Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 20 509 NP_036462 20 509 NP_001243397 20 509 XP_005269721 20 509 NP_001092882 18 1482 NP_006757 18 1482 NP_001092883 18 1482 XP_005273706 18 1482 NP_004766 16 5631 XP_006722642 16 5631 XP_006722641 16 5631 XP_005258444 16 5631 NP_872363 16 7355 XP_005271570 16 7355 XP_005271569 16 7355 XP_006718878 16 7355 XP_005271568 16 7355 NP_115529 15 9605 NP_001161851 15 9605 NP_001161850 15 9605>NP_001243398 Length = 1781 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 MNMSVNLM 8 MNMSVNLM Sbjct: 1673 MNMSVNLM 1680>NP_036462 Length = 2073 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 MNMSVNLM 8 MNMSVNLM Sbjct: 1965 MNMSVNLM 1972>NP_001243397 Length = 1890 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 MNMSVNLM 8 MNMSVNLM Sbjct: 1782 MNMSVNLM 1789>XP_005269721 Length = 2073 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 MNMSVNLM 8 MNMSVNLM Sbjct: 1965 MNMSVNLM 1972>NP_001092882 Length = 2004 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 MNMSVNLM 8 MNM VNLM Sbjct: 1897 MNMGVNLM 1904>NP_006757 Length = 2004 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 MNMSVNLM 8 MNM VNLM Sbjct: 1897 MNMGVNLM 1904>NP_001092883 Length = 2004 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 MNMSVNLM 8 MNM VNLM Sbjct: 1897 MNMGVNLM 1904>XP_005273706 Length = 1997 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 MNMSVNLM 8 MNM VNLM Sbjct: 1890 MNMGVNLM 1897>NP_004766 Length = 382 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NMSVNLM 8 N+SVNLM Sbjct: 367 NISVNLM 373>XP_006722642 Length = 338 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NMSVNLM 8 N+SVNLM Sbjct: 323 NISVNLM 329>XP_006722641 Length = 344 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NMSVNLM 8 N+SVNLM Sbjct: 329 NISVNLM 335>XP_005258444 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NMSVNLM 8 N+SVNLM Sbjct: 355 NISVNLM 361>NP_872363 Length = 1499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNMSVNL 7 MNM+VN+ Sbjct: 772 MNMNVNM 778Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNMSVNL 7 MNM++NL Sbjct: 778 MNMNMNL 784>XP_005271570 Length = 1462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNMSVNL 7 MNM+VN+ Sbjct: 735 MNMNVNM 741Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNMSVNL 7 MNM++NL Sbjct: 741 MNMNMNL 747>XP_005271569 Length = 1462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNMSVNL 7 MNM+VN+ Sbjct: 735 MNMNVNM 741Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNMSVNL 7 MNM++NL Sbjct: 741 MNMNMNL 747>XP_006718878 Length = 1499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNMSVNL 7 MNM+VN+ Sbjct: 772 MNMNVNM 778Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNMSVNL 7 MNM++NL Sbjct: 778 MNMNMNL 784>XP_005271568 Length = 1499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNMSVNL 7 MNM+VN+ Sbjct: 772 MNMNVNM 778Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNMSVNL 7 MNM++NL Sbjct: 778 MNMNMNL 784>NP_115529 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNMSVNL 7 MN++VNL Sbjct: 101 MNLTVNL 107>NP_001161851 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNMSVNL 7 MN++VNL Sbjct: 139 MNLTVNL 145>NP_001161850 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNMSVNL 7 MN++VNL Sbjct: 151 MNLTVNL 157Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.114 0.272 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 242,481 Number of extensions: 246 Number of successful extensions: 25 Number of sequences better than 10000.0: 20 Number of HSP's gapped: 25 Number of HSP's successfully gapped: 25 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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