Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_689417 17 3301 XP_006720248 17 3301 XP_005267848 17 3301 NP_060413 17 3301 NP_839955 16 5631 NP_001020095 16 5631 XP_005265807 16 5631 XP_006714105 16 5631 XP_005265805 16 5631 XP_005265804 16 5631 NP_060731 16 5631 NP_001161384 16 7355 NP_001161383 16 7355 NP_001161388 16 7355 NP_001161389 16 7355 NP_001193723 16 7355 NP_001161387 16 7355 NP_078897 16 7355 NP_112739 16 7355 NP_002883 16 7355 NP_075377 16 7355 NP_075376 16 7355 NP_057458 16 7355 XP_005268022 16 7355 XP_005268021 16 7355 XP_005247825 16 7355 XP_005247824 16 7355 XP_005273217 16 7355 XP_006711844 16 7355 XP_006711507 16 7355 NP_085118 15 9605 NP_005346 15 9605 NP_055851 15 9605 NP_001964 15 9605 XP_006715536 15 9605 XP_005245008 15 9605 XP_005245007 15 9605 NP_068567 15 9605>NP_689417 Length = 711 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MIKLFRLI 8 M+K+FRL+ Sbjct: 583 MVKIFRLL 590>XP_006720248 Length = 711 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MIKLFRLI 8 M+K+FRL+ Sbjct: 583 MVKIFRLL 590>XP_005267848 Length = 711 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MIKLFRLI 8 M+K+FRL+ Sbjct: 583 MVKIFRLL 590>NP_060413 Length = 711 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MIKLFRLI 8 M+K+FRL+ Sbjct: 583 MVKIFRLL 590>NP_839955 Length = 879 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 MIK+FR I Sbjct: 568 MIKIFRCI 575>NP_001020095 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 MIK+FR I Sbjct: 583 MIKIFRCI 590>XP_005265807 Length = 879 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 MIK+FR I Sbjct: 568 MIKIFRCI 575>XP_006714105 Length = 897 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 MIK+FR I Sbjct: 586 MIKIFRCI 593>XP_005265805 Length = 912 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 MIK+FR I Sbjct: 601 MIKIFRCI 608>XP_005265804 Length = 912 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 MIK+FR I Sbjct: 601 MIKIFRCI 608>NP_060731 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 MIK+FR I Sbjct: 583 MIKIFRCI 590>NP_001161384 Length = 833 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIKLFRLIL 9 M +LFRL+L Sbjct: 1 MHQLFRLVL 9>NP_001161383 Length = 788 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIKLFRLIL 9 M +LFRL+L Sbjct: 1 MHQLFRLVL 9>NP_001161388 Length = 213 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIKLFRLIL 9 M +LFRL+L Sbjct: 1 MHQLFRLVL 9>NP_001161389 Length = 177 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIKLFRLIL 9 M +LFRL+L Sbjct: 1 MHQLFRLVL 9>NP_001193723 Length = 1312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 + KLFRL+ Sbjct: 340 LFKLFRLV 347>NP_001161387 Length = 213 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIKLFRLIL 9 M +LFRL+L Sbjct: 1 MHQLFRLVL 9>NP_078897 Length = 833 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIKLFRLIL 9 M +LFRL+L Sbjct: 1 MHQLFRLVL 9>NP_112739 Length = 1226 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 + KLFRL+ Sbjct: 340 LFKLFRLV 347>NP_002883 Length = 1257 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 + KLFRL+ Sbjct: 343 LFKLFRLV 350>NP_075377 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 + KLFRL+ Sbjct: 343 LFKLFRLV 350>NP_075376 Length = 1203 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 + KLFRL+ Sbjct: 343 LFKLFRLV 350>NP_057458 Length = 1312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 + KLFRL+ Sbjct: 340 LFKLFRLV 347>XP_005268022 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 + KLFRL+ Sbjct: 343 LFKLFRLV 350>XP_005268021 Length = 1277 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 + KLFRL+ Sbjct: 343 LFKLFRLV 350>XP_005247825 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIKLFRLIL 9 M +LFRL+L Sbjct: 1 MHQLFRLVL 9>XP_005247824 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MIKLFRLIL 9 M +LFRL+L Sbjct: 1 MHQLFRLVL 9>XP_005273217 Length = 1141 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 + KLFRL+ Sbjct: 340 LFKLFRLV 347>XP_006711844 Length = 1276 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MIKLFRLI 8 + KLFRL+ Sbjct: 340 LFKLFRLV 347>XP_006711507 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MIKLFRLI 8 M+K+F+L+ Sbjct: 345 MVKIFKLL 352>NP_085118 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KLFRLIL 9 +LFRLIL Sbjct: 103 ELFRLIL 109>NP_005346 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KLFRLIL 9 +LFRLIL Sbjct: 103 ELFRLIL 109>NP_055851 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IKLFRLI 8 IKLF+LI Sbjct: 340 IKLFQLI 346>NP_001964 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKLFRLI 8 +KLF+LI Sbjct: 160 VKLFKLI 166>XP_006715536 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KLFRLIL 9 +LFRLIL Sbjct: 103 ELFRLIL 109>XP_005245008 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKLFRLI 8 +KLF+LI Sbjct: 160 VKLFKLI 166>XP_005245007 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKLFRLI 8 +KLF+LI Sbjct: 160 VKLFKLI 166>NP_068567 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKLFRLI 8 +KLF+LI Sbjct: 160 VKLFKLI 166Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.366 0.178 0.466 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 314,746 Number of extensions: 385 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |