Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 18 1135 NP_001185763 18 1135 NP_055459 18 1135 NP_001002811 18 1135 NP_001002812 18 1135 XP_006711719 18 1135 XP_006711717 18 1135 XP_006711716 18 1135 XP_006711715 18 1135 XP_006711714 18 1135 XP_006711713 18 1135 XP_006711712 18 1135 XP_006711711 18 1135 XP_006711710 18 1135 XP_006711709 18 1135 XP_005277503 18 1135 XP_005273038 18 1135 XP_006711708 18 1135 XP_005277500 18 1135 XP_006711707 18 1135 XP_005277499 18 1135 XP_006711706 18 1135 XP_006711705 18 1135 NP_997279 16 5631 XP_006710702 16 5631 XP_006710701 16 5631 NP_001180197 16 7355 NP_036287 16 7355 NP_001180198 16 7355 NP_036423 16 7355 NP_003651 16 7355 XP_006723513 16 7355 XP_006723189 16 7355 XP_006723188 16 7355 XP_006719768 16 7355 NP_001269557 15 9605 NP_001269560 15 9605 NP_000038 15 9605 NP_001099038 15 9605 NP_001099037 15 9605 NP_001099036 15 9605 NP_071396 15 9605 NP_002636 15 9605 XP_005274578 15 9605 XP_005274576 15 9605 XP_005274575 15 9605 XP_005253036 15 9605 XP_005253035 15 9605 XP_005253034 15 9605 XP_006715230 15 9605 XP_006715229 15 9605 XP_005249350 15 9605 XP_005249349 15 9605 XP_005249348 15 9605 XP_005249347 15 9605 XP_005249346 15 9605>NP_001185761 Length = 2240 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 893 MERLTQEVL 901>NP_001185763 Length = 2362 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 827 MERLTQEVL 835>NP_055459 Length = 2346 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 827 MERLTQEVL 835>NP_001002811 Length = 1132 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 990 MERLTQEVL 998>NP_001002812 Length = 969 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 827 MERLTQEVL 835>XP_006711719 Length = 2302 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 893 MERLTQEVL 901>XP_006711717 Length = 2385 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 893 MERLTQEVL 901>XP_006711716 Length = 2411 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 893 MERLTQEVL 901>XP_006711715 Length = 2428 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 827 MERLTQEVL 835>XP_006711714 Length = 2429 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 827 MERLTQEVL 835>XP_006711713 Length = 2432 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 830 MERLTQEVL 838>XP_006711712 Length = 2473 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 990 MERLTQEVL 998>XP_006711711 Length = 2482 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 990 MERLTQEVL 998>XP_006711710 Length = 2494 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 893 MERLTQEVL 901>XP_006711709 Length = 2495 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 893 MERLTQEVL 901>XP_005277503 Length = 2498 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 990 MERLTQEVL 998>XP_005273038 Length = 2509 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 990 MERLTQEVL 998>XP_006711708 Length = 2512 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 990 MERLTQEVL 998>XP_005277500 Length = 2525 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 990 MERLTQEVL 998>XP_006711707 Length = 2553 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 990 MERLTQEVL 998>XP_005277499 Length = 2561 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 990 MERLTQEVL 998>XP_006711706 Length = 2591 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 990 MERLTQEVL 998>XP_006711705 Length = 2592 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 MERLTQ VL Sbjct: 990 MERLTQEVL 998>NP_997279 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ERLTQAVL 9 ERL QAVL Sbjct: 202 ERLEQAVL 209>XP_006710702 Length = 353 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ERLTQAVL 9 ERL QAVL Sbjct: 250 ERLEQAVL 257>XP_006710701 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ERLTQAVL 9 ERL QAVL Sbjct: 202 ERLEQAVL 209>NP_001180197 Length = 850 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLTQAVL 9 R+TQAVL Sbjct: 485 RITQAVL 491>NP_036287 Length = 649 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLTQAVL 9 R+TQAVL Sbjct: 284 RITQAVL 290>NP_001180198 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLTQAVL 9 R+TQAVL Sbjct: 431 RITQAVL 437>NP_036423 Length = 2120 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ERLTQAV 8 ERLTQA+ Sbjct: 1196 ERLTQAL 1202>NP_003651 Length = 1194 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MERLTQAV 8 +ER+TQA+ Sbjct: 724 LERMTQAL 731>XP_006723513 Length = 1185 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MERLTQAV 8 +ER+TQA+ Sbjct: 724 LERMTQAL 731>XP_006723189 Length = 795 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLTQAVL 9 R+TQAVL Sbjct: 430 RITQAVL 436>XP_006723188 Length = 849 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLTQAVL 9 R+TQAVL Sbjct: 484 RITQAVL 490>XP_006719768 Length = 2120 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ERLTQAV 8 ERLTQA+ Sbjct: 1196 ERLTQAL 1202>NP_001269557 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 MER+ QAV Sbjct: 563 MERVQQAV 570>NP_001269560 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 MER+ QAV Sbjct: 493 MERVQQAV 500>NP_000038 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 MER+ QAV Sbjct: 538 MERVQQAV 545>NP_001099038 Length = 1749 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 +ERL QAV Sbjct: 1346 LERLRQAV 1353>NP_001099037 Length = 1757 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 +ERL QAV Sbjct: 1346 LERLRQAV 1353>NP_001099036 Length = 1770 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 +ERL QAV Sbjct: 1359 LERLRQAV 1366>NP_071396 Length = 1805 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 +ERL QAV Sbjct: 1359 LERLRQAV 1366>NP_002636 Length = 1686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 +E+LTQA L Sbjct: 92 VEKLTQAEL 100>XP_005274578 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 MER+ QAV Sbjct: 484 MERVQQAV 491>XP_005274576 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 MER+ QAV Sbjct: 538 MERVQQAV 545>XP_005274575 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 MER+ QAV Sbjct: 547 MERVQQAV 554>XP_005253036 Length = 1686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 +E+LTQA L Sbjct: 92 VEKLTQAEL 100>XP_005253035 Length = 1686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 +E+LTQA L Sbjct: 92 VEKLTQAEL 100>XP_005253034 Length = 1686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MERLTQAVL 9 +E+LTQA L Sbjct: 92 VEKLTQAEL 100>XP_006715230 Length = 1734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 +ERL QAV Sbjct: 1288 LERLRQAV 1295>XP_006715229 Length = 1782 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 +ERL QAV Sbjct: 1336 LERLRQAV 1343>XP_005249350 Length = 1810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 +ERL QAV Sbjct: 1399 LERLRQAV 1406>XP_005249349 Length = 1824 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 +ERL QAV Sbjct: 1399 LERLRQAV 1406>XP_005249348 Length = 1832 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 +ERL QAV Sbjct: 1386 LERLRQAV 1393>XP_005249347 Length = 1837 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 +ERL QAV Sbjct: 1399 LERLRQAV 1406>XP_005249346 Length = 1845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MERLTQAV 8 +ERL QAV Sbjct: 1399 LERLRQAV 1406Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.131 0.310 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 329,827 Number of extensions: 293 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |