Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_444256                                                              20     509
NP_444254                                                              20     509
NP_444253                                                              20     509
NP_444255                                                              20     509
XP_005247551                                                           20     509
XP_005247550                                                           20     509
XP_006713712                                                           20     509
XP_005247549                                                           20     509
NP_001098675                                                           17    2528
NP_001098674                                                           17    2528
NP_001265156                                                           17    2528
NP_001265159                                                           17    2528
NP_055143                                                              17    2528
NP_001265157                                                           17    2528
NP_001265158                                                           17    2528
XP_006711321                                                           17    2528
XP_006711320                                                           17    2528
XP_006711319                                                           17    2528
XP_006711318                                                           17    2528
XP_006711317                                                           17    2528
NP_001098673                                                           17    2528
NP_852606                                                              17    4312
NP_001229393                                                           17    4312
NP_115568                                                              17    4312
XP_006722200                                                           17    4312
NP_036363                                                              16    5631
NP_001007258                                                           16    5631
NP_056950                                                              16    5631
NP_001243625                                                           16    5631
NP_036234                                                              16    5631
NP_001036146                                                           16    5631
NP_001243624                                                           16    5631
XP_005246055                                                           16    5631
XP_006710943                                                           16    5631
XP_006710942                                                           16    5631
XP_006710941                                                           16    5631
XP_005246054                                                           16    5631
XP_005246053                                                           16    5631
XP_006710940                                                           16    5631
XP_005246052                                                           16    5631
XP_005246051                                                           16    5631
XP_005246050                                                           16    5631
XP_005246049                                                           16    5631
XP_005263522                                                           16    5631
XP_006710716                                                           16    5631
XP_005263521                                                           16    5631
NP_001010893                                                           16    5631
NP_001078921                                                           16    7355
NP_056482                                                              16    7355
NP_001265097                                                           16    7355
NP_057492                                                              16    7355
NP_001265098                                                           16    7355
NP_001265096                                                           16    7355
NP_057166                                                              16    7355
NP_612504                                                              16    7355
NP_079527                                                              16    7355
NP_065776                                                              16    7355
NP_057608                                                              16    7355
NP_001107013                                                           16    7355
XP_006726482                                                           16    7355
XP_006726450                                                           16    7355
XP_006721116                                                           16    7355
XP_005255419                                                           16    7355
XP_005255418                                                           16    7355
XP_006716914                                                           16    7355
XP_006716724                                                           16    7355
XP_005272401                                                           16    7355
XP_005250278                                                           16    7355
XP_006715967                                                           16    7355
XP_006715966                                                           16    7355
XP_005250277                                                           16    7355
XP_006715965                                                           16    7355
XP_005250276                                                           16    7355
XP_006715964                                                           16    7355
XP_006715963                                                           16    7355
XP_006714574                                                           16    7355
XP_006712223                                                           16    7355
XP_006710229                                                           16    7355
XP_006710190                                                           16    7355
NP_001138668                                                           16    7355
NP_077719                                                              15    9605
NP_056385                                                              15    9605
NP_001120703                                                           15    9605
NP_001140174                                                           15    9605
NP_004178                                                              15    9605
NP_001269551                                                           15    9605
NP_689916                                                              15    9605
NP_001036068                                                           15    9605
NP_001248364                                                           15    9605
NP_899068                                                              15    9605
NP_055240                                                              15    9605
NP_001140177                                                           15    9605
NP_631897                                                              15    9605
NP_001092264                                                           15    9605
NP_115503                                                              15    9605
NP_004678                                                              15    9605
NP_004644                                                              15    9605
NP_078812                                                              15    9605
NP_001140178                                                           15    9605
NP_775782                                                              15    9605
NP_001248365                                                           15    9605
XP_005262618                                                           15    9605
XP_005262617                                                           15    9605
XP_006724672                                                           15    9605
XP_005262092                                                           15    9605
XP_006722231                                                           15    9605
XP_005257843                                                           15    9605
XP_005257842                                                           15    9605
XP_005257841                                                           15    9605
XP_006718406                                                           15    9605
XP_006718405                                                           15    9605
XP_005251981                                                           15    9605
XP_005251980                                                           15    9605
XP_005250885                                                           15    9605
XP_005250618                                                           15    9605
XP_005250617                                                           15    9605
XP_005250314                                                           15    9605
XP_006715953                                                           15    9605
XP_006715952                                                           15    9605
XP_005250250                                                           15    9605
XP_006715951                                                           15    9605
XP_005250248                                                           15    9605
XP_006712760                                                           15    9605
XP_005246840                                                           15    9605
XP_005246839                                                           15    9605
XP_006712759                                                           15    9605
XP_005246838                                                           15    9605
XP_005270959                                                           15    9605
XP_005270958                                                           15    9605
XP_006710730                                                           15    9605
NP_003369                                                              15    9605
>NP_444256
          Length = 1794

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    MKSRRPNSS 9
            MKSRRP SS
Sbjct: 1132 MKSRRPKSS 1140
>NP_444254
          Length = 1845

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    MKSRRPNSS 9
            MKSRRP SS
Sbjct: 1132 MKSRRPKSS 1140
>NP_444253
          Length = 1914

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    MKSRRPNSS 9
            MKSRRP SS
Sbjct: 1201 MKSRRPKSS 1209
>NP_444255
          Length = 1863

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    MKSRRPNSS 9
            MKSRRP SS
Sbjct: 1201 MKSRRPKSS 1209
>XP_005247551
          Length = 1855

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    MKSRRPNSS 9
            MKSRRP SS
Sbjct: 1142 MKSRRPKSS 1150
>XP_005247550
          Length = 1856

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    MKSRRPNSS 9
            MKSRRP SS
Sbjct: 1211 MKSRRPKSS 1219
>XP_006713712
          Length = 1923

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    MKSRRPNSS 9
            MKSRRP SS
Sbjct: 1211 MKSRRPKSS 1219
>XP_005247549
          Length = 1924

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    MKSRRPNSS 9
            MKSRRP SS
Sbjct: 1211 MKSRRPKSS 1219
>NP_001098675
          Length = 492

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           +KSRRP+S
Sbjct: 392 LKSRRPSS 399
>NP_001098674
          Length = 796

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           +KSRRP+S
Sbjct: 696 LKSRRPSS 703
>NP_001265156
          Length = 400

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           +KSRRP+S
Sbjct: 300 LKSRRPSS 307
>NP_001265159
          Length = 433

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           +KSRRP+S
Sbjct: 333 LKSRRPSS 340
>NP_055143
          Length = 433

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           +KSRRP+S
Sbjct: 333 LKSRRPSS 340
>NP_001265157
          Length = 427

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           +KSRRP+S
Sbjct: 327 LKSRRPSS 334
>NP_001265158
          Length = 327

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           +KSRRP+S
Sbjct: 227 LKSRRPSS 234
>XP_006711321
          Length = 433

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           +KSRRP+S
Sbjct: 333 LKSRRPSS 340
>XP_006711320
          Length = 433

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           +KSRRP+S
Sbjct: 333 LKSRRPSS 340
>XP_006711319
          Length = 933

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           +KSRRP+S
Sbjct: 833 LKSRRPSS 840
>XP_006711318
          Length = 1039

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           +KSRRP+S
Sbjct: 939 LKSRRPSS 946
>XP_006711317
          Length = 1039

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           +KSRRP+S
Sbjct: 939 LKSRRPSS 946
>NP_001098673
          Length = 902

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           +KSRRP+S
Sbjct: 802 LKSRRPSS 809
>NP_852606
          Length = 168

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  MKSRRPN 7
          +KS+RPN
Sbjct: 28 LKSKRPN 34
>NP_001229393
          Length = 168

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  MKSRRPN 7
          +KS+RPN
Sbjct: 28 LKSKRPN 34
>NP_115568
          Length = 204

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  MKSRRPN 7
          +KS+RPN
Sbjct: 64 LKSKRPN 70
>XP_006722200
          Length = 204

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  MKSRRPN 7
          +KS+RPN
Sbjct: 64 LKSKRPN 70
>NP_036363
          Length = 1718

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1    MKSRRPNSS 9
            +KS++P+SS
Sbjct: 1563 VKSKKPSSS 1571
>NP_001007258
          Length = 1481

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1    MKSRRPNSS 9
            +KS++P+SS
Sbjct: 1362 VKSKKPSSS 1370
>NP_056950
          Length = 1682

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1    MKSRRPNSS 9
            +KS++P+SS
Sbjct: 1563 VKSKKPSSS 1571
>NP_001243625
          Length = 477

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  SRRPNSS 9
          SRRP+SS
Sbjct: 41 SRRPDSS 47
>NP_036234
          Length = 1566

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           ++SRRPN+
Sbjct: 113 IESRRPNT 120
>NP_001036146
          Length = 1566

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           ++SRRPN+
Sbjct: 113 IESRRPNT 120
>NP_001243624
          Length = 1177

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  SRRPNSS 9
          SRRP+SS
Sbjct: 41 SRRPDSS 47
>XP_005246055
          Length = 1481

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1    MKSRRPNSS 9
            +KS++P+SS
Sbjct: 1362 VKSKKPSSS 1370
>XP_006710943
          Length = 1517

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1    MKSRRPNSS 9
            +KS++P+SS
Sbjct: 1362 VKSKKPSSS 1370
>XP_006710942
          Length = 1517

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1    MKSRRPNSS 9
            +KS++P+SS
Sbjct: 1362 VKSKKPSSS 1370
>XP_006710941
          Length = 1517

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1    MKSRRPNSS 9
            +KS++P+SS
Sbjct: 1362 VKSKKPSSS 1370
>XP_005246054
          Length = 1517

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1    MKSRRPNSS 9
            +KS++P+SS
Sbjct: 1362 VKSKKPSSS 1370
>XP_005246053
          Length = 1644

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1    MKSRRPNSS 9
            +KS++P+SS
Sbjct: 1489 VKSKKPSSS 1497
>XP_006710940
          Length = 1682

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1    MKSRRPNSS 9
            +KS++P+SS
Sbjct: 1563 VKSKKPSSS 1571
>XP_005246052
          Length = 1692

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1    MKSRRPNSS 9
            +KS++P+SS
Sbjct: 1573 VKSKKPSSS 1581
>XP_005246051
          Length = 1717

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1    MKSRRPNSS 9
            +KS++P+SS
Sbjct: 1562 VKSKKPSSS 1570
>XP_005246050
          Length = 1718

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1    MKSRRPNSS 9
            +KS++P+SS
Sbjct: 1563 VKSKKPSSS 1571
>XP_005246049
          Length = 1728

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1    MKSRRPNSS 9
            +KS++P+SS
Sbjct: 1573 VKSKKPSSS 1581
>XP_005263522
          Length = 1524

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           ++SRRPN+
Sbjct: 113 IESRRPNT 120
>XP_006710716
          Length = 1566

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           ++SRRPN+
Sbjct: 113 IESRRPNT 120
>XP_005263521
          Length = 1566

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           ++SRRPN+
Sbjct: 113 IESRRPNT 120
>NP_001010893
          Length = 438

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  KSRRPNSS 9
          +++RPNSS
Sbjct: 51 ENKRPNSS 58
>NP_001078921
          Length = 1361

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    KSRRPN 7
            KSR+PN
Sbjct: 1126 KSRKPN 1131
>NP_056482
          Length = 1347

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    KSRRPN 7
            KSR+PN
Sbjct: 1112 KSRKPN 1117
>NP_001265097
          Length = 510

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   MKSRRPNS 8
           +K+RRP S
Sbjct: 165 LKTRRPRS 172
>NP_057492
          Length = 587

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   MKSRRPNS 8
           +K+RRP S
Sbjct: 165 LKTRRPRS 172
>NP_001265098
          Length = 560

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   MKSRRPNS 8
           +K+RRP S
Sbjct: 138 LKTRRPRS 145
>NP_001265096
          Length = 586

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   MKSRRPNS 8
           +K+RRP S
Sbjct: 165 LKTRRPRS 172
>NP_057166
          Length = 588

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   MKSRRPNS 8
           +K+RRP S
Sbjct: 166 LKTRRPRS 173
>NP_612504
          Length = 738

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   KSRRPNS 8
           KSR PNS
Sbjct: 267 KSRPPNS 273
>NP_079527
          Length = 1114

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   MKSRRPNSS 9
           ++SRRP+ S
Sbjct: 240 VRSRRPSGS 248
>NP_065776
          Length = 861

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   KSRRPNS 8
           KSR PNS
Sbjct: 391 KSRPPNS 397
>NP_057608
          Length = 474

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           ++SRRP+S
Sbjct: 112 LESRRPSS 119
>NP_001107013
          Length = 1347

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    KSRRPN 7
            KSR+PN
Sbjct: 1112 KSRKPN 1117
>XP_006726482
          Length = 232

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   KSRRPN 7
           +SRRPN
Sbjct: 119 RSRRPN 124
>XP_006726450
          Length = 661

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1 MKSRRPNS 8
         MK+RRP +
Sbjct: 1 MKNRRPGT 8
>XP_006721116
          Length = 413

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  MKSRRPNS 8
          ++SRRP+S
Sbjct: 51 LESRRPSS 58
>XP_005255419
          Length = 413

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  MKSRRPNS 8
          ++SRRP+S
Sbjct: 51 LESRRPSS 58
>XP_005255418
          Length = 453

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   MKSRRPNS 8
           ++SRRP+S
Sbjct: 112 LESRRPSS 119
>XP_006716914
          Length = 848

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   KSRRPN 7
           KSR+PN
Sbjct: 613 KSRKPN 618
>XP_006716724
          Length = 970

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   MKSRRPNSS 9
           ++SRRP+ S
Sbjct: 96  VRSRRPSGS 104
>XP_005272401
          Length = 1083

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   MKSRRPNSS 9
           ++SRRP+ S
Sbjct: 240 VRSRRPSGS 248
>XP_005250278
          Length = 657

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   KSRRPNS 8
           KSR PNS
Sbjct: 175 KSRPPNS 181
>XP_006715967
          Length = 674

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  KSRRPNS 8
          KSR PNS
Sbjct: 90 KSRPPNS 96
>XP_006715966
          Length = 856

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   KSRRPNS 8
           KSR PNS
Sbjct: 391 KSRPPNS 397
>XP_005250277
          Length = 862

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   KSRRPNS 8
           KSR PNS
Sbjct: 391 KSRPPNS 397
>XP_006715965
          Length = 872

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   KSRRPNS 8
           KSR PNS
Sbjct: 391 KSRPPNS 397
>XP_005250276
          Length = 873

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   KSRRPNS 8
           KSR PNS
Sbjct: 391 KSRPPNS 397
>XP_006715964
          Length = 964

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   KSRRPNS 8
           KSR PNS
Sbjct: 391 KSRPPNS 397
>XP_006715963
          Length = 975

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   KSRRPNS 8
           KSR PNS
Sbjct: 391 KSRPPNS 397
>XP_006714574
          Length = 232

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   KSRRPN 7
           +SRRPN
Sbjct: 119 RSRRPN 124
>XP_006712223
          Length = 661

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1 MKSRRPNS 8
         MK+RRP +
Sbjct: 1 MKNRRPGT 8
>XP_006710229
          Length = 232

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   KSRRPN 7
           +SRRPN
Sbjct: 119 RSRRPN 124
>XP_006710190
          Length = 603

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1 MKSRRPNS 8
         MK+RRP +
Sbjct: 1 MKNRRPGT 8
>NP_001138668
          Length = 1343

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    KSRRPN 7
            KSR+PN
Sbjct: 1108 KSRKPN 1113
>NP_077719
          Length = 2471

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    KSRRPNS 8
            KSRRP++
Sbjct: 2102 KSRRPSA 2108
>NP_056385
          Length = 1259

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   MKSRRPNSS 9
           ++S RPNS+
Sbjct: 949 VESARPNST 957
>NP_001120703
          Length = 1235

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   MKSRRPNSS 9
           ++S RPNS+
Sbjct: 925 VESARPNST 933
>NP_001140174
          Length = 1379

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    MKSRRP 6
            M+SRRP
Sbjct: 1181 MRSRRP 1186
>NP_004178
          Length = 1560

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    MKSRRP 6
            M+SRRP
Sbjct: 1248 MRSRRP 1253
>NP_001269551
          Length = 1559

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    MKSRRP 6
            M+SRRP
Sbjct: 1247 MRSRRP 1252
>NP_689916
          Length = 1584

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   MKSRRPNSS 9
           M+SR P+ S
Sbjct: 840 MRSRNPDES 848
>NP_001036068
          Length = 1690

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    MKSRRP 6
            M+SRRP
Sbjct: 1216 MRSRRP 1221
>NP_001248364
          Length = 429

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  KSRRPNSS 9
          KS+RP S+
Sbjct: 69 KSKRPRSN 76
>NP_899068
          Length = 895

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   SRRPNSS 9
           SRRPN +
Sbjct: 685 SRRPNET 691
>NP_055240
          Length = 1065

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   SRRPNSS 9
           SRRPN +
Sbjct: 685 SRRPNET 691
>NP_001140177
          Length = 1570

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    MKSRRP 6
            M+SRRP
Sbjct: 1266 MRSRRP 1271
>NP_631897
          Length = 384

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  KSRRPNSS 9
          KS+RP S+
Sbjct: 18 KSKRPRSN 25
>NP_001092264
          Length = 972

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   MKSRRPN 7
           +KSRRP+
Sbjct: 853 VKSRRPS 859
>NP_115503
          Length = 986

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   MKSRRPN 7
           +KSRRP+
Sbjct: 867 VKSRRPS 873
>NP_004678
          Length = 1195

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   SRRPNS 8
           S+RPNS
Sbjct: 934 SKRPNS 939
>NP_004644
          Length = 1539

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    MKSRRP 6
            M+SRRP
Sbjct: 1235 MRSRRP 1240
>NP_078812
          Length = 775

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  SRRPNS 8
          +RRPNS
Sbjct: 59 ARRPNS 64
>NP_001140178
          Length = 1482

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    MKSRRP 6
            M+SRRP
Sbjct: 1178 MRSRRP 1183
>NP_775782
          Length = 589

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   KSRRPNSS 9
           K+R+P+SS
Sbjct: 203 KTRQPSSS 210
>NP_001248365
          Length = 400

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  KSRRPNSS 9
          KS+RP S+
Sbjct: 69 KSKRPRSN 76
>XP_005262618
          Length = 1462

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    MKSRRP 6
            M+SRRP
Sbjct: 1158 MRSRRP 1163
>XP_005262617
          Length = 1494

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    MKSRRP 6
            M+SRRP
Sbjct: 1190 MRSRRP 1195
>XP_006724672
          Length = 1446

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    MKSRRP 6
            M+SRRP
Sbjct: 1248 MRSRRP 1253
>XP_005262092
          Length = 1557

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    MKSRRP 6
            M+SRRP
Sbjct: 1248 MRSRRP 1253
>XP_006722231
          Length = 1195

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   SRRPNS 8
           S+RPNS
Sbjct: 934 SKRPNS 939
>XP_005257843
          Length = 1195

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   SRRPNS 8
           S+RPNS
Sbjct: 934 SKRPNS 939
>XP_005257842
          Length = 1199

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   SRRPNS 8
           S+RPNS
Sbjct: 938 SKRPNS 943
>XP_005257841
          Length = 1209

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   SRRPNS 8
           S+RPNS
Sbjct: 948 SKRPNS 953
>XP_006718406
          Length = 986

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   MKSRRPN 7
           +KSRRP+
Sbjct: 867 VKSRRPS 873
>XP_006718405
          Length = 986

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   MKSRRPN 7
           +KSRRP+
Sbjct: 867 VKSRRPS 873
>XP_005251981
          Length = 988

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   SRRPNSS 9
           SRRPN +
Sbjct: 589 SRRPNET 595
>XP_005251980
          Length = 1084

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   SRRPNSS 9
           SRRPN +
Sbjct: 685 SRRPNET 691
>XP_005250885
          Length = 878

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KSRRPNSS 9
           K+R+PN S
Sbjct: 564 KTRKPNFS 571
>XP_005250618
          Length = 615

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KSRRPNSS 9
           K+RRP S+
Sbjct: 278 KARRPESA 285
>XP_005250617
          Length = 615

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KSRRPNSS 9
           K+RRP S+
Sbjct: 278 KARRPESA 285
>XP_005250314
          Length = 808

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   MKSRRPNSS 9
           ++S RPNS+
Sbjct: 498 VESARPNST 506
>XP_006715953
          Length = 1584

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   MKSRRPNSS 9
           M+SR P+ S
Sbjct: 840 MRSRNPDES 848
>XP_006715952
          Length = 1584

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   MKSRRPNSS 9
           M+SR P+ S
Sbjct: 840 MRSRNPDES 848
>XP_005250250
          Length = 1584

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   MKSRRPNSS 9
           M+SR P+ S
Sbjct: 840 MRSRNPDES 848
>XP_006715951
          Length = 1584

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   MKSRRPNSS 9
           M+SR P+ S
Sbjct: 840 MRSRNPDES 848
>XP_005250248
          Length = 1584

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   MKSRRPNSS 9
           M+SR P+ S
Sbjct: 840 MRSRNPDES 848
>XP_006712760
          Length = 283

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  KSRRPNSS 9
          KS+RP S+
Sbjct: 69 KSKRPRSN 76
>XP_005246840
          Length = 345

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  KSRRPNSS 9
          KS+RP S+
Sbjct: 69 KSKRPRSN 76
>XP_005246839
          Length = 384

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  KSRRPNSS 9
          KS+RP S+
Sbjct: 18 KSKRPRSN 25
>XP_006712759
          Length = 435

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  KSRRPNSS 9
          KS+RP S+
Sbjct: 69 KSKRPRSN 76
>XP_005246838
          Length = 435

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  KSRRPNSS 9
          KS+RP S+
Sbjct: 69 KSKRPRSN 76
>XP_005270959
          Length = 2432

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    KSRRPNS 8
            KSRRP++
Sbjct: 2063 KSRRPSA 2069
>XP_005270958
          Length = 2432

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    KSRRPNS 8
            KSRRP++
Sbjct: 2063 KSRRPSA 2069
>XP_006710730
          Length = 2432

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    KSRRPNS 8
            KSRRP++
Sbjct: 2063 KSRRPSA 2069
>NP_003369
          Length = 615

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   KSRRPNSS 9
           K+RRP S+
Sbjct: 278 KARRPESA 285
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.301    0.108    0.279 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 763,979
Number of extensions: 1405
Number of successful extensions: 131
Number of sequences better than 10000.0: 131
Number of HSP's gapped: 131
Number of HSP's successfully gapped: 131
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.4 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package