Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_005249968                                                           19     665
NP_001363                                                              17    4312
NP_001075                                                              17    4312
XP_006721530                                                           17    4312
XP_006721529                                                           17    4312
XP_006721528                                                           17    4312
NP_055180                                                              16    7355
NP_037453                                                              16    7355
NP_057116                                                              16    7355
NP_001008223                                                           16    7355
NP_001274448                                                           16    7355
NP_001274449                                                           16    7355
NP_068659                                                              16    7355
NP_068658                                                              16    7355
NP_004349                                                              16    7355
NP_001274447                                                           16    7355
NP_001274453                                                           16    7355
NP_001274445                                                           16    7355
NP_001274451                                                           16    7355
NP_001274446                                                           16    7355
NP_060814                                                              16    7355
NP_001135864                                                           16    7355
NP_001135863                                                           16    7355
NP_001130010                                                           16    7355
NP_689648                                                              16    7355
NP_062822                                                              16    7355
XP_005277970                                                           16    7355
XP_006724911                                                           16    7355
XP_006724910                                                           16    7355
XP_006717973                                                           16    7355
XP_006712555                                                           16    7355
XP_006712554                                                           16    7355
XP_005263717                                                           16    7355
XP_005263716                                                           16    7355
XP_006712553                                                           16    7355
NP_079523                                                              16    7355
NP_997246                                                              16    7355
NP_001026                                                              15    9605
NP_001001924                                                           15    9605
NP_001001925                                                           15    9605
NP_115811                                                              15    9605
NP_001002759                                                           15    9605
NP_001230925                                                           15    9605
NP_002410                                                              15    9605
NP_001027                                                              15    9605
NP_001271160                                                           15    9605
NP_001271161                                                           15    9605
NP_001275521                                                           15    9605
NP_001275520                                                           15    9605
NP_116184                                                              15    9605
NP_001035370                                                           15    9605
NP_079445                                                              15    9605
NP_001138299                                                           15    9605
NP_001137461                                                           15    9605
NP_001271159                                                           15    9605
NP_149132                                                              15    9605
NP_061121                                                              15    9605
NP_001275519                                                           15    9605
XP_006720213                                                           15    9605
XP_006720212                                                           15    9605
XP_005267740                                                           15    9605
XP_005269579                                                           15    9605
XP_005269578                                                           15    9605
XP_005273640                                                           15    9605
XP_005273639                                                           15    9605
XP_005273638                                                           15    9605
XP_005273637                                                           15    9605
XP_005273636                                                           15    9605
XP_005273635                                                           15    9605
XP_005273634                                                           15    9605
XP_005265380                                                           15    9605
XP_006711873                                                           15    9605
XP_006711871                                                           15    9605
XP_006711870                                                           15    9605
XP_006711869                                                           15    9605
XP_006711868                                                           15    9605
XP_006711867                                                           15    9605
XP_006711866                                                           15    9605
XP_006711865                                                           15    9605
XP_005271201                                                           15    9605
XP_005270554                                                           15    9605
NP_001137459                                                           15    9605
NP_001137460                                                           15    9605
NP_004224                                                              15    9605
>XP_005249968
          Length = 673

 Score = 19.2 bits (38), Expect =   665
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1  MRMEMPQDS 9
          +++EMPQDS
Sbjct: 9  LKLEMPQDS 17
>NP_001363
          Length = 4486

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    MRMEMPQDS 9
            +R ++PQDS
Sbjct: 1532 IRAQLPQDS 1540
>NP_001075
          Length = 738

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   MRMEMPQ 7
           +RME+PQ
Sbjct: 472 LRMELPQ 478
>XP_006721530
          Length = 2746

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    MRMEMPQDS 9
            +R ++PQDS
Sbjct: 1532 IRAQLPQDS 1540
>XP_006721529
          Length = 2817

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    MRMEMPQDS 9
            +R ++PQDS
Sbjct: 1532 IRAQLPQDS 1540
>XP_006721528
          Length = 3869

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    MRMEMPQDS 9
            +R ++PQDS
Sbjct: 1532 IRAQLPQDS 1540
>NP_055180
          Length = 196

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           E+PQDS
Sbjct: 185 ELPQDS 190
>NP_037453
          Length = 465

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  RMEMPQ 7
          RM+MPQ
Sbjct: 53 RMQMPQ 58
>NP_057116
          Length = 364

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           EMP+DS
Sbjct: 336 EMPEDS 341
>NP_001008223
          Length = 364

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           EMP+DS
Sbjct: 336 EMPEDS 341
>NP_001274448
          Length = 468

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RMEMPQD 8
           R+E PQD
Sbjct: 223 RLERPQD 229
>NP_001274449
          Length = 468

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RMEMPQD 8
           R+E PQD
Sbjct: 223 RLERPQD 229
>NP_068659
          Length = 580

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RMEMPQD 8
           R+E PQD
Sbjct: 335 RLERPQD 341
>NP_068658
          Length = 539

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RMEMPQD 8
           R+E PQD
Sbjct: 294 RLERPQD 300
>NP_004349
          Length = 566

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RMEMPQD 8
           R+E PQD
Sbjct: 321 RLERPQD 327
>NP_001274447
          Length = 489

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RMEMPQD 8
           R+E PQD
Sbjct: 244 RLERPQD 250
>NP_001274453
          Length = 388

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RMEMPQD 8
           R+E PQD
Sbjct: 143 RLERPQD 149
>NP_001274445
          Length = 516

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RMEMPQD 8
           R+E PQD
Sbjct: 271 RLERPQD 277
>NP_001274451
          Length = 427

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RMEMPQD 8
           R+E PQD
Sbjct: 182 RLERPQD 188
>NP_001274446
          Length = 502

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RMEMPQD 8
           R+E PQD
Sbjct: 257 RLERPQD 263
>NP_060814
          Length = 475

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           E+PQDS
Sbjct: 275 ELPQDS 280
>NP_001135864
          Length = 477

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  MRMEMPQDS 9
          M  E P+DS
Sbjct: 74 MEFEFPEDS 82
>NP_001135863
          Length = 448

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  MRMEMPQDS 9
          M  E P+DS
Sbjct: 74 MEFEFPEDS 82
>NP_001130010
          Length = 1090

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   MEMPQDS 9
           ME+P+DS
Sbjct: 294 MEIPKDS 300
>NP_689648
          Length = 426

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   MRMEMPQ 7
           MRM MP+
Sbjct: 355 MRMSMPE 361
>NP_062822
          Length = 477

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  MRMEMPQDS 9
          M  E P+DS
Sbjct: 74 MEFEFPEDS 82
>XP_005277970
          Length = 532

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   MRMEMPQDS 9
           M  E P+DS
Sbjct: 129 MEFEFPEDS 137
>XP_006724911
          Length = 541

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   MRMEMPQDS 9
           M  E P+DS
Sbjct: 167 MEFEFPEDS 175
>XP_006724910
          Length = 570

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   MRMEMPQDS 9
           M  E P+DS
Sbjct: 167 MEFEFPEDS 175
>XP_006717973
          Length = 397

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           E+PQDS
Sbjct: 197 ELPQDS 202
>XP_006712555
          Length = 1786

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    MEMPQDS 9
            ME+P+DS
Sbjct: 1509 MEVPKDS 1515
>XP_006712554
          Length = 1885

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    MEMPQDS 9
            ME+P+DS
Sbjct: 1608 MEVPKDS 1614
>XP_005263717
          Length = 1953

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    MEMPQDS 9
            ME+P+DS
Sbjct: 1676 MEVPKDS 1682
>XP_005263716
          Length = 1953

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    MEMPQDS 9
            ME+P+DS
Sbjct: 1676 MEVPKDS 1682
>XP_006712553
          Length = 1953

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    MEMPQDS 9
            ME+P+DS
Sbjct: 1676 MEVPKDS 1682
>NP_079523
          Length = 1059

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   MEMPQDS 9
           ME+P+DS
Sbjct: 263 MEIPKDS 269
>NP_997246
          Length = 1909

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    MEMPQDS 9
            ME+P+DS
Sbjct: 1676 MEVPKDS 1682
>NP_001026
          Length = 4967

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    MRMEMPQDS 9
            M+M++ QDS
Sbjct: 3954 MQMKLSQDS 3962
>NP_001001924
          Length = 1270

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   MEMPQDS 9
           ME+P DS
Sbjct: 299 MEVPNDS 305
>NP_001001925
          Length = 1216

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   MEMPQDS 9
           ME+P DS
Sbjct: 299 MEVPNDS 305
>NP_115811
          Length = 1036

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           EMPQ+S
Sbjct: 408 EMPQES 413
>NP_001002759
          Length = 245

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  RMEMPQDS 9
          +ME P DS
Sbjct: 13 KMESPSDS 20
>NP_001230925
          Length = 4865

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    MRMEMPQDS 9
            M+M++ QDS
Sbjct: 3845 MQMKLSQDS 3853
>NP_002410
          Length = 847

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           EMP+DS
Sbjct: 386 EMPRDS 391
>NP_001027
          Length = 4870

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    MRMEMPQDS 9
            M+M++ QDS
Sbjct: 3850 MQMKLSQDS 3858
>NP_001271160
          Length = 880

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           EMP+DS
Sbjct: 150 EMPKDS 155
>NP_001271161
          Length = 837

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           EMP+DS
Sbjct: 107 EMPKDS 112
>NP_001275521
          Length = 373

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  MRMEMPQDS 9
          +RM  PQD+
Sbjct: 72 LRMVRPQDT 80
>NP_001275520
          Length = 276

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   MRMEMPQDS 9
           +RM  PQD+
Sbjct: 222 LRMVRPQDT 230
>NP_116184
          Length = 377

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   MRMEMPQD 8
           +R+EMP +
Sbjct: 356 LRLEMPNE 363
>NP_001035370
          Length = 204

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  RMEMPQD 8
          RME PQ+
Sbjct: 59 RMETPQE 65
>NP_079445
          Length = 276

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   MRMEMPQDS 9
           +RM  PQD+
Sbjct: 222 LRMVRPQDT 230
>NP_001138299
          Length = 346

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   MRMEMPQD 8
           +R+EMP +
Sbjct: 325 LRLEMPNE 332
>NP_001137461
          Length = 638

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           E+PQDS
Sbjct: 200 EVPQDS 205
>NP_001271159
          Length = 1104

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           EMP+DS
Sbjct: 413 EMPKDS 418
>NP_149132
          Length = 1118

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           EMP+DS
Sbjct: 413 EMPKDS 418
>NP_061121
          Length = 754

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   MRMEMPQDS 9
           +RM  PQD+
Sbjct: 222 LRMVRPQDT 230
>NP_001275519
          Length = 754

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   MRMEMPQDS 9
           +RM  PQD+
Sbjct: 222 LRMVRPQDT 230
>XP_006720213
          Length = 933

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           EMP+DS
Sbjct: 217 EMPKDS 222
>XP_006720212
          Length = 956

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           EMP+DS
Sbjct: 217 EMPKDS 222
>XP_005267740
          Length = 1081

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           EMP+DS
Sbjct: 413 EMPKDS 418
>XP_005269579
          Length = 254

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  RMEMPQDS 9
          +ME P DS
Sbjct: 22 KMESPSDS 29
>XP_005269578
          Length = 307

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  RMEMPQDS 9
          +ME P DS
Sbjct: 75 KMESPSDS 82
>XP_005273640
          Length = 969

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   MEMPQDS 9
           ME+P DS
Sbjct: 299 MEVPNDS 305
>XP_005273639
          Length = 1216

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   MEMPQDS 9
           ME+P DS
Sbjct: 299 MEVPNDS 305
>XP_005273638
          Length = 1228

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   MEMPQDS 9
           ME+P DS
Sbjct: 299 MEVPNDS 305
>XP_005273637
          Length = 1228

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   MEMPQDS 9
           ME+P DS
Sbjct: 299 MEVPNDS 305
>XP_005273636
          Length = 1270

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   MEMPQDS 9
           ME+P DS
Sbjct: 299 MEVPNDS 305
>XP_005273635
          Length = 1282

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   MEMPQDS 9
           ME+P DS
Sbjct: 299 MEVPNDS 305
>XP_005273634
          Length = 1282

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   MEMPQDS 9
           ME+P DS
Sbjct: 299 MEVPNDS 305
>XP_005265380
          Length = 753

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   MRMEMPQDS 9
           +RM  PQD+
Sbjct: 222 LRMVRPQDT 230
>XP_006711873
          Length = 4954

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    MRMEMPQDS 9
            M+M++ QDS
Sbjct: 3941 MQMKLSQDS 3949
>XP_006711871
          Length = 4906

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    MRMEMPQDS 9
            M+M++ QDS
Sbjct: 3893 MQMKLSQDS 3901
>XP_006711870
          Length = 4965

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    MRMEMPQDS 9
            M+M++ QDS
Sbjct: 3952 MQMKLSQDS 3960
>XP_006711869
          Length = 4973

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    MRMEMPQDS 9
            M+M++ QDS
Sbjct: 3960 MQMKLSQDS 3968
>XP_006711868
          Length = 4975

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    MRMEMPQDS 9
            M+M++ QDS
Sbjct: 3962 MQMKLSQDS 3970
>XP_006711867
          Length = 4977

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    MRMEMPQDS 9
            M+M++ QDS
Sbjct: 3964 MQMKLSQDS 3972
>XP_006711866
          Length = 4984

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    MRMEMPQDS 9
            M+M++ QDS
Sbjct: 3971 MQMKLSQDS 3979
>XP_006711865
          Length = 4985

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    MRMEMPQDS 9
            M+M++ QDS
Sbjct: 3972 MQMKLSQDS 3980
>XP_005271201
          Length = 715

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           E+PQDS
Sbjct: 277 EVPQDS 282
>XP_005270554
          Length = 715

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           E+PQDS
Sbjct: 277 EVPQDS 282
>NP_001137459
          Length = 667

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           E+PQDS
Sbjct: 200 EVPQDS 205
>NP_001137460
          Length = 638

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   EMPQDS 9
           E+PQDS
Sbjct: 200 EVPQDS 205
>NP_004224
          Length = 205

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  RMEMPQD 8
          RME PQ+
Sbjct: 59 RMETPQE 65
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.317    0.121    0.334 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 768,180
Number of extensions: 1514
Number of successful extensions: 84
Number of sequences better than 10000.0: 84
Number of HSP's gapped: 84
Number of HSP's successfully gapped: 84
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.9 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package