Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_789765 20 390 NP_001123914 20 390 NP_005334 20 390 NP_004976 20 390 NP_203524 20 390 NP_002515 20 390 XP_006725199 20 390 XP_006719132 20 390 XP_006718280 20 390 NP_006266 17 2528 NP_001983 17 2528 NP_005617 17 2528 NP_001136408 17 3301 NP_631918 17 3301 NP_001238851 17 4312 NP_001238847 17 4312 NP_001238846 17 4312 NP_056461 17 4312 NP_001238850 17 4312 NP_001010942 17 4312 XP_006710866 17 4312 NP_001010935 17 4312 NP_002875 17 4312 NP_060109 16 5631 NP_036382 16 7355 NP_055621 15 9605 NP_001129471 15 9605 NP_056098 15 9605 NP_076407 15 9605>NP_789765 Length = 170 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MTEYRLVVV 9 MTEY+LVVV Sbjct: 1 MTEYKLVVV 9>NP_001123914 Length = 189 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MTEYRLVVV 9 MTEY+LVVV Sbjct: 1 MTEYKLVVV 9>NP_005334 Length = 189 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MTEYRLVVV 9 MTEY+LVVV Sbjct: 1 MTEYKLVVV 9>NP_004976 Length = 188 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MTEYRLVVV 9 MTEY+LVVV Sbjct: 1 MTEYKLVVV 9>NP_203524 Length = 189 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MTEYRLVVV 9 MTEY+LVVV Sbjct: 1 MTEYKLVVV 9>NP_002515 Length = 189 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MTEYRLVVV 9 MTEY+LVVV Sbjct: 1 MTEYKLVVV 9>XP_006725199 Length = 170 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MTEYRLVVV 9 MTEY+LVVV Sbjct: 1 MTEYKLVVV 9>XP_006719132 Length = 189 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MTEYRLVVV 9 MTEY+LVVV Sbjct: 1 MTEYKLVVV 9>XP_006718280 Length = 170 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MTEYRLVVV 9 MTEY+LVVV Sbjct: 1 MTEYKLVVV 9>NP_006266 Length = 344 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TEYRLVV 8 TEYRL+V Sbjct: 108 TEYRLIV 114>NP_001983 Length = 425 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTEYRLVVV 9 +TEYRLV + Sbjct: 66 LTEYRLVSI 74>NP_005617 Length = 494 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TEYRLVV 8 TEYRL+V Sbjct: 102 TEYRLIV 108>NP_001136408 Length = 543 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EYRLVVV 9 EYRLV+V Sbjct: 305 EYRLVIV 311>NP_631918 Length = 672 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EYRLVVV 9 EYRLV+V Sbjct: 434 EYRLVIV 440>NP_001238851 Length = 137 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTEYRLVVV 9 M EY+LVV+ Sbjct: 1 MREYKLVVL 9>NP_001238847 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTEYRLVVV 9 M EY+LVV+ Sbjct: 1 MREYKLVVL 9>NP_001238846 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTEYRLVVV 9 M EY+LVV+ Sbjct: 1 MREYKLVVL 9>NP_056461 Length = 184 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTEYRLVVV 9 M EY+LVV+ Sbjct: 1 MREYKLVVL 9>NP_001238850 Length = 165 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTEYRLVVV 9 M EY+LVV+ Sbjct: 1 MREYKLVVL 9>NP_001010942 Length = 184 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTEYRLVVV 9 M EY+LVV+ Sbjct: 1 MREYKLVVL 9>XP_006710866 Length = 184 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTEYRLVVV 9 M EY+LVV+ Sbjct: 1 MREYKLVVL 9>NP_001010935 Length = 184 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTEYRLVVV 9 M EY+LVV+ Sbjct: 1 MREYKLVVL 9>NP_002875 Length = 184 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MTEYRLVVV 9 M EY+LVV+ Sbjct: 1 MREYKLVVL 9>NP_060109 Length = 2916 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MTEYRLVV 8 MTEY L++ Sbjct: 1958 MTEYELLI 1965>NP_036382 Length = 204 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EYRLVVV 9 +YRLVVV Sbjct: 14 KYRLVVV 20>NP_055621 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MTEYRL 6 +TEYRL Sbjct: 843 LTEYRL 848>NP_001129471 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MTEYRL 6 +TEYRL Sbjct: 843 LTEYRL 848>NP_056098 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MTEYRLVV 8 +TEY LV+ Sbjct: 92 LTEYPLVI 99>NP_076407 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MTEYRLVV 8 MT+Y+L V Sbjct: 260 MTKYKLAV 267Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.143 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 425,286 Number of extensions: 488 Number of successful extensions: 29 Number of sequences better than 10000.0: 29 Number of HSP's gapped: 29 Number of HSP's successfully gapped: 29 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |