Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 19 869 XP_006716142 19 869 XP_005250088 19 869 XP_006716141 19 869 XP_005250085 19 869 XP_006716140 19 869 XP_005250084 19 869 XP_005250083 19 869 XP_005250082 19 869 NP_937839 18 1935 XP_005247120 18 1935 XP_006713533 18 1935 XP_006713532 18 1935 NP_005807 18 1935 NP_002378 17 3301 NP_001078846 17 3301 XP_005272048 17 3301 XP_006714680 17 3301 NP_115804 17 4312 NP_001009811 17 4312 NP_055799 17 4312 XP_006724772 17 4312 XP_005257233 17 4312 XP_005257231 17 4312 NP_775871 16 5631 NP_001269836 16 7355 NP_001269837 16 7355 NP_001269838 16 7355 NP_006576 16 7355 NP_116321 16 7355 XP_005258102 16 7355 NP_065816 15 9605 NP_061728 15 9605 NP_113683 15 9605 XP_006710573 15 9605 XP_006710572 15 9605 XP_006710571 15 9605 XP_006710570 15 9605 XP_006710569 15 9605 XP_006710568 15 9605 XP_006710567 15 9605 XP_006710566 15 9605 XP_005245859 15 9605 NP_113684 15 9605>NP_733751 Length = 4911 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLGSEISSS 9 M+GSEISSS Sbjct: 3436 MVGSEISSS 3444>XP_006716142 Length = 4927 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLGSEISSS 9 M+GSEISSS Sbjct: 3453 MVGSEISSS 3461>XP_005250088 Length = 4928 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLGSEISSS 9 M+GSEISSS Sbjct: 3453 MVGSEISSS 3461>XP_006716141 Length = 4959 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLGSEISSS 9 M+GSEISSS Sbjct: 3453 MVGSEISSS 3461>XP_005250085 Length = 4979 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLGSEISSS 9 M+GSEISSS Sbjct: 3453 MVGSEISSS 3461>XP_006716140 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLGSEISSS 9 M+GSEISSS Sbjct: 3453 MVGSEISSS 3461>XP_005250084 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLGSEISSS 9 M+GSEISSS Sbjct: 3453 MVGSEISSS 3461>XP_005250083 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLGSEISSS 9 M+GSEISSS Sbjct: 3452 MVGSEISSS 3460>XP_005250082 Length = 4983 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 MLGSEISSS 9 M+GSEISSS Sbjct: 3453 MVGSEISSS 3461>NP_937839 Length = 585 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 MLGSEISSS 9 +LGSEISS+ Sbjct: 377 LLGSEISST 385>XP_005247120 Length = 419 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 MLGSEISSS 9 +LGSEISS+ Sbjct: 377 LLGSEISST 385>XP_006713533 Length = 568 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 MLGSEISSS 9 +LGSEISS+ Sbjct: 361 LLGSEISST 369>XP_006713532 Length = 584 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 MLGSEISSS 9 +LGSEISS+ Sbjct: 377 LLGSEISST 385>NP_005807 Length = 569 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 MLGSEISSS 9 +LGSEISS+ Sbjct: 361 LLGSEISST 369>NP_002378 Length = 829 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 MLGSEISS 8 +LGSEISS Sbjct: 346 VLGSEISS 353>NP_001078846 Length = 1019 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 MLGSEISS 8 +LGSEISS Sbjct: 536 VLGSEISS 543>XP_005272048 Length = 851 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 MLGSEISS 8 +LGSEISS Sbjct: 346 VLGSEISS 353>XP_006714680 Length = 1002 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 MLGSEISS 8 +LGSEISS Sbjct: 497 VLGSEISS 504>NP_115804 Length = 1810 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LGSEISSS 9 LG+E+SSS Sbjct: 1059 LGAEVSSS 1066>NP_001009811 Length = 1044 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LGSEISSS 9 LGSE+S+S Sbjct: 562 LGSEVSTS 569>NP_055799 Length = 1080 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LGSEISSS 9 LGSE+S+S Sbjct: 562 LGSEVSTS 569>XP_006724772 Length = 1605 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LGSEISSS 9 LG+E+SSS Sbjct: 854 LGAEVSSS 861>XP_005257233 Length = 1046 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LGSEISSS 9 LGSE+S+S Sbjct: 562 LGSEVSTS 569>XP_005257231 Length = 1080 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LGSEISSS 9 LGSE+S+S Sbjct: 562 LGSEVSTS 569>NP_775871 Length = 8384 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LGSEISSS 9 LGS++SSS Sbjct: 7791 LGSQLSSS 7798>NP_001269836 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MLGSEISSS 9 +LGS ISSS Sbjct: 188 ILGSGISSS 196>NP_001269837 Length = 497 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MLGSEISSS 9 +LGS ISSS Sbjct: 156 ILGSGISSS 164>NP_001269838 Length = 475 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MLGSEISSS 9 +LGS ISSS Sbjct: 134 ILGSGISSS 142>NP_006576 Length = 548 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MLGSEISSS 9 +LGS ISSS Sbjct: 207 ILGSGISSS 215>NP_116321 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGSEISSS 9 LGS +SSS Sbjct: 246 LGSSVSSS 253>XP_005258102 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGSEISSS 9 LGS +SSS Sbjct: 216 LGSSVSSS 223>NP_065816 Length = 5183 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MLGSEISSS 9 M+G ISSS Sbjct: 387 MIGQAISSS 395>NP_061728 Length = 948 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGSEISSS 9 LGS++SS+ Sbjct: 281 LGSDVSST 288>NP_113683 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGSEISSS 9 LGS++SS+ Sbjct: 281 LGSDVSST 288>XP_006710573 Length = 5177 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MLGSEISSS 9 M+G ISSS Sbjct: 387 MIGQAISSS 395>XP_006710572 Length = 5188 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MLGSEISSS 9 M+G ISSS Sbjct: 387 MIGQAISSS 395>XP_006710571 Length = 5194 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MLGSEISSS 9 M+G ISSS Sbjct: 387 MIGQAISSS 395>XP_006710570 Length = 5195 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MLGSEISSS 9 M+G ISSS Sbjct: 387 MIGQAISSS 395>XP_006710569 Length = 5212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MLGSEISSS 9 M+G ISSS Sbjct: 387 MIGQAISSS 395>XP_006710568 Length = 5221 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MLGSEISSS 9 M+G ISSS Sbjct: 387 MIGQAISSS 395>XP_006710567 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MLGSEISSS 9 M+G ISSS Sbjct: 387 MIGQAISSS 395>XP_006710566 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MLGSEISSS 9 M+G ISSS Sbjct: 387 MIGQAISSS 395>XP_005245859 Length = 5223 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MLGSEISSS 9 M+G ISSS Sbjct: 387 MIGQAISSS 395>NP_113684 Length = 808 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGSEISSS 9 LGS++SS+ Sbjct: 281 LGSDVSST 288Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.292 0.109 0.241 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 513,863 Number of extensions: 764 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |