Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 20 390 XP_006714104 20 390 XP_005265800 20 390 XP_006714103 20 390 XP_006714102 20 390 NP_001103224 18 1935 XP_006719593 18 1935 XP_006719591 18 1935 XP_006716564 18 1935 XP_005250826 18 1935 NP_001106 18 1935 NP_001186068 17 4312 NP_067032 17 4312 NP_001186067 17 4312 NP_037521 17 4312 NP_001095118 17 4312 XP_006715772 17 4312 NP_001275635 16 7355 NP_000868 16 7355 NP_666018 16 7355 NP_001139150 16 7355 NP_005406 16 7355 NP_006511 16 7355 XP_006714651 16 7355 XP_005263991 16 7355 XP_005263989 16 7355 XP_005263990 16 7355 XP_005263988 16 7355 XP_005263987 16 7355 XP_005263986 16 7355 XP_006710015 16 7355 XP_006710014 16 7355 NP_001273579 15 9605 NP_000659 15 9605 NP_000660 15 9605 NP_064587 15 9605 NP_004362 15 9605 NP_001091868 15 9605 NP_060009 15 9605 NP_000658 15 9605 NP_057326 15 9605 NP_000661 15 9605 XP_006721125 15 9605 XP_005263116 15 9605 XP_005262788 15 9605 XP_006714142 15 9605 NP_001095940 15 9605 NP_001153166 15 9605 NP_000663 15 9605 NP_061720 15 9605>NP_006197 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IVVTCAVF 9 IVVTCAVF Sbjct: 231 IVVTCAVF 238>XP_006714104 Length = 832 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IVVTCAVF 9 IVVTCAVF Sbjct: 256 IVVTCAVF 263>XP_005265800 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IVVTCAVF 9 IVVTCAVF Sbjct: 231 IVVTCAVF 238>XP_006714103 Length = 1111 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IVVTCAVF 9 IVVTCAVF Sbjct: 253 IVVTCAVF 260>XP_006714102 Length = 1114 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IVVTCAVF 9 IVVTCAVF Sbjct: 256 IVVTCAVF 263>NP_001103224 Length = 2215 Score = 17.7 bits (34), Expect = 1935 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 MIVVTCAVF 9 M+++TC +F Sbjct: 7 MVILTCLIF 15>XP_006719593 Length = 1304 Score = 17.7 bits (34), Expect = 1935 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 MIVVTCAVF 9 M+++TC +F Sbjct: 7 MVILTCLIF 15>XP_006719591 Length = 2230 Score = 17.7 bits (34), Expect = 1935 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 MIVVTCAVF 9 M+++TC +F Sbjct: 7 MVILTCLIF 15>XP_006716564 Length = 1185 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIVVTCAVF 9 + +VTCAVF Sbjct: 776 LAMVTCAVF 784>XP_005250826 Length = 1221 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIVVTCAVF 9 + +VTCAVF Sbjct: 812 LAMVTCAVF 820>NP_001106 Length = 1251 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIVVTCAVF 9 + +VTCAVF Sbjct: 842 LAMVTCAVF 850>NP_001186068 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IVVTCAV 8 +V+TCA+ Sbjct: 341 VVITCAI 347>NP_067032 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IVVTCAV 8 +V+TCA+ Sbjct: 341 VVITCAI 347>NP_001186067 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IVVTCAV 8 +V+TCA+ Sbjct: 341 VVITCAI 347>NP_037521 Length = 1359 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 MIVVTCAVF 9 +I++ C+VF Sbjct: 287 LIIILCSVF 295>NP_001095118 Length = 1332 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 MIVVTCAVF 9 +I++ C+VF Sbjct: 287 LIIILCSVF 295>XP_006715772 Length = 724 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 MIVVTCAVF 9 +I++ C+VF Sbjct: 287 LIIILCSVF 295>NP_001275635 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 IVVTCAVF 9 +++ C+VF Sbjct: 347 VIIVCSVF 354>NP_000868 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 IVVTCAVF 9 +++ C+VF Sbjct: 347 VIIVCSVF 354>NP_666018 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VVTCAVF 9 ++TC+VF Sbjct: 290 ILTCSVF 296>NP_001139150 Length = 1275 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 MIVVTCAVF 9 +IV+ C +F Sbjct: 1018 LIVIICRIF 1026>NP_005406 Length = 679 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MIVVTCAVF 9 +I V CAVF Sbjct: 233 LISVGCAVF 241>NP_006511 Length = 116 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VVTCAV 8 +VTCAV Sbjct: 65 IVTCAV 70>XP_006714651 Length = 1280 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 MIVVTCAVF 9 +IV+ C +F Sbjct: 1023 LIVIICRIF 1031>XP_005263991 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 IVVTCAVF 9 +++ C+VF Sbjct: 347 VIIVCSVF 354>XP_005263989 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 IVVTCAVF 9 +++ C+VF Sbjct: 347 VIIVCSVF 354>XP_005263990 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 IVVTCAVF 9 +++ C+VF Sbjct: 347 VIIVCSVF 354>XP_005263988 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 IVVTCAVF 9 +++ C+VF Sbjct: 347 VIIVCSVF 354>XP_005263987 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 IVVTCAVF 9 +++ C+VF Sbjct: 347 VIIVCSVF 354>XP_005263986 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 IVVTCAVF 9 +++ C+VF Sbjct: 347 VIIVCSVF 354>XP_006710015 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 MIVVTCAVF 9 +++V C+VF Sbjct: 370 LLLVACSVF 378>XP_006710014 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 MIVVTCAVF 9 +++V C+VF Sbjct: 370 LLLVACSVF 378>NP_001273579 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TCAVF 9 TCAVF Sbjct: 155 TCAVF 159>NP_000659 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TCAVF 9 TCAVF Sbjct: 195 TCAVF 199>NP_000660 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TCAVF 9 TCAVF Sbjct: 195 TCAVF 199>NP_064587 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TCAVF 9 TCAVF Sbjct: 96 TCAVF 100>NP_004362 Length = 1224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VTCAVF 9 V+CAVF Sbjct: 252 VSCAVF 257>NP_001091868 Length = 1233 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VTCAVF 9 V+CAVF Sbjct: 252 VSCAVF 257>NP_060009 Length = 4116 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TCAVF 9 TCAVF Sbjct: 1524 TCAVF 1528>NP_000658 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TCAVF 9 TCAVF Sbjct: 195 TCAVF 199>NP_057326 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MIVVTCAVF 9 +IV+T +VF Sbjct: 199 LIVITLSVF 207>NP_000661 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TCAVF 9 TCAVF Sbjct: 200 TCAVF 204>XP_006721125 Length = 4070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TCAVF 9 TCAVF Sbjct: 1478 TCAVF 1482>XP_005263116 Length = 190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MIVVTCAVF 9 +IV+T +VF Sbjct: 128 LIVITLSVF 136>XP_005262788 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TCAVF 9 TCAVF Sbjct: 195 TCAVF 199>XP_006714142 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TCAVF 9 TCAVF Sbjct: 155 TCAVF 159>NP_001095940 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TCAVF 9 TCAVF Sbjct: 195 TCAVF 199>NP_001153166 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MIVVTCAVF 9 +IV+T +VF Sbjct: 186 LIVITLSVF 194>NP_000663 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TCAVF 9 TCAVF Sbjct: 195 TCAVF 199>NP_061720 Length = 4024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TCAVF 9 TCAVF Sbjct: 1423 TCAVF 1427Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.356 0.147 0.483 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 507,246 Number of extensions: 461 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |