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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004110                                                              18    1135
NP_443730                                                              17    4312
NP_694543                                                              16    5631
NP_055861                                                              16    7355
XP_005272230                                                           16    7355
XP_005272229                                                           16    7355
XP_005272228                                                           16    7355
NP_620482                                                              15    9605
NP_001077084                                                           15    9605
NP_055816                                                              15    9605
NP_937798                                                              15    9605
NP_004640                                                              15    9605
XP_006724119                                                           15    9605
XP_006724118                                                           15    9605
XP_005261243                                                           15    9605
XP_005261242                                                           15    9605
XP_005261241                                                           15    9605
XP_006723970                                                           15    9605
XP_006723969                                                           15    9605
XP_006723968                                                           15    9605
XP_006723967                                                           15    9605
XP_006723966                                                           15    9605
XP_006723965                                                           15    9605
XP_006723964                                                           15    9605
XP_006717897                                                           15    9605
XP_006717896                                                           15    9605
XP_006712362                                                           15    9605
XP_006710169                                                           15    9605
XP_006710168                                                           15    9605
XP_006710167                                                           15    9605
XP_006710166                                                           15    9605
XP_006710165                                                           15    9605
XP_006710164                                                           15    9605
XP_006710163                                                           15    9605
NP_543140                                                              15    9605
NP_001004696                                                           15    9605

>NP_004110
          Length = 993

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   MRGSREVQI 9
           M GSREVQI
Sbjct: 737 MPGSREVQI 745



>NP_443730
          Length = 327

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   RGSREVQI 9
           RGS EVQI
Sbjct: 135 RGSDEVQI 142



>NP_694543
          Length = 707

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  MRGSREVQ 8
          +RG+REV+
Sbjct: 77 LRGTREVE 84



>NP_055861
          Length = 2677

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2    RGSREVQ 8
            RG RE+Q
Sbjct: 2102 RGGREIQ 2108



>XP_005272230
          Length = 2706

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2    RGSREVQ 8
            RG RE+Q
Sbjct: 2102 RGGREIQ 2108



>XP_005272229
          Length = 2706

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2    RGSREVQ 8
            RG RE+Q
Sbjct: 2102 RGGREIQ 2108



>XP_005272228
          Length = 2706

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2    RGSREVQ 8
            RG RE+Q
Sbjct: 2102 RGGREIQ 2108



>NP_620482
          Length = 1341

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2    RGSREVQ 8
            RGS EVQ
Sbjct: 1142 RGSAEVQ 1148



>NP_001077084
          Length = 1314

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2    RGSREVQ 8
            RGS EVQ
Sbjct: 1115 RGSAEVQ 1121



>NP_055816
          Length = 3664

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2    RGSREVQI 9
            +GS+EV++
Sbjct: 2316 KGSKEVEV 2323



>NP_937798
          Length = 237

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>NP_004640
          Length = 268

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006724119
          Length = 175

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006724118
          Length = 188

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_005261243
          Length = 194

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_005261242
          Length = 217

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_005261241
          Length = 251

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006723970
          Length = 175

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006723969
          Length = 188

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006723968
          Length = 194

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006723967
          Length = 217

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006723966
          Length = 237

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006723965
          Length = 251

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006723964
          Length = 268

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006717897
          Length = 1160

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  MRGSREV 7
          M GSRE+
Sbjct: 4  MEGSREI 10



>XP_006717896
          Length = 1186

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  MRGSREV 7
          M GSRE+
Sbjct: 30 MEGSREI 36



>XP_006712362
          Length = 1350

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2    RGSREVQ 8
            RGS EVQ
Sbjct: 1151 RGSAEVQ 1157



>XP_006710169
          Length = 175

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006710168
          Length = 191

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006710167
          Length = 194

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006710166
          Length = 217

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006710165
          Length = 237

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006710164
          Length = 251

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>XP_006710163
          Length = 268

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  RGSREVQI 9
          RG  EVQI
Sbjct: 72 RGGAEVQI 79



>NP_543140
          Length = 142

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   MRGSREV 7
           +RGSR+V
Sbjct: 114 LRGSRDV 120



>NP_001004696
          Length = 348

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RGSREV 7
           RGSRE+
Sbjct: 201 RGSREI 206



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.324    0.135    0.343 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 546,538
Number of extensions: 724
Number of successful extensions: 36
Number of sequences better than 10000.0: 36
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 36
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.0 bits)
S2: 28 (15.4 bits)