Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 390 NP_001035957 20 390 XP_005276506 20 390 XP_006721991 20 390 XP_006721990 20 390 XP_006721989 20 390 XP_005258041 20 390 XP_006721988 20 390 XP_006721987 20 390 XP_006721986 20 390 XP_005258040 20 390 XP_006721985 20 390 XP_006720412 20 390 NP_079027 17 4312 NP_001026890 17 4312 XP_005263279 17 4312 NP_003282 16 5631 XP_005254129 16 5631 XP_005254128 16 5631 XP_005254127 16 5631 NP_689916 15 9605 NP_001269973 15 9605 NP_065076 15 9605 NP_060124 15 9605 NP_055805 15 9605 NP_001273903 15 9605 NP_001269972 15 9605 NP_003789 15 9605 NP_919277 15 9605 NP_001180236 15 9605 XP_005276330 15 9605 XP_006723662 15 9605 XP_005260825 15 9605 XP_006723661 15 9605 XP_005267555 15 9605 XP_006720166 15 9605 XP_005267550 15 9605 XP_005267549 15 9605 XP_005267548 15 9605 XP_006720165 15 9605 XP_006720164 15 9605 XP_006720163 15 9605 XP_006720162 15 9605 XP_006720161 15 9605 XP_005252348 15 9605 XP_006715953 15 9605 XP_006715952 15 9605 XP_005250250 15 9605 XP_006715951 15 9605 XP_005250248 15 9605 XP_005249570 15 9605>NP_000258 Length = 2818 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 MKF NKMVE Sbjct: 1035 MKFRNKMVE 1043>NP_001035957 Length = 2839 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 MKF NKMVE Sbjct: 1035 MKFRNKMVE 1043>XP_005276506 Length = 151 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 MKF NKMVE Sbjct: 68 MKFRNKMVE 76>XP_006721991 Length = 1632 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 MKF NKMVE Sbjct: 1045 MKFRNKMVE 1053>XP_006721990 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 MKF NKMVE Sbjct: 1045 MKFRNKMVE 1053>XP_006721989 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 MKF NKMVE Sbjct: 1045 MKFRNKMVE 1053>XP_005258041 Length = 2836 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 MKF NKMVE Sbjct: 1035 MKFRNKMVE 1043>XP_006721988 Length = 2846 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 MKF NKMVE Sbjct: 1045 MKFRNKMVE 1053>XP_006721987 Length = 2849 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 MKF NKMVE Sbjct: 1045 MKFRNKMVE 1053>XP_006721986 Length = 2854 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 MKF NKMVE Sbjct: 1032 MKFRNKMVE 1040>XP_005258040 Length = 2857 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 MKF NKMVE Sbjct: 1035 MKFRNKMVE 1043>XP_006721985 Length = 2867 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 MKF NKMVE Sbjct: 1045 MKFRNKMVE 1053>XP_006720412 Length = 128 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 MKF NKMVE Sbjct: 45 MKFRNKMVE 53>NP_079027 Length = 546 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KFSNKMVE 9 KFS K+VE Sbjct: 217 KFSEKLVE 224>NP_001026890 Length = 633 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KFSNKMVE 9 KFS K+VE Sbjct: 304 KFSEKLVE 311>XP_005263279 Length = 633 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KFSNKMVE 9 KFS K+VE Sbjct: 304 KFSEKLVE 311>NP_003282 Length = 1249 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 +KF+ K+VE Sbjct: 1199 LKFATKLVE 1207>XP_005254129 Length = 1262 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 +KF+ K+VE Sbjct: 1212 LKFATKLVE 1220>XP_005254128 Length = 1291 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 +KF+ K+VE Sbjct: 1241 LKFATKLVE 1249>XP_005254127 Length = 1304 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MKFSNKMVE 9 +KF+ K+VE Sbjct: 1254 LKFATKLVE 1262>NP_689916 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MKFSNKM 7 MKFSN++ Sbjct: 215 MKFSNEV 221>NP_001269973 Length = 2083 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF+NK V Sbjct: 1372 LKFTNKTV 1379>NP_065076 Length = 1873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF NK+V Sbjct: 1193 LKFPNKIV 1200>NP_060124 Length = 1589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MKFSNKM 7 MKFSN++ Sbjct: 213 MKFSNEV 219>NP_055805 Length = 2036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF+NK V Sbjct: 1325 LKFTNKTV 1332>NP_001273903 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFSNKMVE 9 +F N+MVE Sbjct: 196 QFGNEMVE 203>NP_001269972 Length = 2049 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF+NK V Sbjct: 1338 LKFTNKTV 1345>NP_003789 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFSNKMVE 9 +F N+MVE Sbjct: 196 QFGNEMVE 203>NP_919277 Length = 2083 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF+NK V Sbjct: 1325 LKFTNKTV 1332>NP_001180236 Length = 1589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MKFSNKM 7 MKFSN++ Sbjct: 213 MKFSNEV 219>XP_005276330 Length = 111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MKFSNKMVE 9 +KF NK+ E Sbjct: 58 IKFPNKLYE 66>XP_006723662 Length = 1920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF NK+V Sbjct: 1240 LKFPNKIV 1247>XP_005260825 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF NK+V Sbjct: 1193 LKFPNKIV 1200>XP_006723661 Length = 1970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF NK+V Sbjct: 1240 LKFPNKIV 1247>XP_005267555 Length = 1325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF+NK V Sbjct: 566 LKFTNKTV 573>XP_006720166 Length = 2083 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF+NK V Sbjct: 1372 LKFTNKTV 1379>XP_005267550 Length = 2084 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF+NK V Sbjct: 1325 LKFTNKTV 1332>XP_005267549 Length = 2130 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF+NK V Sbjct: 1372 LKFTNKTV 1379>XP_005267548 Length = 2131 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF+NK V Sbjct: 1372 LKFTNKTV 1379>XP_006720165 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF+NK V Sbjct: 1831 LKFTNKTV 1838>XP_006720164 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF+NK V Sbjct: 1831 LKFTNKTV 1838>XP_006720163 Length = 2543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF+NK V Sbjct: 1784 LKFTNKTV 1791>XP_006720162 Length = 2589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF+NK V Sbjct: 1831 LKFTNKTV 1838>XP_006720161 Length = 2590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MKFSNKMV 8 +KF+NK V Sbjct: 1831 LKFTNKTV 1838>XP_005252348 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KFSNKMVE 9 +F N+MVE Sbjct: 196 QFGNEMVE 203>XP_006715953 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MKFSNKM 7 MKFSN++ Sbjct: 215 MKFSNEV 221>XP_006715952 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MKFSNKM 7 MKFSN++ Sbjct: 215 MKFSNEV 221>XP_005250250 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MKFSNKM 7 MKFSN++ Sbjct: 215 MKFSNEV 221>XP_006715951 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MKFSNKM 7 MKFSN++ Sbjct: 215 MKFSNEV 221>XP_005250248 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MKFSNKM 7 MKFSN++ Sbjct: 215 MKFSNEV 221>XP_005249570 Length = 111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MKFSNKMVE 9 +KF NK+ E Sbjct: 58 IKFPNKLYE 66Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.122 0.308 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 367,139 Number of extensions: 374 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |