Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 299 NP_055571 17 3301 NP_001008938 17 3301 NP_001037835 17 4312 NP_005877 17 4312 XP_006721186 17 4312 XP_005255829 17 4312 XP_006721185 17 4312 XP_006721184 17 4312 NP_004534 16 7355 NP_001258137 16 7355 NP_001157980 16 7355 NP_001157979 16 7355 XP_005246674 16 7355 XP_005246673 16 7355 XP_005246672 16 7355 XP_005246670 16 7355 XP_005246669 16 7355 XP_005246668 16 7355 XP_005246667 16 7355 XP_005246665 16 7355 XP_006712605 16 7355 XP_006712604 16 7355 XP_005246663 16 7355 XP_005246660 16 7355 XP_005246661 16 7355 XP_005246659 16 7355 XP_005246658 16 7355 XP_005246657 16 7355 XP_005246656 16 7355 XP_005246655 16 7355 XP_005246654 16 7355 XP_005246653 16 7355 XP_005246652 16 7355 XP_005246649 16 7355 XP_005246651 16 7355 XP_005246650 16 7355 XP_005246648 16 7355 XP_005246647 16 7355 NP_000375 15 9605 NP_001158238 15 9605 NP_078997 15 9605 NP_001131074 15 9605 NP_057039 15 9605 NP_008816 15 9605 NP_001254500 15 9605 NP_001254501 15 9605 NP_060891 15 9605 XP_005256014 15 9605 XP_006712091 15 9605 XP_005264408 15 9605>NP_004295 Length = 1620 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MNMAFSQSN 9 +NMAFSQSN Sbjct: 1476 VNMAFSQSN 1484>NP_055571 Length = 1972 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNMAFSQSN 9 ++MAFSQ N Sbjct: 720 VSMAFSQKN 728>NP_001008938 Length = 2032 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNMAFSQSN 9 ++MAFSQ N Sbjct: 720 VSMAFSQKN 728>NP_001037835 Length = 326 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNMAFSQSN 9 + MAFSQS+ Sbjct: 23 LGMAFSQSH 31>NP_005877 Length = 655 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNMAFSQSN 9 + +AFSQSN Sbjct: 286 IGVAFSQSN 294>XP_006721186 Length = 658 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNMAFSQSN 9 + +AFSQSN Sbjct: 286 IGVAFSQSN 294>XP_005255829 Length = 672 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNMAFSQSN 9 + +AFSQSN Sbjct: 286 IGVAFSQSN 294>XP_006721185 Length = 675 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNMAFSQSN 9 + +AFSQSN Sbjct: 286 IGVAFSQSN 294>XP_006721184 Length = 675 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNMAFSQSN 9 + +AFSQSN Sbjct: 286 IGVAFSQSN 294>NP_004534 Length = 6669 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>NP_001258137 Length = 8560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>NP_001157980 Length = 8525 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>NP_001157979 Length = 8525 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246674 Length = 7553 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246673 Length = 8018 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246672 Length = 8277 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246670 Length = 8282 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246669 Length = 8282 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246668 Length = 8308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246667 Length = 8308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246665 Length = 8339 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_006712605 Length = 8370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_006712604 Length = 8370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246663 Length = 8370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246660 Length = 8370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246661 Length = 8370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246659 Length = 8401 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246658 Length = 8401 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246657 Length = 8432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246656 Length = 8432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246655 Length = 8463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246654 Length = 8463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246653 Length = 8463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246652 Length = 8494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246649 Length = 8494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246651 Length = 8494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246650 Length = 8494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246648 Length = 8494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>XP_005246647 Length = 8494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM +Q+N Sbjct: 1976 MNMVLAQNN 1984>NP_000375 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 M+M FS+ N Sbjct: 1587 MDMTFSKQN 1595>NP_001158238 Length = 2789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NMAFSQSN 9 N+A+SQS+ Sbjct: 688 NVAYSQSS 695>NP_078997 Length = 3616 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NMAFSQSN 9 N+A+SQS+ Sbjct: 1599 NVAYSQSS 1606>NP_001131074 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM+FS N Sbjct: 241 MNMSFSFLN 249>NP_057039 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM+FS N Sbjct: 264 MNMSFSFLN 272>NP_008816 Length = 3703 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NMAFSQSN 9 N+A+SQS+ Sbjct: 1602 NVAYSQSS 1609>NP_001254500 Length = 928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MN+AF+ N Sbjct: 863 MNIAFNDMN 871>NP_001254501 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MN+AF+ N Sbjct: 403 MNIAFNDMN 411>NP_060891 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MN+AF+ N Sbjct: 852 MNIAFNDMN 860>XP_005256014 Length = 3702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NMAFSQSN 9 N+A+SQS+ Sbjct: 1601 NVAYSQSS 1608>XP_006712091 Length = 180 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM+FS N Sbjct: 147 MNMSFSFLN 155>XP_005264408 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MNMAFSQSN 9 MNM+FS N Sbjct: 264 MNMSFSFLN 272Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.108 0.273 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 295,810 Number of extensions: 287 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |