Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 20 509 XP_006715292 20 509 NP_002418 17 3301 NP_002413 17 3301 NP_002416 17 3301 NP_055791 17 4312 NP_003038 17 4312 XP_006720419 17 4312 XP_005269704 17 4312 NP_071405 17 4312 NP_008973 16 5631 NP_689669 16 5631 NP_001166242 16 5631 NP_001166243 16 5631 NP_001092253 16 5631 NP_000544 16 7355 NP_001244336 15 9605 NP_000409 15 9605 NP_001244335 15 9605 NP_001157745 15 9605 NP_001074010 15 9605 NP_001093869 15 9605 NP_631902 15 9605 NP_001276922 15 9605 NP_001120863 15 9605 XP_005255366 15 9605 XP_005255362 15 9605 XP_005254311 15 9605 XP_006720508 15 9605 XP_006720507 15 9605 XP_005254310 15 9605 XP_005254309 15 9605 XP_005254306 15 9605 XP_005254305 15 9605 XP_005254304 15 9605 XP_005254303 15 9605 XP_006720506 15 9605 XP_005254302 15 9605 XP_005254301 15 9605 XP_006720505 15 9605 XP_005254300 15 9605 XP_005262709 15 9605 XP_006712336 15 9605 NP_703148 15 9605>NP_115927 Length = 1321 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MFRVVNVTP 9 MF VVNVTP Sbjct: 337 MFGVVNVTP 345>XP_006715292 Length = 759 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MFRVVNVTP 9 MF VVNVTP Sbjct: 324 MFGVVNVTP 332>NP_002418 Length = 471 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRVVNVTP 9 +R+VN TP Sbjct: 120 YRIVNYTP 127>NP_002413 Length = 477 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRVVNVTP 9 +R+VN TP Sbjct: 116 YRIVNYTP 123>NP_002416 Length = 476 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRVVNVTP 9 +R+VN TP Sbjct: 115 YRIVNYTP 122>NP_055791 Length = 1871 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 MFRVVNVTP 9 M RVV VTP Sbjct: 1234 MGRVVKVTP 1242>NP_003038 Length = 815 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRVVNVTP 9 FR+V +TP Sbjct: 439 FRIVKLTP 446>XP_006720419 Length = 138 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MFRVVNVTP 9 M +VVN++P Sbjct: 96 MLQVVNISP 104>XP_005269704 Length = 1872 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 MFRVVNVTP 9 M RVV VTP Sbjct: 1234 MGRVVKVTP 1242>NP_071405 Length = 513 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FRVVNVTP 9 +R++N TP Sbjct: 113 YRIINYTP 120>NP_008973 Length = 124 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRVVNVTP 9 FRV+ V+P Sbjct: 102 FRVIQVSP 109>NP_689669 Length = 242 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 +FR+ NVT Sbjct: 71 VFRIANVT 78>NP_001166242 Length = 241 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 +FR+ NVT Sbjct: 71 VFRIANVT 78>NP_001166243 Length = 242 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 +FR+ NVT Sbjct: 71 VFRIANVT 78>NP_001092253 Length = 124 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRVVNVTP 9 FRV+ V+P Sbjct: 102 FRVIQVSP 109>NP_000544 Length = 1432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRVVNVTP 9 +R+V VTP Sbjct: 636 YRIVYVTP 643>NP_001244336 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRVVNVT 8 FR+ NVT Sbjct: 157 FRIYNVT 163>NP_000409 Length = 825 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRVVNVT 8 FR+ NVT Sbjct: 172 FRIYNVT 178>NP_001244335 Length = 825 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRVVNVT 8 FR+ NVT Sbjct: 172 FRIYNVT 178>NP_001157745 Length = 3065 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 2648 MPRIVNVT 2655>NP_001074010 Length = 2856 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 2439 MPRIVNVT 2446>NP_001093869 Length = 1337 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RVVNVTP 9 R+++VTP Sbjct: 1203 RIISVTP 1209>NP_631902 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FRVVNVTP 9 + V+NV+P Sbjct: 78 YEVINVSP 85>NP_001276922 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FRVVNVTP 9 + V+NV+P Sbjct: 78 YEVINVSP 85>NP_001120863 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FRVVNVTP 9 + V+NV+P Sbjct: 78 YEVINVSP 85>XP_005255366 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRVVNVT 8 FR+ NVT Sbjct: 232 FRIYNVT 238>XP_005255362 Length = 885 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRVVNVT 8 FR+ NVT Sbjct: 232 FRIYNVT 238>XP_005254311 Length = 1627 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 1210 MPRIVNVT 1217>XP_006720508 Length = 2658 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 2241 MPRIVNVT 2248>XP_006720507 Length = 2763 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 2346 MPRIVNVT 2353>XP_005254310 Length = 2906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 2489 MPRIVNVT 2496>XP_005254309 Length = 2956 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 2539 MPRIVNVT 2546>XP_005254306 Length = 3066 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 2649 MPRIVNVT 2656>XP_005254305 Length = 3114 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 2697 MPRIVNVT 2704>XP_005254304 Length = 3115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 2698 MPRIVNVT 2705>XP_005254303 Length = 3115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 2698 MPRIVNVT 2705>XP_006720506 Length = 3115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 2698 MPRIVNVT 2705>XP_005254302 Length = 3115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 2698 MPRIVNVT 2705>XP_005254301 Length = 3115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 2698 MPRIVNVT 2705>XP_006720505 Length = 3115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 2698 MPRIVNVT 2705>XP_005254300 Length = 3115 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MFRVVNVT 8 M R+VNVT Sbjct: 2698 MPRIVNVT 2705>XP_005262709 Length = 1337 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RVVNVTP 9 R+++VTP Sbjct: 1203 RIISVTP 1209>XP_006712336 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FRVVNVTP 9 + V+NV+P Sbjct: 78 YEVINVSP 85>NP_703148 Length = 1200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 MFRVVNVTP 9 MFR +TP Sbjct: 816 MFRNAQITP 824Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.143 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 366,657 Number of extensions: 633 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |