Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004963 20 390 XP_005251512 20 390 NP_000124 17 3301 XP_005262454 17 3301 NP_068770 17 4312 XP_006716795 17 4312 NP_065871 16 5631 NP_072174 16 5631 XP_006713136 16 5631 XP_006712785 16 5631 XP_005246883 16 5631 XP_005246882 16 5631 XP_006712784 16 5631 NP_001419 16 7355 NP_009057 16 7355 NP_699177 16 7355 XP_006710496 16 7355 NP_002687 16 7355 NP_115532 15 9605 NP_076414 15 9605 NP_001002259 15 9605 NP_001177779 15 9605 NP_001177776 15 9605 NP_037448 15 9605 NP_001177778 15 9605 NP_001193785 15 9605 NP_001245245 15 9605 NP_060568 15 9605 NP_001245244 15 9605 XP_006719211 15 9605 XP_006719210 15 9605 XP_006719209 15 9605 XP_006719208 15 9605 XP_006719207 15 9605 XP_006719206 15 9605 XP_006719205 15 9605 XP_006719204 15 9605 XP_006719203 15 9605 XP_006719202 15 9605 XP_006719201 15 9605 XP_006719200 15 9605 XP_005247237 15 9605 XP_006713587 15 9605 XP_005247233 15 9605 XP_006713586 15 9605>NP_004963 Length = 1132 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MTEMEGTS 9 MTEMEGTS Sbjct: 8 MTEMEGTS 15>XP_005251512 Length = 1132 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MTEMEGTS 9 MTEMEGTS Sbjct: 8 MTEMEGTS 15>NP_000124 Length = 461 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MTEMEGTS 9 +TE+EGTS Sbjct: 416 VTEVEGTS 423>XP_005262454 Length = 418 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MTEMEGTS 9 +TE+EGTS Sbjct: 373 VTEVEGTS 380>NP_068770 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MMTEMEGTS 9 +MTE GTS Sbjct: 158 LMTECSGTS 166>XP_006716795 Length = 374 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MMTEMEGTS 9 +MTE GTS Sbjct: 158 LMTECSGTS 166>NP_065871 Length = 1659 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EMEGTS 9 EMEGTS Sbjct: 600 EMEGTS 605>NP_072174 Length = 1735 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EMEGTS 9 EMEGTS Sbjct: 955 EMEGTS 960>XP_006713136 Length = 1022 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MTEMEGT 8 MT+M+GT Sbjct: 1 MTDMDGT 7>XP_006712785 Length = 1352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EMEGTS 9 EMEGTS Sbjct: 528 EMEGTS 533>XP_005246883 Length = 1352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EMEGTS 9 EMEGTS Sbjct: 528 EMEGTS 533>XP_005246882 Length = 1518 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EMEGTS 9 EMEGTS Sbjct: 694 EMEGTS 699>XP_006712784 Length = 1784 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EMEGTS 9 EMEGTS Sbjct: 960 EMEGTS 965>NP_001419 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MMTEMEGT 8 +M EM+GT Sbjct: 93 LMIEMDGT 100>NP_009057 Length = 806 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MMTEMEGTS 9 ++TEM+G S Sbjct: 604 ILTEMDGMS 612>NP_699177 Length = 799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MMTEMEGTS 9 ++TEM GT+ Sbjct: 349 ILTEMPGTT 357>XP_006710496 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MMTEMEGT 8 +M EM+GT Sbjct: 93 LMIEMDGT 100>NP_002687 Length = 172 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MMTEMEGT 8 + TE+EGT Sbjct: 30 LFTEVEGT 37>NP_115532 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 623 LMTQIQGT 630>NP_076414 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 623 LMTQIQGT 630>NP_001002259 Length = 1127 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 623 LMTQIQGT 630>NP_001177779 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MTEMEGTS 9 +TEM+G S Sbjct: 641 LTEMDGPS 648>NP_001177776 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MTEMEGTS 9 +TEM+G S Sbjct: 570 LTEMDGPS 577>NP_037448 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MTEMEGTS 9 +TEM+G S Sbjct: 567 LTEMDGPS 574>NP_001177778 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MTEMEGTS 9 +TEM+G S Sbjct: 638 LTEMDGPS 645>NP_001193785 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 623 LMTQIQGT 630>NP_001245245 Length = 883 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MTEMEG 7 MTEM+G Sbjct: 261 MTEMQG 266>NP_060568 Length = 883 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MTEMEG 7 MTEM+G Sbjct: 261 MTEMQG 266>NP_001245244 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MTEMEG 7 MTEM+G Sbjct: 292 MTEMQG 297>XP_006719211 Length = 794 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 290 LMTQIQGT 297>XP_006719210 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 623 LMTQIQGT 630>XP_006719209 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 623 LMTQIQGT 630>XP_006719208 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 623 LMTQIQGT 630>XP_006719207 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 623 LMTQIQGT 630>XP_006719206 Length = 1046 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 542 LMTQIQGT 549>XP_006719205 Length = 1057 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 623 LMTQIQGT 630>XP_006719204 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 623 LMTQIQGT 630>XP_006719203 Length = 1091 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 623 LMTQIQGT 630>XP_006719202 Length = 1092 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 623 LMTQIQGT 630>XP_006719201 Length = 1106 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 623 LMTQIQGT 630>XP_006719200 Length = 1126 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MMTEMEGT 8 +MT+++GT Sbjct: 623 LMTQIQGT 630>XP_005247237 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MTEMEG 7 MTEM+G Sbjct: 91 MTEMQG 96>XP_006713587 Length = 889 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MTEMEG 7 MTEM+G Sbjct: 292 MTEMQG 297>XP_005247233 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MTEMEG 7 MTEM+G Sbjct: 261 MTEMQG 266>XP_006713586 Length = 958 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MTEMEG 7 MTEM+G Sbjct: 292 MTEMQG 297Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.107 0.261 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 531,680 Number of extensions: 660 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |