001186636 17 4312 NP_001186635 17 4312 NP_001093895 17 4312 XP_006715742 17 4312 XP_006715741 17 4312 XP_005249747 17 4312 XP_005249746 17 4312 XP_005249745 17 4312 NP_056129 17 4312 NP_055860 16 5631 NP_620140 16 5631 XP_006717792 16 5631 XP_006717791 16 5631 XP_006717790 16 5631 XP_006717789 16 5631 XP_006718900 16 7355 NP_783200 15 9605 NP_001193884 15 9605 NP_060139 15 9605 NP_783302 15 9605 NP_001193885 15 9605 NP_056049 15 9605 NP_001091988 15 9605 NP_003939 15 9605 NP_065923 15 9605 XP_005248952 15 9605 XP_005248951 15 9605 XP_005248950 15 9605 XP_005248949 15 9605 XP_006714470 15 9605 XP_006714469 15 9605 XP_005263392 15 9605 XP_005264816 15 9605 XP_005264815 15 9605 XP_005264814 15 9605 XP_006713067 15 9605 XP_006713066 15 9605>NP_055832 Length = 942 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 MTINVTTLR 9 +T+N+TTLR Sbjct: 103 LTVNLTTLR 111>NP_963920 Length = 828 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 MTINVTTLR 9 +T+N+TTLR Sbjct: 103 LTVNLTTLR 111>NP_963918 Length = 911 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 MTINVTTLR 9 +T+N+TTLR Sbjct: 72 LTVNLTTLR 80>NP_002430 Length = 1137 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 MTIN TTLR Sbjct: 535 MTINGTTLR 543>XP_005270706 Length = 851 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 MTINVTTLR 9 +T+N+TTLR Sbjct: 103 LTVNLTTLR 111>XP_005270705 Length = 934 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 MTINVTTLR 9 +T+N+TTLR Sbjct: 103 LTVNLTTLR 111>NP_001008563 Length = 914 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 +T+N+TT R Sbjct: 72 LTVNLTTFR 80>NP_006667 Length = 914 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 +T+N+TT R Sbjct: 72 LTVNLTTFR 80>NP_001103773 Length = 914 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 +T+N+TT R Sbjct: 72 LTVNLTTFR 80>XP_006717001 Length = 914 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 +T+N+TT R Sbjct: 72 LTVNLTTFR 80>XP_005251722 Length = 914 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 +T+N+TT R Sbjct: 72 LTVNLTTFR 80>NP_001186637 Length = 417 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 +TINV+T R Sbjct: 210 LTINVSTAR 218>NP_001186636 Length = 507 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 +TINV+T R Sbjct: 300 LTINVSTAR 308>NP_001186635 Length = 517 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 +TINV+T R Sbjct: 310 LTINVSTAR 318>NP_001093895 Length = 520 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 +TINV+T R Sbjct: 313 LTINVSTAR 321>XP_006715742 Length = 275 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 +TINV+T R Sbjct: 68 LTINVSTAR 76>XP_006715741 Length = 275 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 +TINV+T R Sbjct: 68 LTINVSTAR 76>XP_005249747 Length = 275 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 +TINV+T R Sbjct: 68 LTINVSTAR 76>XP_005249746 Length = 555 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 +TINV+T R Sbjct: 348 LTINVSTAR 356>XP_005249745 Length = 568 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 +TINV+T R Sbjct: 361 LTINVSTAR 369>NP_056129 Length = 469 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTINVTTLR 9 +TINV+T R Sbjct: 262 LTINVSTAR 270>NP_055860 Length = 1190 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 INVTTLR 9 INVTT+R Sbjct: 1138 INVTTVR 1144>NP_620140 Length = 330 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 INVTTLR 9 INVTTL+ Sbjct: 45 INVTTLK 51>XP_006717792 Length = 1184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 INVTTLR 9 INVTT+R Sbjct: 1132 INVTTVR 1138>XP_006717791 Length = 1210 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 INVTTLR 9 INVTT+R Sbjct: 1158 INVTTVR 1164>XP_006717790 Length = 1255 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 INVTTLR 9 INVTT+R Sbjct: 1203 INVTTVR 1209>XP_006717789 Length = 1261 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 INVTTLR 9 INVTT+R Sbjct: 1209 INVTTVR 1215>XP_006718900 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TINVTTL 8 T+N+TTL Sbjct: 543 TVNLTTL 549>NP_783200 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TINVTT 7 T+NVTT Sbjct: 891 TVNVTT 896>NP_001193884 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TINVTT 7 T+NVTT Sbjct: 891 TVNVTT 896>NP_060139 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 INVTTLR 9 +NVTTL+ Sbjct: 794 VNVTTLQ 800>NP_783302 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TINVTT 7 T+NVTT Sbjct: 563 TVNVTT 568>NP_001193885 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TINVTT 7 T+NVTT Sbjct: 562 TVNVTT 567>NP_056049 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MTINVTTL 8 ++INVTT+ Sbjct: 103 LSINVTTV 110>NP_001091988 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MTINVTTL 8 ++INVTT+ Sbjct: 103 LSINVTTV 110>NP_003939 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 INVTTL 8 INVTTL Sbjct: 467 INVTTL 472>NP_065923 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TINVTT 7 T+NVTT Sbjct: 893 TVNVTT 898>XP_005248952 Length = 1380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MTINVTTL 8 ++INVTT+ Sbjct: 103 LSINVTTV 110>XP_005248951 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MTINVTTL 8 ++INVTT+ Sbjct: 103 LSINVTTV 110>XP_005248950 Length = 1386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MTINVTTL 8 ++INVTT+ Sbjct: 103 LSINVTTV 110>XP_005248949 Length = 1386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MTINVTTL 8 ++INVTT+ Sbjct: 103 LSINVTTV 110>XP_006714470 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 INVTTL 8 INVTTL Sbjct: 467 INVTTL 472>XP_006714469 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 INVTTL 8 INVTTL Sbjct: 467 INVTTL 472>XP_005263392 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 INVTTL 8 INVTTL Sbjct: 467 INVTTL 472>XP_005264816 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TINVTT 7 T+NVTT Sbjct: 512 TVNVTT 517>XP_005264815 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TINVTT 7 T+NVTT Sbjct: 788 TVNVTT 793>XP_005264814 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TINVTT 7 T+NVTT Sbjct: 893 TVNVTT 898>XP_006713067 Length = 1025 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TINVTT 7 T+NVTT Sbjct: 890 TVNVTT 895>XP_006713066 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TINVTT 7 T+NVTT Sbjct: 897 TVNVTT 902Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.129 0.329 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 259,257 Number of extensions: 263 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |