Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 20 299 XP_006714104 20 299 XP_005265800 20 299 XP_006714103 20 299 XP_006714102 20 299 NP_001075019 17 3301 XP_006724836 17 3301 XP_005262507 17 3301 XP_006724835 17 3301 XP_006724834 17 3301 XP_006724833 17 3301 XP_006724832 17 3301 XP_006724831 17 3301 XP_006724830 17 3301 XP_005262504 17 3301 XP_006719124 17 3301 XP_005253405 17 3301 NP_777601 17 3301 NP_001073937 17 4312 NP_001155899 16 5631 NP_000359 16 5631 NP_001155898 16 5631 XP_006717334 16 5631 XP_005272268 16 5631 NP_002213 16 7355 NP_001093422 16 7355 NP_001161744 16 7355 NP_620130 16 7355 XP_006719005 16 7355 XP_005271789 16 7355 XP_005271787 16 7355 XP_005271786 16 7355 XP_005271785 16 7355 XP_005271784 16 7355 XP_006713199 16 7355 XP_006713198 16 7355 XP_006713197 16 7355 XP_005265167 16 7355 XP_006713196 16 7355 XP_006713195 16 7355 XP_005265166 16 7355 XP_006713194 16 7355 NP_004235 15 9605 NP_981961 15 9605 NP_001162588 15 9605 NP_001162589 15 9605 NP_065911 15 9605 NP_001753 15 9605 NP_001009186 15 9605 NP_003156 15 9605 NP_689528 15 9605 NP_001029025 15 9605 NP_000958 15 9605 XP_005253586 15 9605 XP_005253585 15 9605 XP_006718828 15 9605>NP_006197 Length = 1089 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MDMKHADTT 9 MDMK ADTT Sbjct: 732 MDMKQADTT 740>XP_006714104 Length = 832 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MDMKHADTT 9 MDMK ADTT Sbjct: 757 MDMKQADTT 765>XP_005265800 Length = 1089 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MDMKHADTT 9 MDMK ADTT Sbjct: 732 MDMKQADTT 740>XP_006714103 Length = 1111 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MDMKHADTT 9 MDMK ADTT Sbjct: 754 MDMKQADTT 762>XP_006714102 Length = 1114 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MDMKHADTT 9 MDMK ADTT Sbjct: 757 MDMKQADTT 765>NP_001075019 Length = 1593 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MKHADTT 9 MKH DTT Sbjct: 628 MKHDDTT 634>XP_006724836 Length = 1582 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MKHADTT 9 MKH DTT Sbjct: 628 MKHDDTT 634>XP_005262507 Length = 1594 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MKHADTT 9 MKH DTT Sbjct: 628 MKHDDTT 634>XP_006724835 Length = 1615 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MKHADTT 9 MKH DTT Sbjct: 628 MKHDDTT 634>XP_006724834 Length = 1615 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MKHADTT 9 MKH DTT Sbjct: 628 MKHDDTT 634>XP_006724833 Length = 1620 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MKHADTT 9 MKH DTT Sbjct: 628 MKHDDTT 634>XP_006724832 Length = 1640 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MKHADTT 9 MKH DTT Sbjct: 628 MKHDDTT 634>XP_006724831 Length = 1640 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MKHADTT 9 MKH DTT Sbjct: 628 MKHDDTT 634>XP_006724830 Length = 1642 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MKHADTT 9 MKH DTT Sbjct: 628 MKHDDTT 634>XP_005262504 Length = 1642 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MKHADTT 9 MKH DTT Sbjct: 628 MKHDDTT 634>XP_006719124 Length = 1047 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MDMKHADT 8 +++KHADT Sbjct: 818 VEVKHADT 825>XP_005253405 Length = 1463 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MDMKHADT 8 +++KHADT Sbjct: 818 VEVKHADT 825>NP_777601 Length = 1453 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 MDMKHADT 8 +++KHADT Sbjct: 808 VEVKHADT 815>NP_001073937 Length = 134 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DMKHADTT 9 D+KH+D T Sbjct: 28 DLKHSDGT 35>NP_001155899 Length = 1113 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KHADTT 9 KH+DTT Sbjct: 818 KHSDTT 823>NP_000359 Length = 1164 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KHADTT 9 KH+DTT Sbjct: 869 KHSDTT 874>NP_001155898 Length = 1163 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KHADTT 9 KH+DTT Sbjct: 868 KHSDTT 873>XP_006717334 Length = 1164 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KHADTT 9 KH+DTT Sbjct: 869 KHSDTT 874>XP_005272268 Length = 1164 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KHADTT 9 KH+DTT Sbjct: 869 KHSDTT 874>NP_002213 Length = 2695 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DMKHADT 8 D KHAD+ Sbjct: 1452 DRKHADS 1458>NP_001093422 Length = 2710 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DMKHADT 8 D KHAD+ Sbjct: 1467 DRKHADS 1473>NP_001161744 Length = 2743 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DMKHADT 8 D KHAD+ Sbjct: 1461 DRKHADS 1467>NP_620130 Length = 664 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 MDMKHAD 7 MD KH D Sbjct: 260 MDFKHPD 266>XP_006719005 Length = 348 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 MDMKHAD 7 MD KH D Sbjct: 263 MDFKHPD 269>XP_005271789 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 MDMKHAD 7 MD KH D Sbjct: 263 MDFKHPD 269>XP_005271787 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 MDMKHAD 7 MD KH D Sbjct: 8 MDFKHPD 14>XP_005271786 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 MDMKHAD 7 MD KH D Sbjct: 123 MDFKHPD 129>XP_005271785 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 MDMKHAD 7 MD KH D Sbjct: 123 MDFKHPD 129>XP_005271784 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 MDMKHAD 7 MD KH D Sbjct: 263 MDFKHPD 269>XP_006713199 Length = 2695 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DMKHADT 8 D KHAD+ Sbjct: 1476 DRKHADS 1482>XP_006713198 Length = 2699 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DMKHADT 8 D KHAD+ Sbjct: 1476 DRKHADS 1482>XP_006713197 Length = 2712 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DMKHADT 8 D KHAD+ Sbjct: 1452 DRKHADS 1458>XP_005265167 Length = 2719 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DMKHADT 8 D KHAD+ Sbjct: 1476 DRKHADS 1482>XP_006713196 Length = 2721 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DMKHADT 8 D KHAD+ Sbjct: 1461 DRKHADS 1467>XP_006713195 Length = 2727 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DMKHADT 8 D KHAD+ Sbjct: 1467 DRKHADS 1473>XP_005265166 Length = 2735 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DMKHADT 8 D KHAD+ Sbjct: 1476 DRKHADS 1482>XP_006713194 Length = 2736 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DMKHADT 8 D KHAD+ Sbjct: 1476 DRKHADS 1482>NP_004235 Length = 1156 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MDMKHADT 8 +++KH DT Sbjct: 491 VEVKHGDT 498>NP_981961 Length = 1121 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MDMKHADT 8 +++KH DT Sbjct: 491 VEVKHGDT 498>NP_001162588 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DMKHADTT 9 DMK+ D T Sbjct: 99 DMKYKDAT 106>NP_001162589 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DMKHADTT 9 DMK+ D T Sbjct: 99 DMKYKDAT 106>NP_065911 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DMKHADTT 9 DMK+ D T Sbjct: 99 DMKYKDAT 106>NP_001753 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 MDMKHADTT 9 M+MKH T Sbjct: 194 MEMKHKSET 202>NP_001009186 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 MDMKHADTT 9 M+MKH T Sbjct: 149 MEMKHKSET 157>NP_003156 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 MDMKHAD 7 MD++H D Sbjct: 580 MDLRHPD 586>NP_689528 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 DMKHADTT 9 D KH D T Sbjct: 146 DRKHIDVT 153>NP_001029025 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MDMKHADTT 9 +D+K DTT Sbjct: 314 IDLKFIDTT 322>NP_000958 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MDMKHADTT 9 +D+K DTT Sbjct: 363 IDLKFIDTT 371>XP_005253586 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MDMKHADT 8 +++KH DT Sbjct: 491 VEVKHGDT 498>XP_005253585 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MDMKHADT 8 +++KH DT Sbjct: 491 VEVKHGDT 498>XP_006718828 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 DMKHADTT 9 D KH D T Sbjct: 4 DRKHIDVT 11Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.116 0.335 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 573,463 Number of extensions: 730 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |