Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 20 390 NP_689939 18 1935 XP_005274116 17 2528 XP_006718652 17 2528 XP_005274115 17 2528 XP_005274114 17 2528 NP_000244 17 4312 XP_005263082 17 4312 NP_620706 16 5631 NP_003066 16 5631 NP_001123892 16 5631 NP_001189398 16 5631 XP_005269161 16 5631 XP_005269160 16 5631 XP_005269159 16 5631 XP_005269158 16 5631 NP_000107 16 7355 NP_851828 16 7355 NP_620155 16 7355 NP_543006 16 7355 NP_071353 16 7355 NP_064581 16 7355 NP_061026 16 7355 NP_001157936 16 7355 XP_006724905 16 7355 XP_006724904 16 7355 XP_006724899 16 7355 XP_005260806 16 7355 XP_005257627 16 7355 XP_006712770 16 7355 XP_006712325 16 7355 NP_001034597 16 7355 NP_001474 15 9605 NP_001122074 15 9605 NP_005730 15 9605 NP_004068 15 9605 NP_066990 15 9605 NP_060124 15 9605 NP_002067 15 9605 NP_071446 15 9605 NP_060557 15 9605 NP_001129316 15 9605 NP_001180236 15 9605 XP_006723598 15 9605 XP_005254171 15 9605 XP_005245370 15 9605 XP_006710825 15 9605 NP_001162023 15 9605>NP_004110 Length = 993 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 MEFLEFKS 8 MEFLEFKS Sbjct: 799 MEFLEFKS 806>NP_689939 Length = 434 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MEFLEFKSG 9 MEFL+F G Sbjct: 266 MEFLQFSKG 274>XP_005274116 Length = 1602 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EFLEFKSG 9 EFLEF +G Sbjct: 896 EFLEFSAG 903>XP_006718652 Length = 2196 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EFLEFKSG 9 EFLEF +G Sbjct: 1466 EFLEFSAG 1473>XP_005274115 Length = 2222 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EFLEFKSG 9 EFLEF +G Sbjct: 1492 EFLEFSAG 1499>XP_005274114 Length = 2223 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EFLEFKSG 9 EFLEF +G Sbjct: 1493 EFLEFSAG 1500>NP_000244 Length = 894 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEFLEFKS 8 ++FL+FKS Sbjct: 376 LDFLDFKS 383>XP_005263082 Length = 921 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEFLEFKS 8 ++FL+FKS Sbjct: 403 LDFLDFKS 410>NP_620706 Length = 1130 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FLEFKSG 9 FL+FK+G Sbjct: 81 FLDFKAG 87>NP_003066 Length = 1214 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FLEFKSG 9 FL+FK+G Sbjct: 81 FLDFKAG 87>NP_001123892 Length = 1152 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FLEFKSG 9 FL+FK+G Sbjct: 81 FLDFKAG 87>NP_001189398 Length = 247 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MEFLEFK 7 +EFLEF+ Sbjct: 109 LEFLEFR 115>XP_005269161 Length = 1151 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FLEFKSG 9 FL+FK+G Sbjct: 81 FLDFKAG 87>XP_005269160 Length = 1213 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FLEFKSG 9 FL+FK+G Sbjct: 81 FLDFKAG 87>XP_005269159 Length = 1244 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FLEFKSG 9 FL+FK+G Sbjct: 81 FLDFKAG 87>XP_005269158 Length = 1245 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FLEFKSG 9 FL+FK+G Sbjct: 81 FLDFKAG 87>NP_000107 Length = 292 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EFLEFKSG 9 EFL FK G Sbjct: 188 EFLRFKWG 195>NP_851828 Length = 262 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EFLEFKSG 9 EFL FK G Sbjct: 158 EFLRFKWG 165>NP_620155 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FLEFKSG 9 FL+F+SG Sbjct: 406 FLDFESG 412>NP_543006 Length = 170 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EFLEFKSG 9 E +EFKSG Sbjct: 128 ENVEFKSG 135>NP_071353 Length = 1181 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MEFLEFK 7 ++FLEFK Sbjct: 1057 IDFLEFK 1063>NP_064581 Length = 855 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 MEFLEFKSG 9 + ++EFK G Sbjct: 39 LRYIEFKQG 47>NP_061026 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EFLEFKSG 9 E +EFKSG Sbjct: 128 ENVEFKSG 135>NP_001157936 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FLEFKSG 9 FL+F+SG Sbjct: 406 FLDFESG 412>XP_006724905 Length = 193 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EFLEFKSG 9 EFL FK G Sbjct: 89 EFLRFKWG 96>XP_006724904 Length = 223 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EFLEFKSG 9 EFL FK G Sbjct: 119 EFLRFKWG 126>XP_006724899 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EFLEFKSG 9 EFL FK G Sbjct: 206 EFLRFKWG 213>XP_005260806 Length = 281 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EFLEFKSG 9 E +EFKSG Sbjct: 128 ENVEFKSG 135>XP_005257627 Length = 1013 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 MEFLEFK 7 ++FLEFK Sbjct: 889 IDFLEFK 895>XP_006712770 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FLEFKSG 9 FL+F+SG Sbjct: 406 FLDFESG 412>XP_006712325 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FLEFKSG 9 FL+F+SG Sbjct: 406 FLDFESG 412>NP_001034597 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EFLEFKSG 9 E +EFKSG Sbjct: 128 ENVEFKSG 135>NP_001474 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EFLEFK 7 EFLEF+ Sbjct: 149 EFLEFR 154>NP_001122074 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MEFLEFKS 8 + +LEFKS Sbjct: 213 LTYLEFKS 220>NP_005730 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MEFLEFKS 8 + +LEFKS Sbjct: 213 LTYLEFKS 220>NP_004068 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MEFLEFKSG 9 M+F++ KSG Sbjct: 458 MKFVDSKSG 466>NP_066990 Length = 269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MEFLEF 6 ME+LEF Sbjct: 216 MEYLEF 221>NP_060124 Length = 1589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EFLEFKS 8 +FLEFK+ Sbjct: 671 KFLEFKA 677>NP_002067 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 MEFLEFKS 8 ++FL++KS Sbjct: 213 LDFLDYKS 220>NP_071446 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EFLEFKSG 9 +FL+FK G Sbjct: 127 KFLQFKLG 134>NP_060557 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EFLEFK 7 +FLEFK Sbjct: 668 QFLEFK 673>NP_001129316 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EFLEFKSG 9 + +EFKSG Sbjct: 129 DHVEFKSG 136>NP_001180236 Length = 1589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EFLEFKS 8 +FLEFK+ Sbjct: 671 KFLEFKA 677>XP_006723598 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EFLEFKSG 9 + +EFKSG Sbjct: 172 DHVEFKSG 179>XP_005254171 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MEFLEFKS 8 + +LEFKS Sbjct: 213 LTYLEFKS 220>XP_005245370 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 MEFLEFKSG 9 M FL KSG Sbjct: 376 MRFLNSKSG 384>XP_006710825 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EFLEFK 7 +FLEFK Sbjct: 663 QFLEFK 668>NP_001162023 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EFLEFK 7 +FLEFK Sbjct: 628 QFLEFK 633Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.143 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 470,938 Number of extensions: 662 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |