Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 21 175 NP_001075109 21 175 XP_006719601 17 4312 NP_056415 16 5631 NP_001035937 16 5631 NP_008982 16 7355 NP_003244 16 7355 NP_001273762" target = "next">NP_001273762 16 7355 NP_078881 16 7355 NP_005246 16 7355 XP_005261097 16 7355 XP_005261096 16 7355 XP_005261095 16 7355 XP_005261094 16 7355 XP_005263274 16 7355 XP_005263272 16 7355 XP_005263271 16 7355 XP_005272330 16 7355 XP_005272329 16 7355 XP_005272327 16 7355 XP_006713937 16 7355 XP_005272326 16 7355 XP_005272325 16 7355 NP_112224 15 9605 NP_060626 15 9605 NP_056193 15 9605 NP_001074324 15 9605 NP_001004339 15 9605 NP_663782 15 9605 NP_006043 15 9605 NP_001118 15 9605 NP_919272 15 9605 XP_005260968 15 9605 XP_005260966 15 9605 XP_005257995 15 9605 XP_005257994 15 9605 XP_005253972 15 9605 XP_005253971 15 9605 XP_006719602 15 9605 XP_005253212 15 9605 XP_005253211 15 9605 XP_006710709 15 9605 NP_001159491 15 9605 NP_001273 15 9605 NP_001025177 15 9605>NP_008835 Length = 4128 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MSDFKVEFM 9 MSDFKVEF+ Sbjct: 3687 MSDFKVEFL 3695>NP_001075109 Length = 4097 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MSDFKVEFM 9 MSDFKVEF+ Sbjct: 3687 MSDFKVEFL 3695>XP_006719601 Length = 748 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MSDFKVEF 8 +SDFKV F Sbjct: 279 LSDFKVVF 286>NP_056415 Length = 404 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DFKVEFM 9 DFKV+F+ Sbjct: 356 DFKVQFV 362>NP_001035937 Length = 398 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DFKVEFM 9 DFKV+F+ Sbjct: 356 DFKVQFV 362>NP_008982 Length = 650 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MSDFKVEF 8 M DF+VE+ Sbjct: 100 MLDFRVEY 107>NP_003244 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MSDFKVEFM 9 M +F+VEF+ Sbjct: 1091 MVEFQVEFL 1099>NP_001273762" target = "next">NP_001273762 Length = 1213 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MSDFKVE 7 M DFK+E Sbjct: 520 MRDFKIE 526>NP_078881 Length = 786 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MSDFKVEFM 9 + DFK EF+ Sbjct: 64 LRDFKFEFI 72>NP_005246 Length = 1311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MSDFKVE 7 M DFK+E Sbjct: 618 MRDFKIE 624>XP_005261097 Length = 1452 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MSDFKVEFM 9 M +F+VEF+ Sbjct: 1091 MVEFQVEFL 1099>XP_005261096 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MSDFKVEFM 9 M +F+VEF+ Sbjct: 1091 MVEFQVEFL 1099>XP_005261095 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MSDFKVEFM 9 M +F+VEF+ Sbjct: 1091 MVEFQVEFL 1099>XP_005261094 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MSDFKVEFM 9 M +F+VEF+ Sbjct: 1091 MVEFQVEFL 1099>XP_005263274 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MSDFKVEFM 9 + DFK EF+ Sbjct: 64 LRDFKFEFI 72>XP_005263272 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MSDFKVEFM 9 + DFK EF+ Sbjct: 64 LRDFKFEFI 72>XP_005263271 Length = 762 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MSDFKVEFM 9 + DFK EF+ Sbjct: 64 LRDFKFEFI 72>XP_005272330 Length = 1140 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MSDFKVE 7 M DFK+E Sbjct: 618 MRDFKIE 624>XP_005272329 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MSDFKVE 7 M DFK+E Sbjct: 482 MRDFKIE 488>XP_005272327 Length = 1236 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MSDFKVE 7 M DFK+E Sbjct: 618 MRDFKIE 624>XP_006713937 Length = 1249 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MSDFKVE 7 M DFK+E Sbjct: 556 MRDFKIE 562>XP_005272326 Length = 1262 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MSDFKVE 7 M DFK+E Sbjct: 618 MRDFKIE 624>XP_005272325 Length = 1300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MSDFKVE 7 M DFK+E Sbjct: 618 MRDFKIE 624>NP_112224 Length = 1849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MSDFKVEF 8 + +FKVEF Sbjct: 1325 LRNFKVEF 1332>NP_060626 Length = 4363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DFKVEF 8 DF+VEF Sbjct: 1649 DFEVEF 1654>NP_056193 Length = 4388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DFKVEF 8 DF+VEF Sbjct: 1649 DFEVEF 1654>NP_001074324 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 MSDFKVE 7 +SDFK++ Sbjct: 273 LSDFKIQ 279>NP_001004339 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 MSDFKVEFM 9 + DF++ FM Sbjct: 739 LDDFRMHFM 747>NP_663782 Length = 939 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MSDFKVEF 8 M+DF ++F Sbjct: 752 MTDFAIQF 759>NP_006043 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SDFKVEF 8 ++FKVEF Sbjct: 266 TNFKVEF 272>NP_001118 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MSDFKVEF 8 M+DF ++F Sbjct: 759 MTDFAIQF 766>NP_919272 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 MSDFKVE 7 MSDF+++ Sbjct: 166 MSDFRIQ 172>XP_005260968 Length = 172 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SDFKVEF 8 ++FKVEF Sbjct: 141 TNFKVEF 147>XP_005260966 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SDFKVEF 8 ++FKVEF Sbjct: 239 TNFKVEF 245>XP_005257995 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MSDFKVEF 8 M+DF ++F Sbjct: 764 MTDFAIQF 771>XP_005257994 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MSDFKVEF 8 M+DF ++F Sbjct: 764 MTDFAIQF 771>XP_005253972 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 MSDFKVE 7 +SDFK++ Sbjct: 271 LSDFKIQ 277>XP_005253971 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 MSDFKVE 7 +SDFK++ Sbjct: 279 LSDFKIQ 285>XP_006719602 Length = 645 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 MSDFKVE 7 +SDFK++ Sbjct: 279 LSDFKIQ 285>XP_005253212 Length = 1838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MSDFKVEF 8 + +FKVEF Sbjct: 1314 LRNFKVEF 1321>XP_005253211 Length = 1881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MSDFKVEF 8 + +FKVEF Sbjct: 1357 LRNFKVEF 1364>XP_006710709 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 MSDFKVEFM 9 + DF++ FM Sbjct: 397 LDDFRMHFM 405>NP_001159491 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MSDFKVEF 8 M+DF ++F Sbjct: 732 MTDFAIQF 739>NP_001273 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MSDFKVEF 8 M+DF ++F Sbjct: 750 MTDFAIQF 757>NP_001025177 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MSDFKVEF 8 M+DF ++F Sbjct: 764 MTDFAIQF 771Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.140 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 486,366 Number of extensions: 804 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |