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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_005274255                                                           17    3301
NP_055927                                                              16    7355
NP_057535                                                              16    7355
NP_001137534                                                           16    7355
NP_001137533                                                           16    7355
XP_005270716                                                           16    7355
XP_006710540                                                           16    7355
XP_006710539                                                           16    7355
XP_005270713                                                           16    7355
XP_005270712                                                           16    7355
XP_005270711                                                           16    7355
XP_005270710                                                           16    7355
XP_006710538                                                           16    7355
XP_005270709                                                           16    7355

>XP_005274255
          Length = 287

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 3   KKIMIMI 9
           KKIMIMI
Sbjct: 263 KKIMIMI 269



>NP_055927
          Length = 1798

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   MMKKIMIMI 9
           ++KK+MI+I
Sbjct: 412 LVKKLMIII 420



>NP_057535
          Length = 953

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  MKKIMIMI 9
          +KK++IMI
Sbjct: 42 LKKVIIMI 49



>NP_001137534
          Length = 953

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  MKKIMIMI 9
          +KK++IMI
Sbjct: 42 LKKVIIMI 49



>NP_001137533
          Length = 953

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  MKKIMIMI 9
          +KK++IMI
Sbjct: 42 LKKVIIMI 49



>XP_005270716
          Length = 1332

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   MMKKIMIMI 9
           ++KK+MI+I
Sbjct: 419 LVKKLMIII 427



>XP_006710540
          Length = 1655

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   MMKKIMIMI 9
           ++KK+MI+I
Sbjct: 269 LVKKLMIII 277



>XP_006710539
          Length = 1683

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   MMKKIMIMI 9
           ++KK+MI+I
Sbjct: 297 LVKKLMIII 305



>XP_005270713
          Length = 1711

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   MMKKIMIMI 9
           ++KK+MI+I
Sbjct: 325 LVKKLMIII 333



>XP_005270712
          Length = 1720

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   MMKKIMIMI 9
           ++KK+MI+I
Sbjct: 334 LVKKLMIII 342



>XP_005270711
          Length = 1797

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   MMKKIMIMI 9
           ++KK+MI+I
Sbjct: 412 LVKKLMIII 420



>XP_005270710
          Length = 1804

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   MMKKIMIMI 9
           ++KK+MI+I
Sbjct: 419 LVKKLMIII 427



>XP_006710538
          Length = 1804

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   MMKKIMIMI 9
           ++KK+MI+I
Sbjct: 418 LVKKLMIII 426



>XP_005270709
          Length = 1805

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   MMKKIMIMI 9
           ++KK+MI+I
Sbjct: 419 LVKKLMIII 427



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.362    0.154    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 239,859
Number of extensions: 209
Number of successful extensions: 14
Number of sequences better than 10000.0: 14
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 14
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (17.3 bits)
S2: 28 (15.4 bits)