Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 19 665 NP_036462 19 665 NP_001243397 19 665 XP_005269721 19 665 NP_000775 17 3301 XP_006724219 17 3301 XP_006724218 17 3301 XP_006724217 17 3301 NP_689726 17 3301 NP_115543 16 7355 XP_005255740 16 7355 XP_006721041 16 7355 XP_006721040 16 7355 XP_005255739 16 7355 NP_001140 15 9605 NP_001191332 15 9605 NP_001191333 15 9605 NP_066267 15 9605 NP_001139187 15 9605 XP_005269773 15 9605 XP_006717866 15 9605 XP_005269772 15 9605 XP_006717865 15 9605 XP_006717864 15 9605 XP_006717863 15 9605 XP_006717862 15 9605 XP_006717861 15 9605 XP_006717860 15 9605 XP_006717859 15 9605 XP_006717858 15 9605 XP_006717857 15 9605 XP_006717856 15 9605 XP_006717855 15 9605 XP_006717854 15 9605 XP_006717853 15 9605 XP_006717852 15 9605 XP_006717851 15 9605 XP_006717850 15 9605 XP_006717849 15 9605 XP_006717848 15 9605 XP_006717847 15 9605 XP_006717846 15 9605 XP_006717845 15 9605 XP_006716050 15 9605>NP_001243398 Length = 1781 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MSVNLMSAP 9 MSVNLM AP Sbjct: 1675 MSVNLMPAP 1683>NP_036462 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MSVNLMSAP 9 MSVNLM AP Sbjct: 1967 MSVNLMPAP 1975>NP_001243397 Length = 1890 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MSVNLMSAP 9 MSVNLM AP Sbjct: 1784 MSVNLMPAP 1792>XP_005269721 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MSVNLMSAP 9 MSVNLM AP Sbjct: 1967 MSVNLMPAP 1975>NP_000775 Length = 531 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 MSVNLMSAP 9 M VNL SAP Sbjct: 104 MHVNLASAP 112>XP_006724219 Length = 1157 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSVNLMSAP 9 M +NL+SAP Sbjct: 516 MCLNLLSAP 524>XP_006724218 Length = 1200 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSVNLMSAP 9 M +NL+SAP Sbjct: 594 MCLNLLSAP 602>XP_006724217 Length = 1235 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSVNLMSAP 9 M +NL+SAP Sbjct: 594 MCLNLLSAP 602>NP_689726 Length = 1274 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSVNLMSAP 9 M +NL+SAP Sbjct: 633 MCLNLLSAP 641>NP_115543 Length = 813 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SVNLMSA 8 SVN+MSA Sbjct: 300 SVNIMSA 306>XP_005255740 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SVNLMSA 8 SVN+MSA Sbjct: 310 SVNIMSA 316>XP_006721041 Length = 680 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SVNLMSA 8 SVN+MSA Sbjct: 167 SVNIMSA 173>XP_006721040 Length = 661 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SVNLMSA 8 SVN+MSA Sbjct: 148 SVNIMSA 154>XP_005255739 Length = 823 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SVNLMSA 8 SVN+MSA Sbjct: 310 SVNIMSA 316>NP_001140 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 106 NVNLVSSP 113>NP_001191332 Length = 1861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 966 NVNLVSSP 973>NP_001191333 Length = 1868 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 973 NVNLVSSP 980>NP_066267 Length = 4377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 972 NVNLVSSP 979>NP_001139187 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VNLMSAP 9 VNL++AP Sbjct: 416 VNLLTAP 422>XP_005269773 Length = 1867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 972 NVNLVSSP 979>XP_006717866 Length = 1877 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 990 NVNLVSSP 997>XP_005269772 Length = 1885 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 990 NVNLVSSP 997>XP_006717865 Length = 1898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 994 NVNLVSSP 1001>XP_006717864 Length = 1924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 994 NVNLVSSP 1001>XP_006717863 Length = 1972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 994 NVNLVSSP 1001>XP_006717862 Length = 1981 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 994 NVNLVSSP 1001>XP_006717861 Length = 1984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 994 NVNLVSSP 1001>XP_006717860 Length = 1993 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 994 NVNLVSSP 1001>XP_006717859 Length = 2758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 994 NVNLVSSP 1001>XP_006717858 Length = 2775 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 994 NVNLVSSP 1001>XP_006717857 Length = 2794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 994 NVNLVSSP 1001>XP_006717856 Length = 2833 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 994 NVNLVSSP 1001>XP_006717855 Length = 2837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 994 NVNLVSSP 1001>XP_006717854 Length = 2852 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 994 NVNLVSSP 1001>XP_006717853 Length = 2854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 994 NVNLVSSP 1001>XP_006717852 Length = 3508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 101 NVNLVSSP 108>XP_006717851 Length = 3513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 106 NVNLVSSP 113>XP_006717850 Length = 4364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 957 NVNLVSSP 964>XP_006717849 Length = 4383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 976 NVNLVSSP 983>XP_006717848 Length = 4392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 985 NVNLVSSP 992>XP_006717847 Length = 4395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 988 NVNLVSSP 995>XP_006717846 Length = 4396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 989 NVNLVSSP 996>XP_006717845 Length = 4397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVNLMSAP 9 +VNL+S+P Sbjct: 990 NVNLVSSP 997>XP_006716050 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VNLMSAP 9 VNL++AP Sbjct: 416 VNLLTAP 422Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.115 0.299 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 374,498 Number of extensions: 430 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |