Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000360 20 509 XP_005268094 20 509 NP_000224 17 3301 XP_005264366 17 3301 XP_006712078 17 3301 NP_059988 17 4312 NP_115691 16 5631 XP_005263560 16 5631 NP_001193770 16 7355 NP_001186308 16 7355 NP_001131074 16 7355 NP_057039 16 7355 NP_612373 16 7355 NP_001186307 16 7355 NP_004184 16 7355 XP_006718114 16 7355 XP_005270318 16 7355 XP_006718113 16 7355 XP_006718112 16 7355 XP_006718111 16 7355 XP_006718110 16 7355 XP_005263397 16 7355 XP_005263396 16 7355 XP_005263395 16 7355 XP_005264409 16 7355 XP_005264408 16 7355 NP_001153115 15 9605 NP_060819 15 9605 NP_001164491 15 9605 NP_001158220 15 9605 NP_001158219 15 9605 NP_009142 15 9605 NP_001158218 15 9605 NP_059113 15 9605 NP_689636 15 9605 NP_116256 15 9605 XP_005262135 15 9605 XP_005262134 15 9605 XP_005255016 15 9605 XP_005255015 15 9605 XP_005255014 15 9605 XP_006720666 15 9605 XP_006720665 15 9605 XP_005255012 15 9605 XP_005254442 15 9605 XP_006719091 15 9605 XP_006719090 15 9605 XP_005253235 15 9605 NP_002364 15 9605>NP_000360 Length = 764 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MRLDQKIRL 9 MRLD+KIRL Sbjct: 527 MRLDRKIRL 535>XP_005268094 Length = 764 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MRLDQKIRL 9 MRLD+KIRL Sbjct: 527 MRLDRKIRL 535>NP_000224 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 + LDQK+RL Sbjct: 472 IHLDQKLRL 480>XP_005264366 Length = 380 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 + LDQK+RL Sbjct: 153 IHLDQKLRL 161>XP_006712078 Length = 389 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 + LDQK+RL Sbjct: 162 IHLDQKLRL 170>NP_059988 Length = 368 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LDQKIRL 9 LDQK+RL Sbjct: 264 LDQKLRL 270>NP_115691 Length = 321 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MRLDQKIR 8 M+L+QK+R Sbjct: 156 MQLEQKVR 163>XP_005263560 Length = 254 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MRLDQKIR 8 M+L+QK+R Sbjct: 89 MQLEQKVR 96>NP_001193770 Length = 453 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RLDQKI 7 RLDQKI Sbjct: 432 RLDQKI 437>NP_001186308 Length = 1855 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 +RLD+ +RL Sbjct: 776 LRLDEALRL 784>NP_001131074 Length = 274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MRLDQKI 7 +R+DQKI Sbjct: 80 LRIDQKI 86>NP_057039 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MRLDQKI 7 +R+DQKI Sbjct: 103 LRIDQKI 109>NP_612373 Length = 845 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 M LD++IRL Sbjct: 792 MYLDEEIRL 800>NP_001186307 Length = 1856 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 +RLD+ +RL Sbjct: 777 LRLDEALRL 785>NP_004184 Length = 1859 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 +RLD+ +RL Sbjct: 776 LRLDEALRL 784>XP_006718114 Length = 1850 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 +RLD+ +RL Sbjct: 810 LRLDEALRL 818>XP_005270318 Length = 1860 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 +RLD+ +RL Sbjct: 777 LRLDEALRL 785>XP_006718113 Length = 1881 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 +RLD+ +RL Sbjct: 798 LRLDEALRL 806>XP_006718112 Length = 1889 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 +RLD+ +RL Sbjct: 810 LRLDEALRL 818>XP_006718111 Length = 1892 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 +RLD+ +RL Sbjct: 809 LRLDEALRL 817>XP_006718110 Length = 1893 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 +RLD+ +RL Sbjct: 810 LRLDEALRL 818>XP_005263397 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 M LD++IRL Sbjct: 487 MYLDEEIRL 495>XP_005263396 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 M LD++IRL Sbjct: 679 MYLDEEIRL 687>XP_005263395 Length = 766 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 M LD++IRL Sbjct: 713 MYLDEEIRL 721>XP_005264409 Length = 170 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MRLDQKI 7 +R+DQKI Sbjct: 103 LRIDQKI 109>XP_005264408 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MRLDQKI 7 +R+DQKI Sbjct: 103 LRIDQKI 109>NP_001153115 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQKIRL 9 LDQK+R+ Sbjct: 253 LDQKLRV 259>NP_060819 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQKIRL 9 LDQK+R+ Sbjct: 253 LDQKLRV 259>NP_001164491 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 + LD+KI+L Sbjct: 42 LSLDEKIKL 50>NP_001158220 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MRLDQKIR 8 +RL+QKI+ Sbjct: 207 VRLEQKIK 214>NP_001158219 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MRLDQKIR 8 +RL+QKI+ Sbjct: 207 VRLEQKIK 214>NP_009142 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MRLDQKIR 8 +RL+QKI+ Sbjct: 207 VRLEQKIK 214>NP_001158218 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MRLDQKIR 8 +RL+QKI+ Sbjct: 207 VRLEQKIK 214>NP_059113 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 + LD+KI+L Sbjct: 230 VHLDEKIKL 238>NP_689636 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 + LD+KI+L Sbjct: 42 LSLDEKIKL 50>NP_116256 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RLDQKIR 8 RL+QK+R Sbjct: 622 RLEQKLR 628>XP_005262135 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 + LD+KI+L Sbjct: 42 LSLDEKIKL 50>XP_005262134 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MRLDQKIRL 9 + LD+KI+L Sbjct: 42 LSLDEKIKL 50>XP_005255016 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQKIRL 9 LDQK+R+ Sbjct: 253 LDQKLRV 259>XP_005255015 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQKIRL 9 LDQK+R+ Sbjct: 253 LDQKLRV 259>XP_005255014 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQKIRL 9 LDQK+R+ Sbjct: 253 LDQKLRV 259>XP_006720666 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQKIRL 9 LDQK+R+ Sbjct: 253 LDQKLRV 259>XP_006720665 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQKIRL 9 LDQK+R+ Sbjct: 253 LDQKLRV 259>XP_005255012 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LDQKIRL 9 LDQK+R+ Sbjct: 253 LDQKLRV 259>XP_005254442 Length = 3041 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LDQKIR 8 LDQK+R Sbjct: 1737 LDQKVR 1742>XP_006719091 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MRLDQKIR 8 +RL+QKI+ Sbjct: 207 VRLEQKIK 214>XP_006719090 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MRLDQKIR 8 +RL+QKI+ Sbjct: 207 VRLEQKIK 214>XP_005253235 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RLDQKIR 8 RL+QK+R Sbjct: 623 RLEQKLR 629>NP_002364 Length = 2803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LDQKIR 8 LDQK+R Sbjct: 1499 LDQKVR 1504Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.152 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 442,544 Number of extensions: 752 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |