Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 665 NP_671714 19 665 XP_006715890 19 665 XP_005250160 19 665 XP_005250159 19 665 NP_694546 17 4312 NP_006494 17 4312 NP_001028774 17 4312 NP_817123 17 4312 NP_001127925 17 4312 NP_000706 16 5631 XP_005273308 16 5631 XP_005273309 16 5631 NP_001268669 16 7355 NP_001257449 16 7355 NP_055807 16 7355 NP_079411 16 7355 NP_001268668 16 7355 NP_056996 16 7355 XP_006722614 16 7355 XP_005258412 16 7355 XP_005258411 16 7355 XP_005258409 16 7355 XP_005258408 16 7355 XP_005258407 16 7355 XP_005258406 16 7355 XP_005258405 16 7355 XP_005258404 16 7355 XP_005258403 16 7355 XP_005267488 16 7355 XP_005267487 16 7355 XP_005250985 16 7355 XP_006716634 16 7355 NP_061735 16 7355 NP_114382 16 7355 NP_078858 15 9605 NP_001278232 15 9605 NP_001278214 15 9605 NP_001177779 15 9605 NP_001177776 15 9605 NP_037448 15 9605 NP_001177778 15 9605 NP_057300 15 9605 NP_066976 15 9605 NP_001257957 15 9605 NP_001136197 15 9605 XP_006722504 15 9605 XP_006722503 15 9605>NP_005742 Length = 3907 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 MSSTLDRE 8 MSSTLDRE Sbjct: 3312 MSSTLDRE 3319>NP_671714 Length = 3899 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 MSSTLDRE 8 MSSTLDRE Sbjct: 3304 MSSTLDRE 3311>XP_006715890 Length = 3860 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 MSSTLDRE 8 MSSTLDRE Sbjct: 3265 MSSTLDRE 3272>XP_005250160 Length = 3939 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 MSSTLDRE 8 MSSTLDRE Sbjct: 3344 MSSTLDRE 3351>XP_005250159 Length = 3952 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 MSSTLDRE 8 MSSTLDRE Sbjct: 3357 MSSTLDRE 3364>NP_694546 Length = 387 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STLDREL 9 ST+DREL Sbjct: 86 STIDREL 92>NP_006494 Length = 418 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STLDREL 9 ST+DREL Sbjct: 117 STIDREL 123>NP_001028774 Length = 1379 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSSTLDREL 9 +SST+ REL Sbjct: 110 LSSTIQREL 118>NP_817123 Length = 1040 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 MSSTLDRE 8 MSS LDRE Sbjct: 221 MSSFLDRE 228>NP_001127925 Length = 1059 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 MSSTLDRE 8 MSS LDRE Sbjct: 221 MSSFLDRE 228>NP_000706 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STLDREL 9 STLD+EL Sbjct: 591 STLDKEL 597>XP_005273308 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STLDREL 9 STLD+EL Sbjct: 591 STLDKEL 597>XP_005273309 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STLDREL 9 STLD+EL Sbjct: 591 STLDKEL 597>NP_001268669 Length = 1622 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 SSTL+RE Sbjct: 826 SSTLERE 832>NP_001257449 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSTLDREL 9 +STLDR L Sbjct: 325 NSTLDRHL 332>NP_055807 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSTLDREL 9 +STLDR L Sbjct: 325 NSTLDRHL 332>NP_079411 Length = 1439 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 SSTL+RE Sbjct: 651 SSTLERE 657>NP_001268668 Length = 1422 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 SSTL+RE Sbjct: 634 SSTLERE 640>NP_056996 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSTLDREL 9 SSTLD E+ Sbjct: 1081 SSTLDEEV 1088>XP_006722614 Length = 1589 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 SSTL+RE Sbjct: 801 SSTLERE 807>XP_005258412 Length = 1401 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 SSTL+RE Sbjct: 613 SSTLERE 619>XP_005258411 Length = 1409 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 SSTL+RE Sbjct: 613 SSTLERE 619>XP_005258409 Length = 1430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 SSTL+RE Sbjct: 634 SSTLERE 640>XP_005258408 Length = 1447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 SSTL+RE Sbjct: 651 SSTLERE 657>XP_005258407 Length = 1533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 SSTL+RE Sbjct: 826 SSTLERE 832>XP_005258406 Length = 1559 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 SSTL+RE Sbjct: 763 SSTLERE 769>XP_005258405 Length = 1597 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 SSTL+RE Sbjct: 801 SSTLERE 807>XP_005258404 Length = 1605 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 SSTL+RE Sbjct: 809 SSTLERE 815>XP_005258403 Length = 1614 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 SSTL+RE Sbjct: 826 SSTLERE 832>XP_005267488 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSTLDREL 9 +STLDR L Sbjct: 325 NSTLDRHL 332>XP_005267487 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSTLDREL 9 +STLDR L Sbjct: 325 NSTLDRHL 332>XP_005250985 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSTLDREL 9 SSTLD E+ Sbjct: 1081 SSTLDEEV 1088>XP_006716634 Length = 1420 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSTLDREL 9 SSTLD E+ Sbjct: 1095 SSTLDEEV 1102>NP_061735 Length = 931 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLDREL 9 TLDREL Sbjct: 409 TLDREL 414>NP_114382 Length = 823 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLDREL 9 TLDREL Sbjct: 409 TLDREL 414>NP_078858 Length = 4981 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 +ST+DRE Sbjct: 93 TSTIDRE 99>NP_001278232 Length = 4983 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 +ST+DRE Sbjct: 93 TSTIDRE 99>NP_001278214 Length = 4982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SSTLDRE 8 +ST+DRE Sbjct: 93 TSTIDRE 99>NP_001177779 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSTLDR 7 SSTLDR Sbjct: 707 SSTLDR 712>NP_001177776 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSTLDR 7 SSTLDR Sbjct: 636 SSTLDR 641>NP_037448 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSTLDR 7 SSTLDR Sbjct: 633 SSTLDR 638>NP_001177778 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSTLDR 7 SSTLDR Sbjct: 704 SSTLDR 709>NP_057300 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MSSTLDRE 8 + ST+DRE Sbjct: 483 VDSTIDRE 490>NP_066976 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSTLDREL 9 S++LDRE+ Sbjct: 425 SNSLDREI 432>NP_001257957 Length = 490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSTLDREL 9 S++LDRE+ Sbjct: 425 SNSLDREI 432>NP_001136197 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 MSSTLD 6 MSSTLD Sbjct: 395 MSSTLD 400>XP_006722504 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSTLDREL 9 S++LDRE+ Sbjct: 425 SNSLDREI 432>XP_006722503 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSTLDREL 9 S++LDRE+ Sbjct: 425 SNSLDREI 432Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.120 0.283 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 433,336 Number of extensions: 376 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |