Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 18 1935 NP_060785 18 1935 NP_361014 18 1935 NP_694574 17 2528 XP_005256319 17 2528 XP_006721414 17 2528 NP_001073936 16 5631 NP_000005 16 5631 NP_001036083 16 5631 NP_005475 16 5631 XP_006726604 16 5631 XP_006726603 16 5631 XP_006725215 16 5631 XP_005267304 16 5631 XP_006719240 16 5631 XP_006719237 16 5631 XP_006719119 16 5631 NP_892006 16 7355 NP_149062 16 7355 NP_877398 16 7355 NP_056007 16 7355 NP_001093900 16 7355 NP_001406 16 7355 XP_005260738 16 7355 XP_006723618 16 7355 XP_006715488 16 7355 XP_006715487 16 7355 XP_006715486 16 7355 XP_006715485 16 7355 XP_006715484 16 7355 XP_006715483 16 7355 XP_006715482 16 7355 XP_006715481 16 7355 XP_006715480 16 7355 XP_006715479 16 7355 XP_006715478 16 7355 XP_006715477 16 7355 XP_006715476 16 7355 XP_006715475 16 7355 XP_006715474 16 7355 XP_006715473 16 7355 XP_006715472 16 7355 XP_006715471 16 7355 XP_006715470 16 7355 XP_006714348 16 7355 XP_006714347 16 7355 NP_001093896 16 7355 NP_001093898 16 7355 NP_066982 16 7355 NP_001093897 16 7355 NP_001093899 16 7355 NP_002855 15 9605 NP_065831 15 9605 NP_061180 15 9605 NP_003787 15 9605 NP_001239570 15 9605 XP_005259420 15 9605 XP_005259419 15 9605>NP_001013433 Length = 589 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MELKYNILV 9 MELK NILV Sbjct: 469 MELKDNILV 477>NP_060785 Length = 627 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MELKYNILV 9 MELK NILV Sbjct: 507 MELKDNILV 515>NP_361014 Length = 707 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MELKYNILV 9 MELK NILV Sbjct: 587 MELKDNILV 595>NP_694574 Length = 896 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ELKYNILV 9 E++YNILV Sbjct: 344 EMEYNILV 351>XP_005256319 Length = 678 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ELKYNILV 9 E++YNILV Sbjct: 344 EMEYNILV 351>XP_006721414 Length = 810 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ELKYNILV 9 E++YNILV Sbjct: 258 EMEYNILV 265>NP_001073936 Length = 1848 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MELKYNI 7 M+L+YNI Sbjct: 1710 MQLRYNI 1716>NP_000005 Length = 1474 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LKYNIL 8 LKYNIL Sbjct: 1328 LKYNIL 1333>NP_001036083 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MELKYN 6 ME+KYN Sbjct: 243 MEMKYN 248>NP_005475 Length = 583 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MELKYN 6 ME+KYN Sbjct: 256 MEMKYN 261>XP_006726604 Length = 232 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LKYNILV 9 LKYN+L+ Sbjct: 107 LKYNVLL 113>XP_006726603 Length = 1264 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LKYNILV 9 LKYN+L+ Sbjct: 1125 LKYNVLL 1131>XP_006725215 Length = 1264 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LKYNILV 9 LKYN+L+ Sbjct: 1125 LKYNVLL 1131>XP_005267304 Length = 500 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MELKYN 6 ME+KYN Sbjct: 256 MEMKYN 261>XP_006719240 Length = 113 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LKYNILV 9 LKYN+L+ Sbjct: 21 LKYNVLL 27>XP_006719237 Length = 1263 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LKYNILV 9 LKYN+L+ Sbjct: 1124 LKYNVLL 1130>XP_006719119 Length = 1512 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LKYNIL 8 LKYNIL Sbjct: 1328 LKYNIL 1333>NP_892006 Length = 8797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 506 LELKYRLL 513>NP_149062 Length = 8749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 513 LELKYRLL 520>NP_877398 Length = 1173 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MELKYNILV 9 M+L Y ILV Sbjct: 456 MDLMYKILV 464>NP_056007 Length = 1216 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MELKYNILV 9 M+L Y ILV Sbjct: 456 MDLMYKILV 464>NP_001093900 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELKYNILV 9 E+KYN +V Sbjct: 459 EIKYNSMV 466>NP_001406 Length = 472 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELKYNILV 9 +LKYNI V Sbjct: 227 QLKYNIEV 234>XP_005260738 Length = 877 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MELKYNILV 9 M+L Y ILV Sbjct: 456 MDLMYKILV 464>XP_006723618 Length = 1173 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MELKYNILV 9 M+L Y ILV Sbjct: 456 MDLMYKILV 464>XP_006715488 Length = 8721 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 513 LELKYRLL 520>XP_006715487 Length = 8744 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 513 LELKYRLL 520>XP_006715486 Length = 8758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 513 LELKYRLL 520>XP_006715485 Length = 8793 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 513 LELKYRLL 520>XP_006715484 Length = 8794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 513 LELKYRLL 520>XP_006715483 Length = 8795 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 513 LELKYRLL 520>XP_006715482 Length = 8797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 506 LELKYRLL 513>XP_006715481 Length = 8799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 466 LELKYRLL 473>XP_006715480 Length = 8799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 513 LELKYRLL 520>XP_006715479 Length = 8804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 513 LELKYRLL 520>XP_006715478 Length = 8809 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 513 LELKYRLL 520>XP_006715477 Length = 8822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 489 LELKYRLL 496>XP_006715476 Length = 8823 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 513 LELKYRLL 520>XP_006715475 Length = 8827 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 513 LELKYRLL 520>XP_006715474 Length = 8829 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 496 LELKYRLL 503>XP_006715473 Length = 8832 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 513 LELKYRLL 520>XP_006715472 Length = 8839 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 506 LELKYRLL 513>XP_006715471 Length = 8842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 513 LELKYRLL 520>XP_006715470 Length = 8846 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 +ELKY +L Sbjct: 513 LELKYRLL 520>XP_006714348 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELKYNILV 9 E+KYN +V Sbjct: 421 EIKYNSMV 428>XP_006714347 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELKYNILV 9 E+KYN +V Sbjct: 470 EIKYNSMV 477>NP_001093896 Length = 608 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELKYNILV 9 E+KYN +V Sbjct: 551 EIKYNSMV 558>NP_001093898 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELKYNILV 9 E+KYN +V Sbjct: 502 EIKYNSMV 509>NP_066982 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELKYNILV 9 E+KYN +V Sbjct: 550 EIKYNSMV 557>NP_001093897 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELKYNILV 9 E+KYN +V Sbjct: 550 EIKYNSMV 557>NP_001093899 Length = 558 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELKYNILV 9 E+KYN +V Sbjct: 501 EIKYNSMV 508>NP_002855 Length = 1482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LKYNIL 8 +KYNIL Sbjct: 1334 MKYNIL 1339>NP_065831 Length = 1392 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 MELKYNI 7 ++LKYN+ Sbjct: 770 LDLKYNL 776>NP_061180 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MELKYNIL 8 MEL++N L Sbjct: 164 MELRFNTL 171>NP_003787 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELKYNILV 9 +L YNI+V Sbjct: 71 KLSYNIMV 78>NP_001239570 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELKYNILV 9 +L YNI+V Sbjct: 53 KLSYNIMV 60>XP_005259420 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELKYNILV 9 +L YNI+V Sbjct: 71 KLSYNIMV 78>XP_005259419 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ELKYNILV 9 +L YNI+V Sbjct: 53 KLSYNIMV 60Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.146 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 495,090 Number of extensions: 782 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |