Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 18 1482 NP_653080 18 1482 XP_005267292 18 1482 XP_005267291 18 1482 XP_005267290 18 1482 NP_997203 17 3301 NP_037528 16 5631 NP_001269970 16 5631 NP_001269971 16 5631 NP_003651 16 5631 XP_005261006 16 5631 XP_006724055 16 5631 XP_006723513 16 5631 NP_057213 16 5631 NP_004841 16 7355 XP_006723786 16 7355 XP_006723783 16 7355 XP_006723781 16 7355 XP_006723780 16 7355 XP_006723779 16 7355 XP_006713311 16 7355 XP_006713310 16 7355 XP_005264819 16 7355 XP_006713309 16 7355 XP_005246247 16 7355 NP_060763 16 7355 NP_078789 15 9605 NP_588616 15 9605 NP_001137160 15 9605 NP_001257863 15 9605 NP_055605 15 9605 NP_001257870 15 9605 NP_001269211 15 9605 NP_006176 15 9605 NP_002069 15 9605 NP_001273490 15 9605 XP_005254204 15 9605 XP_005254202 15 9605 XP_005254201 15 9605 XP_006718633 15 9605 XP_006718632 15 9605 XP_006718631 15 9605 XP_006718630 15 9605 XP_006718629 15 9605 XP_006718628 15 9605 XP_006718627 15 9605 XP_006718626 15 9605 XP_006718625 15 9605 XP_005265541 15 9605 XP_006713398 15 9605 XP_006713397 15 9605 XP_006713396 15 9605 XP_005265132 15 9605 XP_006713173 15 9605 XP_005265130 15 9605 XP_005265129 15 9605 XP_005265127 15 9605 XP_005265126 15 9605>NP_005091 Length = 1782 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 MEAQ AQKS Sbjct: 860 MEAQQAQKS 868>NP_653080 Length = 1684 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 MEAQ AQKS Sbjct: 762 MEAQQAQKS 770>XP_005267292 Length = 1677 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 MEAQ AQKS Sbjct: 755 MEAQQAQKS 763>XP_005267291 Length = 1684 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 MEAQ AQKS Sbjct: 762 MEAQQAQKS 770>XP_005267290 Length = 1782 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 MEAQ AQKS Sbjct: 860 MEAQQAQKS 868>NP_997203 Length = 288 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 MEA++AQK Sbjct: 51 MEAEMAQK 58>NP_037528 Length = 1055 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EAQLAQKS 9 +AQLAQK+ Sbjct: 704 DAQLAQKA 711>NP_001269970 Length = 1125 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EAQLAQKS 9 +AQLAQK+ Sbjct: 704 DAQLAQKA 711>NP_001269971 Length = 1087 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EAQLAQKS 9 +AQLAQK+ Sbjct: 704 DAQLAQKA 711>NP_003651 Length = 1194 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 +EAQLAQ+ Sbjct: 374 IEAQLAQR 381>XP_005261006 Length = 721 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EAQLAQKS 9 +AQLAQK+ Sbjct: 300 DAQLAQKA 307>XP_006724055 Length = 826 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EAQLAQKS 9 +AQLAQK+ Sbjct: 405 DAQLAQKA 412>XP_006723513 Length = 1185 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 +EAQLAQ+ Sbjct: 374 IEAQLAQR 381>NP_057213 Length = 406 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 MEAQLAQ 7 MEAQ+AQ Sbjct: 400 MEAQMAQ 406>NP_004841 Length = 1388 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MEAQLAQKS 9 M+AQ+A++S Sbjct: 1091 MQAQIAEES 1099>XP_006723786 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 MEA+L Q+S Sbjct: 312 MEARLRQRS 320>XP_006723783 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 MEA+L Q+S Sbjct: 367 MEARLRQRS 375>XP_006723781 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 MEA+L Q+S Sbjct: 312 MEARLRQRS 320>XP_006723780 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 MEA+L Q+S Sbjct: 344 MEARLRQRS 352>XP_006723779 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 MEA+L Q+S Sbjct: 367 MEARLRQRS 375>XP_006713311 Length = 939 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MEAQLAQK 8 +EA LAQK Sbjct: 894 LEAHLAQK 901>XP_006713310 Length = 1038 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MEAQLAQK 8 +EA LAQK Sbjct: 993 LEAHLAQK 1000>XP_005264819 Length = 1128 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MEAQLAQK 8 +EA LAQK Sbjct: 1106 LEAHLAQK 1113>XP_006713309 Length = 1151 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MEAQLAQK 8 +EA LAQK Sbjct: 1106 LEAHLAQK 1113>XP_005246247 Length = 1417 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 MEAQLAQKS 9 M+AQ+A++S Sbjct: 1091 MQAQIAEES 1099>NP_060763 Length = 581 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MEAQLAQK 8 +EA LAQK Sbjct: 559 LEAHLAQK 566>NP_078789 Length = 1478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 M+AQ+A+K Sbjct: 691 MKAQMAEK 698>NP_588616 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EAQLAQK 8 EAQLAQ+ Sbjct: 923 EAQLAQE 929>NP_001137160 Length = 1054 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EAQLAQK 8 EAQLAQ+ Sbjct: 1006 EAQLAQE 1012>NP_001257863 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MEAQLAQK 8 +EA LAQK Sbjct: 529 LEATLAQK 536>NP_055605 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MEAQLAQK 8 +EA LAQK Sbjct: 529 LEATLAQK 536>NP_001257870 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MEAQLAQK 8 +EA LAQK Sbjct: 529 LEATLAQK 536>NP_001269211 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MEAQLAQK 8 +EA LAQK Sbjct: 487 LEATLAQK 494>NP_006176 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 ++AQL+QK Sbjct: 1596 LQAQLSQK 1603>NP_002069 Length = 2230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 ++ QLAQK+ Sbjct: 2108 LQTQLAQKT 2116>NP_001273490 Length = 2101 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 ++AQL+QK Sbjct: 1582 LQAQLSQK 1589>XP_005254204 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EAQLAQK 8 EAQLAQ+ Sbjct: 923 EAQLAQE 929>XP_005254202 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EAQLAQK 8 EAQLAQ+ Sbjct: 923 EAQLAQE 929>XP_005254201 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EAQLAQK 8 EAQLAQ+ Sbjct: 989 EAQLAQE 995>XP_006718633 Length = 2101 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 ++AQL+QK Sbjct: 1582 LQAQLSQK 1589>XP_006718632 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 ++AQL+QK Sbjct: 1596 LQAQLSQK 1603>XP_006718631 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 ++AQL+QK Sbjct: 1596 LQAQLSQK 1603>XP_006718630 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 ++AQL+QK Sbjct: 1596 LQAQLSQK 1603>XP_006718629 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 ++AQL+QK Sbjct: 1596 LQAQLSQK 1603>XP_006718628 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 ++AQL+QK Sbjct: 1596 LQAQLSQK 1603>XP_006718627 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 ++AQL+QK Sbjct: 1596 LQAQLSQK 1603>XP_006718626 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 ++AQL+QK Sbjct: 1596 LQAQLSQK 1603>XP_006718625 Length = 2115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 ++AQL+QK Sbjct: 1596 LQAQLSQK 1603>XP_005265541 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 M+AQ+A+K Sbjct: 691 MKAQMAEK 698>XP_006713398 Length = 1478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 M+AQ+A+K Sbjct: 691 MKAQMAEK 698>XP_006713397 Length = 1478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 M+AQ+A+K Sbjct: 691 MKAQMAEK 698>XP_006713396 Length = 1478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MEAQLAQK 8 M+AQ+A+K Sbjct: 691 MKAQMAEK 698>XP_005265132 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 ++ QLAQK+ Sbjct: 2092 LQTQLAQKT 2100>XP_006713173 Length = 2250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 ++ QLAQK+ Sbjct: 2128 LQTQLAQKT 2136>XP_005265130 Length = 2252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 ++ QLAQK+ Sbjct: 2130 LQTQLAQKT 2138>XP_005265129 Length = 2269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 ++ QLAQK+ Sbjct: 2147 LQTQLAQKT 2155>XP_005265127 Length = 2283 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 ++ QLAQK+ Sbjct: 2163 LQTQLAQKT 2171>XP_005265126 Length = 2285 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 MEAQLAQKS 9 ++ QLAQK+ Sbjct: 2163 LQTQLAQKT 2171Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.102 0.221 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 288,455 Number of extensions: 566 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |