Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 21 229 NP_001087241 21 229 XP_006714101 21 229 XP_005265799 21 229 XP_005265798 21 229 XP_005265797 21 229 NP_277042 17 3301 NP_277043 17 3301 NP_000153 17 3301 NP_002903 17 3301 NP_001273361 17 3301 NP_001273360 17 3301 XP_006715607 17 3301 XP_006715606 17 3301 NP_060311 17 4312 NP_110407 17 4312 NP_848599 17 4312 XP_006713081 17 4312 NP_004954 16 5631 NP_001137481 16 5631 NP_001137482 16 5631 NP_001137480 16 5631 NP_001137475 16 5631 NP_001137477 16 5631 NP_001137478 16 5631 NP_001137476 16 5631 NP_115928 16 5631 XP_005262403 16 5631 XP_005262402 16 5631 XP_005262401 16 5631 XP_005262400 16 5631 XP_005262399 16 5631 NP_997005 16 7355 NP_036230 16 7355 NP_001171554 16 7355 NP_000392 16 7355 NP_071505 16 7355 NP_071320 16 7355 NP_003874 16 7355 XP_006717093 16 7355 XP_005264590 16 7355 XP_005264589 16 7355 XP_005264588 16 7355 XP_005264587 16 7355 XP_005264585 16 7355 XP_005264584 16 7355 XP_005264583 16 7355 XP_005264582 16 7355 XP_005264581 16 7355 NP_055527 15 9605 NP_006721 15 9605 NP_001009932 15 9605 NP_001009933 15 9605 NP_001009934 15 9605 NP_000664 15 9605 NP_001159976 15 9605 NP_001171953 15 9605 NP_000967 15 9605 NP_001431 15 9605 XP_005277886 15 9605 XP_006724302 15 9605 XP_006721170 15 9605 XP_006721169 15 9605 XP_005255780 15 9605 XP_006716365 15 9605 NP_037505 15 9605>NP_000213 Length = 976 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLTYDRLVN 9 +LTYDRLVN Sbjct: 415 ILTYDRLVN 423>NP_001087241 Length = 972 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLTYDRLVN 9 +LTYDRLVN Sbjct: 415 ILTYDRLVN 423>XP_006714101 Length = 526 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLTYDRLVN 9 +LTYDRLVN Sbjct: 416 ILTYDRLVN 424>XP_005265799 Length = 973 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLTYDRLVN 9 +LTYDRLVN Sbjct: 416 ILTYDRLVN 424>XP_005265798 Length = 976 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLTYDRLVN 9 +LTYDRLVN Sbjct: 416 ILTYDRLVN 424>XP_005265797 Length = 977 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLTYDRLVN 9 +LTYDRLVN Sbjct: 416 ILTYDRLVN 424>NP_277042 Length = 466 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MLTYDRLVN 9 +L YDRLV+ Sbjct: 271 LLEYDRLVD 279>NP_277043 Length = 464 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MLTYDRLVN 9 +L YDRLV+ Sbjct: 269 LLEYDRLVD 277>NP_000153 Length = 465 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MLTYDRLVN 9 +L YDRLV+ Sbjct: 270 LLEYDRLVD 278>NP_002903 Length = 3130 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 MLTYDR 6 MLTYDR Sbjct: 2934 MLTYDR 2939>NP_001273361 Length = 3052 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 MLTYDR 6 MLTYDR Sbjct: 2856 MLTYDR 2861>NP_001273360 Length = 3052 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 MLTYDR 6 MLTYDR Sbjct: 2856 MLTYDR 2861>XP_006715607 Length = 3052 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 MLTYDR 6 MLTYDR Sbjct: 2856 MLTYDR 2861>XP_006715606 Length = 3130 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 MLTYDR 6 MLTYDR Sbjct: 2934 MLTYDR 2939>NP_060311 Length = 166 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 YDRLVN 9 YDRL+N Sbjct: 105 YDRLIN 110>NP_110407 Length = 315 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MLTYDRLVN 9 ML YD +VN Sbjct: 149 MLQYDAVVN 157>NP_848599 Length = 3092 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 YDRLVN 9 YDRL+N Sbjct: 2132 YDRLIN 2137>XP_006713081 Length = 3964 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 YDRLVN 9 YDRL+N Sbjct: 2155 YDRLIN 2160>NP_004954 Length = 1073 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MLTYDRLVN 9 +LTYD VN Sbjct: 394 LLTYDTHVN 402>NP_001137481 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 LT+D L+N Sbjct: 465 LTFDALIN 472>NP_001137482 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 LT+D L+N Sbjct: 465 LTFDALIN 472>NP_001137480 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 LT+D L+N Sbjct: 465 LTFDALIN 472>NP_001137475 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 LT+D L+N Sbjct: 465 LTFDALIN 472>NP_001137477 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 LT+D L+N Sbjct: 465 LTFDALIN 472>NP_001137478 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 LT+D L+N Sbjct: 465 LTFDALIN 472>NP_001137476 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 LT+D L+N Sbjct: 465 LTFDALIN 472>NP_115928 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 LT+D L+N Sbjct: 465 LTFDALIN 472>XP_005262403 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 LT+D L+N Sbjct: 465 LTFDALIN 472>XP_005262402 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 LT+D L+N Sbjct: 465 LTFDALIN 472>XP_005262401 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 LT+D L+N Sbjct: 465 LTFDALIN 472>XP_005262400 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 LT+D L+N Sbjct: 465 LTFDALIN 472>XP_005262399 Length = 845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 LT+D L+N Sbjct: 465 LTFDALIN 472>NP_997005 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MLTYDRL 7 +LTYDR+ Sbjct: 460 VLTYDRV 466>NP_036230 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TYDRLVN 9 TY+R++N Sbjct: 229 TYNRIIN 235>NP_001171554 Length = 728 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MLTYDRL 7 +LTYDR+ Sbjct: 470 VLTYDRV 476>NP_000392 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MLTYDRL 7 +LTYDR+ Sbjct: 493 VLTYDRV 499>NP_071505 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 L+YD +VN Sbjct: 200 LSYDEVVN 207>NP_071320 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 L+YD +VN Sbjct: 189 LSYDEVVN 196>NP_003874 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MLTYDR 6 +LTYDR Sbjct: 384 LLTYDR 389>XP_006717093 Length = 274 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TYDRLVN 9 TY+R++N Sbjct: 229 TYNRIIN 235>XP_005264590 Length = 246 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 L+YD +VN Sbjct: 60 LSYDEVVN 67>XP_005264589 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 L+YD +VN Sbjct: 99 LSYDEVVN 106>XP_005264588 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 L+YD +VN Sbjct: 99 LSYDEVVN 106>XP_005264587 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 L+YD +VN Sbjct: 99 LSYDEVVN 106>XP_005264585 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 L+YD +VN Sbjct: 135 LSYDEVVN 142>XP_005264584 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 L+YD +VN Sbjct: 189 LSYDEVVN 196>XP_005264583 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 L+YD +VN Sbjct: 191 LSYDEVVN 198>XP_005264582 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 L+YD +VN Sbjct: 202 LSYDEVVN 209>XP_005264581 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 L+YD +VN Sbjct: 202 LSYDEVVN 209>NP_055527 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTYDRLV 8 LTY+RL+ Sbjct: 1445 LTYERLL 1451>NP_006721 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TYDRLV 8 TYDR+V Sbjct: 225 TYDRVV 230>NP_001009932 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TYDRLV 8 TYDR+V Sbjct: 225 TYDRVV 230>NP_001009933 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TYDRLV 8 TYDR+V Sbjct: 225 TYDRVV 230>NP_001009934 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TYDRLV 8 TYDR+V Sbjct: 225 TYDRVV 230>NP_000664 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MLTYDRLV 8 MLTYD ++ Sbjct: 312 MLTYDPML 319>NP_001159976 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MLTYDRLV 8 MLTYD ++ Sbjct: 320 MLTYDPML 327>NP_001171953 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 L+YD L+N Sbjct: 477 LSYDSLLN 484>NP_000967 Length = 165 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 +T+D +VN Sbjct: 104 ITFDEIVN 111>NP_001431 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MLTYDR 6 MLTY+R Sbjct: 667 MLTYER 672>XP_005277886 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TYDRLV 8 TYDR+V Sbjct: 225 TYDRVV 230>XP_006724302 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 L+YD L+N Sbjct: 477 LSYDSLLN 484>XP_006721170 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTYDRLV 8 LTY+RL+ Sbjct: 1445 LTYERLL 1451>XP_006721169 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTYDRLV 8 LTY+RL+ Sbjct: 1445 LTYERLL 1451>XP_005255780 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LTYDRLV 8 LTY+RL+ Sbjct: 1445 LTYERLL 1451>XP_006716365 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MLTYDR 6 MLTY+R Sbjct: 667 MLTYER 672>NP_037505 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LTYDRLVN 9 L+YD L+N Sbjct: 477 LSYDSLLN 484Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.143 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 449,943 Number of extensions: 667 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |