Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 21 229 XP_006713721 21 229 NP_076425 17 2528 XP_005255569 17 2528 XP_005255568 17 2528 NP_001135768 17 4312 NP_001135766 17 4312 NP_001135767 17 4312 NP_055902 17 4312 XP_005266373 17 4312 XP_005266372 17 4312 XP_005266374 17 4312 XP_005266370 17 4312 XP_005266371 17 4312 NP_078966 16 5631 NP_690621 16 5631 NP_690620 16 5631 NP_690619 16 5631 NP_061956 16 5631 NP_002812 16 5631 NP_001257327 16 5631 XP_005263127 16 5631 XP_005265836 16 5631 XP_005265835 16 5631 XP_005271003 16 5631 XP_005271002 16 5631 NP_061908 16 5631 NP_078858 16 7355 NP_001278232 16 7355 NP_001278214 16 7355 NP_115661 16 7355 NP_001026897 16 7355 NP_057382 16 7355 NP_076411 16 7355 NP_001092010 15 9605 NP_001159970 15 9605 NP_001186759 15 9605 NP_006656 15 9605 NP_710159 15 9605 NP_060590 15 9605 NP_277045 15 9605 NP_006157 15 9605 NP_001615 15 9605 NP_003128 15 9605 NP_489479 15 9605 NP_891977 15 9605 NP_150287 15 9605 NP_892114 15 9605 XP_006720302 15 9605 XP_005268074 15 9605 XP_005268966 15 9605 XP_005268967 15 9605 XP_005268965 15 9605 XP_005251321 15 9605 XP_006716521 15 9605 XP_005266896 15 9605>NP_006209 Length = 1068 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MNGDTSTKS 9 MNG+TSTKS Sbjct: 318 MNGETSTKS 326>XP_006713721 Length = 1068 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MNGDTSTKS 9 MNG+TSTKS Sbjct: 318 MNGETSTKS 326>NP_076425 Length = 218 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NGDTSTK 8 NGDTST+ Sbjct: 181 NGDTSTE 187>XP_005255569 Length = 225 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NGDTSTK 8 NGDTST+ Sbjct: 188 NGDTSTE 194>XP_005255568 Length = 248 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NGDTSTK 8 NGDTST+ Sbjct: 211 NGDTSTE 217>NP_001135768 Length = 666 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNGDTSTKS 9 +NG+TST S Sbjct: 141 VNGNTSTPS 149>NP_001135766 Length = 666 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNGDTSTKS 9 +NG+TST S Sbjct: 141 VNGNTSTPS 149>NP_001135767 Length = 666 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNGDTSTKS 9 +NG+TST S Sbjct: 141 VNGNTSTPS 149>NP_055902 Length = 666 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNGDTSTKS 9 +NG+TST S Sbjct: 141 VNGNTSTPS 149>XP_005266373 Length = 666 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNGDTSTKS 9 +NG+TST S Sbjct: 141 VNGNTSTPS 149>XP_005266372 Length = 666 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNGDTSTKS 9 +NG+TST S Sbjct: 141 VNGNTSTPS 149>XP_005266374 Length = 666 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNGDTSTKS 9 +NG+TST S Sbjct: 141 VNGNTSTPS 149>XP_005266370 Length = 666 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNGDTSTKS 9 +NG+TST S Sbjct: 141 VNGNTSTPS 149>XP_005266371 Length = 666 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNGDTSTKS 9 +NG+TST S Sbjct: 141 VNGNTSTPS 149>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MNGDTSTKS 9 M+ DTST+S Sbjct: 6419 MSPDTSTRS 6427>NP_690621 Length = 1014 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MNGDTSTKS 9 + GD STKS Sbjct: 923 LEGDFSTKS 931>NP_690620 Length = 940 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MNGDTSTKS 9 + GD STKS Sbjct: 849 LEGDFSTKS 857>NP_690619 Length = 1030 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MNGDTSTKS 9 + GD STKS Sbjct: 939 LEGDFSTKS 947>NP_061956 Length = 481 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NGDTSTK 8 NGD++TK Sbjct: 156 NGDSATK 162>NP_002812 Length = 1070 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MNGDTSTKS 9 + GD STKS Sbjct: 979 LEGDFSTKS 987>NP_001257327 Length = 1078 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MNGDTSTKS 9 + GD STKS Sbjct: 987 LEGDFSTKS 995>XP_005263127 Length = 1134 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GDTSTKS 9 GDTST S Sbjct: 996 GDTSTSS 1002>XP_005265836 Length = 549 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MNGDTSTKS 9 + GDT+TK+ Sbjct: 488 VTGDTNTKN 496>XP_005265835 Length = 558 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MNGDTSTKS 9 + GDT+TK+ Sbjct: 497 VTGDTNTKN 505>XP_005271003 Length = 340 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NGDTSTK 8 NGD++TK Sbjct: 15 NGDSATK 21>XP_005271002 Length = 467 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NGDTSTK 8 NGD++TK Sbjct: 142 NGDSATK 148>NP_061908 Length = 1135 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GDTSTKS 9 GDTST S Sbjct: 997 GDTSTSS 1003>NP_078858 Length = 4981 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MNGDTST 7 +NGDT T Sbjct: 1568 INGDTDT 1574>NP_001278232 Length = 4983 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MNGDTST 7 +NGDT T Sbjct: 1568 INGDTDT 1574>NP_001278214 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MNGDTST 7 +NGDT T Sbjct: 1568 INGDTDT 1574>NP_115661 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NGDTSTK 8 NGDT+ K Sbjct: 206 NGDTANK 212>NP_001026897 Length = 369 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NGDTSTK 8 NGDT+ K Sbjct: 253 NGDTANK 259>NP_057382 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MNGDTSTK 8 MNG+TS + Sbjct: 160 MNGETSVE 167>NP_076411 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MNGDTSTKS 9 ++GD STK+ Sbjct: 218 ISGDASTKA 226>NP_001092010 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MNGDTSTK 8 +NG T+TK Sbjct: 300 LNGRTATK 307>NP_001159970 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MNGDTSTK 8 +NG T+TK Sbjct: 300 LNGRTATK 307>NP_001186759 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MNGDTSTK 8 +NG T+TK Sbjct: 242 LNGRTATK 249>NP_006656 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MNGDTSTK 8 +NG T+TK Sbjct: 300 LNGRTATK 307>NP_710159 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GDTSTKS 9 GDT T+S Sbjct: 153 GDTGTRS 159>NP_060590 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 MNGDTSTKS 9 MN TST S Sbjct: 1 MNSSTSTMS 9>NP_277045 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MNGDTSTKS 9 M+GD+S+ S Sbjct: 1 MDGDSSSSS 9>NP_006157 Length = 207 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNGDTST 7 M+GD+ST Sbjct: 3 MDGDSST 9>NP_001615 Length = 1723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MNGDTS 6 MNGD+S Sbjct: 359 MNGDSS 364>NP_003128 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NGDTST 7 NGD+ST Sbjct: 402 NGDSST 407>NP_489479 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NGDTST 7 NG+TST Sbjct: 118 NGETST 123>NP_891977 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NGDTST 7 NG+TST Sbjct: 118 NGETST 123>NP_150287 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NGDTST 7 NG+TST Sbjct: 118 NGETST 123>NP_892114 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NGDTST 7 NG+TST Sbjct: 118 NGETST 123>XP_006720302 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NGDTST 7 NG+TST Sbjct: 118 NGETST 123>XP_005268074 Length = 928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NGDTST 7 NG+TST Sbjct: 118 NGETST 123>XP_005268966 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNGDTST 7 M+GD+ST Sbjct: 4 MDGDSST 10>XP_005268967 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNGDTST 7 M+GD+ST Sbjct: 4 MDGDSST 10>XP_005268965 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MNGDTST 7 M+GD+ST Sbjct: 4 MDGDSST 10>XP_005251321 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 MNGDTSTKS 9 MN TST S Sbjct: 1 MNSSTSTMS 9>XP_006716521 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 MNGDTSTKS 9 MN TST S Sbjct: 1 MNSSTSTMS 9>XP_005266896 Length = 2131 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MNGDTS 6 MNGD+S Sbjct: 767 MNGDSS 772Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.287 0.103 0.257 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 658,271 Number of extensions: 1267 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |