Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 20 299 NP_000170 20 299 NP_001268422 20 299 NP_001268423 20 299 XP_005264328 20 299 NP_085135 18 1935 XP_005258413 18 1935 NP_001229277 17 3301 NP_006552 16 5631 NP_001274420 16 5631 NP_001092275 16 5631 NP_001012421 16 5631 NP_001012419 16 5631 XP_006726609 16 5631 XP_006719787 16 5631 XP_006717432 16 5631 XP_005272589 16 5631 XP_005272582 16 5631 XP_005272576 16 5631 XP_006712026 16 5631 XP_005264244 16 5631 XP_006710027 16 5631 NP_115626 16 5631 NP_065857 16 7355 NP_001019389 16 7355 NP_005871 16 7355 NP_001139 16 7355 NP_689785 16 7355 XP_006726566 16 7355 XP_005267311 16 7355 XP_005267310 16 7355 XP_005267307 16 7355 XP_006720066 16 7355 XP_006717411 16 7355 XP_006717028 16 7355 XP_006717027 16 7355 XP_005272226 16 7355 XP_006714257 16 7355 XP_005263002 16 7355 XP_005262999 16 7355 XP_006714252 16 7355 XP_006714251 16 7355 XP_006714250 16 7355 XP_006710279 16 7355 NP_065107 15 9605 NP_114172 15 9605 NP_065944 15 9605 NP_001137290 15 9605 NP_036442 15 9605 NP_002566 15 9605 NP_997205 15 9605 NP_001129735 15 9605 NP_443179 15 9605 XP_006722712 15 9605 XP_005266703 15 9605 XP_005253773 15 9605 XP_006711753 15 9605 NP_001092763 15 9605>NP_001268421 Length = 1230 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLVPDKISE 9 M+VPDKISE Sbjct: 669 MVVPDKISE 677>NP_000170 Length = 1360 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLVPDKISE 9 M+VPDKISE Sbjct: 799 MVVPDKISE 807>NP_001268422 Length = 1058 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLVPDKISE 9 M+VPDKISE Sbjct: 497 MVVPDKISE 505>NP_001268423 Length = 1058 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLVPDKISE 9 M+VPDKISE Sbjct: 497 MVVPDKISE 505>XP_005264328 Length = 1261 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLVPDKISE 9 M+VPDKISE Sbjct: 700 MVVPDKISE 708>NP_085135 Length = 2248 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVPDKISE 9 LVPDK++E Sbjct: 1564 LVPDKLNE 1571>XP_005258413 Length = 2249 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LVPDKISE 9 LVPDK++E Sbjct: 1565 LVPDKLNE 1572>NP_001229277 Length = 104 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LVPDKIS 8 LVPDK+S Sbjct: 44 LVPDKLS 50>NP_006552 Length = 521 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MLVPDKIS 8 +LVPD+I+ Sbjct: 19 LLVPDRIN 26>NP_001274420 Length = 1795 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVPDKIS 8 +VPDK+S Sbjct: 1467 IVPDKLS 1473>NP_001092275 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VPDKISE 9 VP+K+SE Sbjct: 301 VPEKVSE 307>NP_001012421 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VPDKISE 9 VP+K+SE Sbjct: 301 VPEKVSE 307>NP_001012419 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VPDKISE 9 VP+K+SE Sbjct: 301 VPEKVSE 307>XP_006726609 Length = 2838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MLVPDKISE 9 +L+P+KI+E Sbjct: 1273 ILLPEKINE 1281>XP_006719787 Length = 2838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MLVPDKISE 9 +L+P+KI+E Sbjct: 1273 ILLPEKINE 1281>XP_006717432 Length = 525 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MLVPDKIS 8 +LVPD+I+ Sbjct: 19 LLVPDRIN 26>XP_005272589 Length = 822 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VPDKISE 9 VP+K+SE Sbjct: 300 VPEKVSE 306>XP_005272582 Length = 822 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VPDKISE 9 VP+K+SE Sbjct: 300 VPEKVSE 306>XP_005272576 Length = 822 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VPDKISE 9 VP+K+SE Sbjct: 300 VPEKVSE 306>XP_006712026 Length = 937 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVPDKIS 8 +VPDK+S Sbjct: 609 IVPDKLS 615>XP_005264244 Length = 1795 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVPDKIS 8 +VPDK+S Sbjct: 1467 IVPDKLS 1473>XP_006710027 Length = 2837 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MLVPDKISE 9 +L+P+KI+E Sbjct: 1272 ILLPEKINE 1280>NP_115626 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VPDKISE 9 VP+K+SE Sbjct: 301 VPEKVSE 307>NP_065857 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPDKISE 9 +VPD+I E Sbjct: 58 IVPDEIEE 65>NP_001019389 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPDKISE 9 +VPD+I E Sbjct: 58 IVPDEIEE 65>NP_005871 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PDKISE 9 PDK+SE Sbjct: 345 PDKLSE 350>NP_001139 Length = 3957 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPDKISE 9 L+PD +SE Sbjct: 3181 LLPDDVSE 3188>NP_689785 Length = 479 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MLVPDKISE 9 ++VP+ ISE Sbjct: 204 LMVPEDISE 212>XP_006726566 Length = 963 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MLVPDKISE 9 +L+PD +SE Sbjct: 388 VLLPDPLSE 396>XP_005267311 Length = 755 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPDKISE 9 +VPD+I E Sbjct: 58 IVPDEIEE 65>XP_005267310 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPDKISE 9 +VPD+I E Sbjct: 58 IVPDEIEE 65>XP_005267307 Length = 788 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPDKISE 9 +VPD+I E Sbjct: 58 IVPDEIEE 65>XP_006720066 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPDKISE 9 +VPD+I E Sbjct: 58 IVPDEIEE 65>XP_006717411 Length = 963 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MLVPDKISE 9 +L+PD +SE Sbjct: 388 VLLPDPLSE 396>XP_006717028 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MLVPDKISE 9 ++VP+ ISE Sbjct: 132 LMVPEDISE 140>XP_006717027 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MLVPDKISE 9 ++VP+ ISE Sbjct: 159 LMVPEDISE 167>XP_005272226 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MLVPDKISE 9 ++VP+ ISE Sbjct: 216 LMVPEDISE 224>XP_006714257 Length = 4145 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPDKISE 9 L+PD +SE Sbjct: 3190 LLPDDVSE 3197>XP_005263002 Length = 4072 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPDKISE 9 L+PD +SE Sbjct: 3148 LLPDDVSE 3155>XP_005262999 Length = 4147 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPDKISE 9 L+PD +SE Sbjct: 3192 LLPDDVSE 3199>XP_006714252 Length = 4153 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPDKISE 9 L+PD +SE Sbjct: 3198 LLPDDVSE 3205>XP_006714251 Length = 4165 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPDKISE 9 L+PD +SE Sbjct: 3210 LLPDDVSE 3217>XP_006714250 Length = 4190 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPDKISE 9 L+PD +SE Sbjct: 3235 LLPDDVSE 3242>XP_006710279 Length = 963 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MLVPDKISE 9 +L+PD +SE Sbjct: 388 VLLPDPLSE 396>NP_065107 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LVPDKISE 9 LVP ISE Sbjct: 519 LVPQSISE 526>NP_114172 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MLVPDKISE 9 MLVP +SE Sbjct: 88 MLVPVPVSE 96>NP_065944 Length = 1701 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LVPDKIS 8 +VP+KIS Sbjct: 160 IVPEKIS 166>NP_001137290 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 MLVPDKISE 9 +L+PD+I++ Sbjct: 266 LLLPDEIAD 274>NP_036442 Length = 1232 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVPDKISE 9 LVP +ISE Sbjct: 19 LVPKEISE 26>NP_002566 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 MLVPDKISE 9 +L+PD+I++ Sbjct: 266 LLLPDEIAD 274>NP_997205 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MLVPDKISE 9 +L PD+I E Sbjct: 40 VLTPDRIPE 48>NP_001129735 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MLVPDKISE 9 +L PDKI + Sbjct: 41 VLTPDKIPD 49>NP_443179 Length = 2170 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 MLVPDKI 7 +++PDK+ Sbjct: 1266 LIIPDKV 1272>XP_006722712 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MLVPDKISE 9 +L PDKI + Sbjct: 41 VLTPDKIPD 49>XP_005266703 Length = 1501 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 MLVPDKI 7 +++PDK+ Sbjct: 597 LIIPDKV 603>XP_005253773 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LVPDKISE 9 LVP ISE Sbjct: 476 LVPQSISE 483>XP_006711753 Length = 1521 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 MLVPDKISE 9 + +PD +SE Sbjct: 14 LTIPDAVSE 22>NP_001092763 Length = 1234 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVPDKISE 9 LVP +ISE Sbjct: 19 LVPKEISE 26Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.135 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 645,591 Number of extensions: 694 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |