Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 20 509 NP_000170 20 509 NP_001268422 20 509 NP_001268423 20 509 XP_005264328 20 509 NP_001130005 17 3301 NP_001191448 17 4312 NP_002552 17 4312 NP_001273428 16 5631 NP_001273425 16 5631 NP_079325 16 5631 NP_001273426 16 5631 NP_055873 16 7355 NP_055211 16 7355 XP_006719854 16 7355 XP_006719853 16 7355 NP_542198 16 7355 NP_057313 15 9605 NP_653271 15 9605 NP_001269353 15 9605 NP_694997 15 9605 NP_005437 15 9605 NP_004425 15 9605 NP_001008707 15 9605 NP_001153026 15 9605 XP_006724432 15 9605 XP_005261876 15 9605 XP_006720137 15 9605 XP_005267457 15 9605 XP_005267456 15 9605 XP_005267455 15 9605 XP_005267454 15 9605 XP_005273935 15 9605 XP_005273934 15 9605 XP_005273933 15 9605 XP_006718554 15 9605 XP_006718553 15 9605 XP_006718552 15 9605 XP_005253033 15 9605 XP_006718315 15 9605 XP_005253032 15 9605 XP_006718314 15 9605 XP_005253031 15 9605 XP_006718313 15 9605 XP_005253030 15 9605 XP_006717969 15 9605 XP_006717968 15 9605 XP_006717967 15 9605 XP_006717966 15 9605 XP_006717965 15 9605>NP_001268421 Length = 1230 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MSGESIFFV 9 MSGES FFV Sbjct: 1054 MSGESTFFV 1062>NP_000170 Length = 1360 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MSGESIFFV 9 MSGES FFV Sbjct: 1184 MSGESTFFV 1192>NP_001268422 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MSGESIFFV 9 MSGES FFV Sbjct: 882 MSGESTFFV 890>NP_001268423 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MSGESIFFV 9 MSGES FFV Sbjct: 882 MSGESTFFV 890>XP_005264328 Length = 1261 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MSGESIFFV 9 MSGES FFV Sbjct: 1085 MSGESTFFV 1093>NP_001130005 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 MSGESIF 7 MSGES+F Sbjct: 95 MSGESLF 101>NP_001191448 Length = 421 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GESIFFV 9 GE++FFV Sbjct: 97 GENVFFV 103>NP_002552 Length = 422 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GESIFFV 9 GE++FFV Sbjct: 97 GENVFFV 103>NP_001273428 Length = 588 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MSGESIFF 8 + G+SIFF Sbjct: 166 LKGQSIFF 173>NP_001273425 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MSGESIFF 8 + G+SIFF Sbjct: 219 LKGQSIFF 226>NP_079325 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MSGESIFF 8 + G+SIFF Sbjct: 219 LKGQSIFF 226>NP_001273426 Length = 707 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MSGESIFF 8 + G+SIFF Sbjct: 219 LKGQSIFF 226>NP_055873 Length = 1905 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSGESIFFV 9 M+G+S FFV Sbjct: 1143 MTGKSGFFV 1151>NP_055211 Length = 854 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 GESIFFV 9 GES+F++ Sbjct: 342 GESLFYI 348>XP_006719854 Length = 1550 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSGESIFFV 9 M+G+S FFV Sbjct: 788 MTGKSGFFV 796>XP_006719853 Length = 1809 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MSGESIFFV 9 M+G+S FFV Sbjct: 1047 MTGKSGFFV 1055>NP_542198 Length = 829 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 GESIFFV 9 GES+F++ Sbjct: 317 GESLFYI 323>NP_057313 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GESIFF 8 GE+IFF Sbjct: 112 GETIFF 117>NP_653271 Length = 1454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MSGESIFF 8 +SGESI++ Sbjct: 1166 ISGESIYW 1173>NP_001269353 Length = 963 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MSGESIFF 8 +SGESI++ Sbjct: 675 ISGESIYW 682>NP_694997 Length = 896 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SGESIFFV 9 SGE ++F+ Sbjct: 270 SGEVVYFI 277>NP_005437 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 GESIFFV 9 GE++FF+ Sbjct: 106 GENVFFL 112>NP_004425 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 SGESIFFV 9 +GE+++F+ Sbjct: 243 TGETVYFI 250>NP_001008707 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 SGESIFFV 9 +GE+++F+ Sbjct: 262 TGETVYFI 269>NP_001153026 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 GESIFFV 9 GE++FF+ Sbjct: 80 GENVFFL 86>XP_006724432 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 GESIFFV 9 GE++FF+ Sbjct: 80 GENVFFL 86>XP_005261876 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 GESIFFV 9 GE++FF+ Sbjct: 106 GENVFFL 112>XP_006720137 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 SGESIFFV 9 +GE+++F+ Sbjct: 262 TGETVYFI 269>XP_005267457 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 SGESIFFV 9 +GE+++F+ Sbjct: 230 TGETVYFI 237>XP_005267456 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 SGESIFFV 9 +GE+++F+ Sbjct: 243 TGETVYFI 250>XP_005267455 Length = 821 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 SGESIFFV 9 +GE+++F+ Sbjct: 249 TGETVYFI 256>XP_005267454 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 SGESIFFV 9 +GE+++F+ Sbjct: 262 TGETVYFI 269>XP_005273935 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SGESIFFV 9 SGE ++F+ Sbjct: 271 SGEVVYFI 278>XP_005273934 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SGESIFFV 9 SGE ++F+ Sbjct: 270 SGEVVYFI 277>XP_005273933 Length = 918 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SGESIFFV 9 SGE ++F+ Sbjct: 271 SGEVVYFI 278>XP_006718554 Length = 946 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SGESIFFV 9 SGE ++F+ Sbjct: 320 SGEVVYFI 327>XP_006718553 Length = 947 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SGESIFFV 9 SGE ++F+ Sbjct: 321 SGEVVYFI 328>XP_006718552 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SGESIFFV 9 SGE ++F+ Sbjct: 321 SGEVVYFI 328>XP_005253033 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GESIFF 8 GE+IFF Sbjct: 172 GETIFF 177>XP_006718315 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GESIFF 8 GE+IFF Sbjct: 112 GETIFF 117>XP_005253032 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GESIFF 8 GE+IFF Sbjct: 112 GETIFF 117>XP_006718314 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GESIFF 8 GE+IFF Sbjct: 112 GETIFF 117>XP_005253031 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GESIFF 8 GE+IFF Sbjct: 112 GETIFF 117>XP_006718313 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GESIFF 8 GE+IFF Sbjct: 112 GETIFF 117>XP_005253030 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GESIFF 8 GE+IFF Sbjct: 172 GETIFF 177>XP_006717969 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SGESIFF 8 SGE +FF Sbjct: 37 SGEPLFF 43>XP_006717968 Length = 952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SGESIFF 8 SGE +FF Sbjct: 550 SGEPLFF 556>XP_006717967 Length = 952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SGESIFF 8 SGE +FF Sbjct: 550 SGEPLFF 556>XP_006717966 Length = 952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SGESIFF 8 SGE +FF Sbjct: 550 SGEPLFF 556>XP_006717965 Length = 958 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SGESIFF 8 SGE +FF Sbjct: 556 SGEPLFF 562Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.145 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 573,395 Number of extensions: 704 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |